RNA–Protein interactions for RNA: ENST00000504047.1

ATXN3-208, Transcript of ataxin 3, humanhuman

TSL 3

Gene ATXN3, Length 426 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-208ENST00000504047 WTIPA6NIX2 430 aaPredicted RBP4.83□□□□□ -1.64
ATXN3-208ENST00000504047 U2SURPO15042 1029 aaKnown RBP4.83□□□□□ -1.64
ATXN3-208ENST00000504047 NRDCO43847 1150 aa4.83□□□□□ -1.64
ATXN3-208ENST00000504047 USP2O75604 605 aaPredicted RBP4.83□□□□□ -1.64
ATXN3-208ENST00000504047 TBC1D8O95759 1140 aa4.83□□□□□ -1.64
ATXN3-208ENST00000504047 RTP1P59025 263 aa4.83□□□□□ -1.64
ATXN3-208ENST00000504047 HLA-DQA1Q5Y7H0 255 aa4.83□□□□□ -1.64
ATXN3-208ENST00000504047 GALNT18Q6P9A2 607 aa4.83□□□□□ -1.64
ATXN3-208ENST00000504047 ZPBP2Q6X784 338 aa4.83□□□□□ -1.64
ATXN3-208ENST00000504047 ARHGEF39Q8N4T4 335 aa4.83□□□□□ -1.64
ATXN3-208ENST00000504047 BVESQ8NE79 360 aa4.83□□□□□ -1.64
ATXN3-208ENST00000504047 G6PC3Q9BUM1 346 aa4.83□□□□□ -1.64
ATXN3-208ENST00000504047 C19orf44Q9H6X5 657 aa4.83□□□□□ -1.64
ATXN3-208ENST00000504047 ERVK13-1Q9NX77 482 aa4.83□□□□□ -1.64
ATXN3-208ENST00000504047 LRP2BPQ9P2M1 347 aa4.83□□□□□ -1.64
ATXN3-208ENST00000504047 CGGBP1Q9UFW8 167 aaPredicted RBP4.83□□□□□ -1.64
ATXN3-208ENST00000504047 TAF6LQ9Y6J9 622 aa4.83□□□□□ -1.64
ATXN3-208ENST00000504047 CARMIL2Q6F5E8 1435 aa4.82□□□□□ -1.64
ATXN3-208ENST00000504047 A0A1W2PQ27 194 aa4.82□□□□□ -1.64
ATXN3-208ENST00000504047 A0A1W2PQ45 241 aaPredicted RBP4.82□□□□□ -1.64
ATXN3-208ENST00000504047 A0A1W2PQ64 194 aa4.82□□□□□ -1.64
ATXN3-208ENST00000504047 A0A1W2PQC6 194 aa4.82□□□□□ -1.64
ATXN3-208ENST00000504047 A0A1W2PQD8 194 aa4.82□□□□□ -1.64
ATXN3-208ENST00000504047 A0A1W2PQY0 241 aa4.82□□□□□ -1.64
ATXN3-208ENST00000504047 LRRC10BA6NIK2 292 aa4.82□□□□□ -1.64
ATXN3-208ENST00000504047 FADS2P1A8MWK0 482 aa4.82□□□□□ -1.64
ATXN3-208ENST00000504047 AGRPO00253 132 aa4.82□□□□□ -1.64
ATXN3-208ENST00000504047 TRHRP34981 398 aaPredicted RBP4.82□□□□□ -1.64
ATXN3-208ENST00000504047 SEPHS1P49903 392 aa4.82□□□□□ -1.64
ATXN3-208ENST00000504047 RBM10P98175 930 aaKnown RBP4.82□□□□□ -1.64
ATXN3-208ENST00000504047 DDR2Q16832 855 aa4.82□□□□□ -1.64
ATXN3-208ENST00000504047 SV2CQ496J9 727 aa4.82□□□□□ -1.64
ATXN3-208ENST00000504047 RTP2Q5QGT7 225 aa4.82□□□□□ -1.64
ATXN3-208ENST00000504047 EEF1DP3Q658K8 133 aa4.82□□□□□ -1.64
ATXN3-208ENST00000504047 JAMLQ86YT9 394 aa4.82□□□□□ -1.64
ATXN3-208ENST00000504047 KSR1Q8IVT5 923 aa4.82□□□□□ -1.64
ATXN3-208ENST00000504047 ARMC5Q96C12 935 aa4.82□□□□□ -1.64
ATXN3-208ENST00000504047 HHIPL1Q96JK4 782 aa4.82□□□□□ -1.64
ATXN3-208ENST00000504047 FCRL3Q96P31 734 aaPredicted RBP4.82□□□□□ -1.64
ATXN3-208ENST00000504047 FMNL2Q96PY5 1086 aa4.82□□□□□ -1.64
ATXN3-208ENST00000504047 HIRIP3Q9BW71 556 aaPredicted RBP4.82□□□□□ -1.64
ATXN3-208ENST00000504047 SLC6A17Q9H1V8 727 aa4.82□□□□□ -1.64
ATXN3-208ENST00000504047 EPN3Q9H201 632 aa4.82□□□□□ -1.64
ATXN3-208ENST00000504047 SUSD2Q9UGT4 822 aa4.82□□□□□ -1.64
ATXN3-208ENST00000504047 EBF1Q9UH73 591 aa4.82□□□□□ -1.64
ATXN3-208ENST00000504047 GPR55Q9Y2T6 319 aaPredicted RBP4.82□□□□□ -1.64
ATXN3-208ENST00000504047 TRBV23OR9-2A0A075B6M9 112 aa4.81□□□□□ -1.64
ATXN3-208ENST00000504047 ZNF503-AS2A6NEH8 195 aa4.81□□□□□ -1.64
ATXN3-208ENST00000504047 B2RBV5 119 aa4.81□□□□□ -1.64
ATXN3-208ENST00000504047 AURKAO14965 403 aa4.81□□□□□ -1.64
ATXN3-208ENST00000504047 SUSD5O60279 629 aa4.81□□□□□ -1.64
ATXN3-208ENST00000504047 VAMP4O75379 141 aa4.81□□□□□ -1.64
ATXN3-208ENST00000504047 KCNH1O95259 989 aa4.81□□□□□ -1.64
ATXN3-208ENST00000504047 GJB6O95452 261 aa4.81□□□□□ -1.64
ATXN3-208ENST00000504047 IFNGR1P15260 489 aa4.81□□□□□ -1.64
ATXN3-208ENST00000504047 GTF2F1P35269 517 aaKnown RBP eCLIP4.81□□□□□ -1.64
ATXN3-208ENST00000504047 ARL4AP40617 200 aa4.81□□□□□ -1.64
ATXN3-208ENST00000504047 RAB33AQ14088 237 aa4.81□□□□□ -1.64
ATXN3-208ENST00000504047 MLANAQ16655 118 aa4.81□□□□□ -1.64
ATXN3-208ENST00000504047 DPY19L1Q2PZI1 675 aa4.81□□□□□ -1.64
ATXN3-208ENST00000504047 RCSD1Q6JBY9 416 aa4.81□□□□□ -1.64
ATXN3-208ENST00000504047 RNF32Q9H0A6 362 aa4.81□□□□□ -1.64
ATXN3-208ENST00000504047 CRTAC1Q9NQ79 661 aa4.81□□□□□ -1.64
ATXN3-208ENST00000504047 ST7Q9NRC1 585 aa4.81□□□□□ -1.64
ATXN3-208ENST00000504047 APEX2Q9UBZ4 518 aa4.81□□□□□ -1.64
ATXN3-208ENST00000504047 EMC9Q9Y3B6 208 aa4.81□□□□□ -1.64
ATXN3-208ENST00000504047 BACE2Q9Y5Z0 518 aa4.81□□□□□ -1.64
ATXN3-208ENST00000504047 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.81□□□□□ -1.64
ATXN3-208ENST00000504047 C2orf71A6NGG8 1288 aa4.8□□□□□ -1.64
ATXN3-208ENST00000504047 STXBP3O00186 592 aa4.8□□□□□ -1.64
ATXN3-208ENST00000504047 FGF10O15520 208 aaPredicted RBP4.8□□□□□ -1.64
ATXN3-208ENST00000504047 KLF4O43474 513 aa4.8□□□□□ -1.64
ATXN3-208ENST00000504047 PSPNO60542 156 aa4.8□□□□□ -1.64
ATXN3-208ENST00000504047 PDE6BP35913 854 aa4.8□□□□□ -1.64
ATXN3-208ENST00000504047 HSF5Q4G112 596 aaPredicted RBP4.8□□□□□ -1.64
ATXN3-208ENST00000504047 TIGD5Q53EQ6 642 aa4.8□□□□□ -1.64
ATXN3-208ENST00000504047 NBPF6Q5VWK0 638 aa4.8□□□□□ -1.64
ATXN3-208ENST00000504047 SLCO6A1Q86UG4 719 aa4.8□□□□□ -1.64
ATXN3-208ENST00000504047 IRF2BP1Q8IU81 584 aa4.8□□□□□ -1.64
ATXN3-208ENST00000504047 LIN37Q96GY3 246 aaPredicted RBP4.8□□□□□ -1.64
ATXN3-208ENST00000504047 NBPF4Q96M43 638 aa4.8□□□□□ -1.64
ATXN3-208ENST00000504047 PTCHD1Q96NR3 888 aa4.8□□□□□ -1.64
ATXN3-208ENST00000504047 SLC38A3Q99624 504 aa4.8□□□□□ -1.64
ATXN3-208ENST00000504047 SP110Q9HB58 689 aa4.8□□□□□ -1.64
ATXN3-208ENST00000504047 YBX2Q9Y2T7 364 aaKnown RBP4.8□□□□□ -1.64
ATXN3-208ENST00000504047 A0A1W2PQJ5 194 aa4.79□□□□□ -1.64
ATXN3-208ENST00000504047 FARP2O94887 1054 aaPredicted RBP4.79□□□□□ -1.64
ATXN3-208ENST00000504047 PNLIPP16233 465 aa4.79□□□□□ -1.64
ATXN3-208ENST00000504047 PAMP19021 973 aa4.79□□□□□ -1.64
ATXN3-208ENST00000504047 LAPTM5Q13571 262 aa4.79□□□□□ -1.64
ATXN3-208ENST00000504047 SOGA3Q5TF21 947 aa4.79□□□□□ -1.64
ATXN3-208ENST00000504047 OGFOD2Q6N063 350 aa4.79□□□□□ -1.64
ATXN3-208ENST00000504047 NLRX1Q86UT6 975 aa4.79□□□□□ -1.64
ATXN3-208ENST00000504047 TRIM59Q8IWR1 403 aa4.79□□□□□ -1.64
ATXN3-208ENST00000504047 SIRT2Q8IXJ6 389 aa4.79□□□□□ -1.64
ATXN3-208ENST00000504047 CELF2-AS1Q8N7Q2 184 aa4.79□□□□□ -1.64
ATXN3-208ENST00000504047 ZNF513Q8N8E2 541 aaPredicted RBP4.79□□□□□ -1.64
ATXN3-208ENST00000504047 NUP43Q8NFH3 380 aa4.79□□□□□ -1.64
ATXN3-208ENST00000504047 MICAL1Q8TDZ2 1067 aa4.79□□□□□ -1.64
ATXN3-208ENST00000504047 INTS4Q96HW7 963 aaKnown RBP4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms