RNA–Protein interactions for RNA: ENST00000503942.1

UBE3D-205, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 3

Gene UBE3D, Length 646 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-205ENST00000503942 C8orf37Q96NL8 207 aa7.07□□□□□ -1.28
UBE3D-205ENST00000503942 TNFRSF12AQ9NP84 129 aa7.07□□□□□ -1.28
UBE3D-205ENST00000503942 ADAMTS1Q9UHI8 967 aa7.07□□□□□ -1.28
UBE3D-205ENST00000503942 CNOT11Q9UKZ1 510 aaKnown RBP7.07□□□□□ -1.28
UBE3D-205ENST00000503942 MYRFQ9Y2G1 1151 aa7.07□□□□□ -1.28
UBE3D-205ENST00000503942 GPR55Q9Y2T6 319 aaPredicted RBP7.07□□□□□ -1.28
UBE3D-205ENST00000503942 WTIPA6NIX2 430 aaPredicted RBP7.06□□□□□ -1.28
UBE3D-205ENST00000503942 MINDY4BA8MYZ0 360 aa7.06□□□□□ -1.28
UBE3D-205ENST00000503942 RGS13O14921 159 aa7.06□□□□□ -1.28
UBE3D-205ENST00000503942 BUB1BO60566 1050 aaPredicted RBP7.06□□□□□ -1.28
UBE3D-205ENST00000503942 GARTP22102 1010 aa7.06□□□□□ -1.28
UBE3D-205ENST00000503942 GBP1P32455 592 aa7.06□□□□□ -1.28
UBE3D-205ENST00000503942 CAMK2GQ13555 558 aaPredicted RBP7.06□□□□□ -1.28
UBE3D-205ENST00000503942 PWP1Q13610 501 aa7.06□□□□□ -1.28
UBE3D-205ENST00000503942 PUM1Q14671 1186 aaKnown RBP eCLIP7.06□□□□□ -1.28
UBE3D-205ENST00000503942 NBPF9Q3BBW0 867 aa7.06□□□□□ -1.28
UBE3D-205ENST00000503942 ZFYVE27Q5T4F4 411 aa7.06□□□□□ -1.28
UBE3D-205ENST00000503942 TINF2Q9BSI4 451 aa7.06□□□□□ -1.28
UBE3D-205ENST00000503942 CCSER2Q9H7U1 834 aa7.06□□□□□ -1.28
UBE3D-205ENST00000503942 NUDT19A8MXV4 375 aa7.05□□□□□ -1.28
UBE3D-205ENST00000503942 GRIN3BO60391 1043 aa7.05□□□□□ -1.28
UBE3D-205ENST00000503942 UBOX5O94941 541 aa7.05□□□□□ -1.28
UBE3D-205ENST00000503942 IGFBP6P24592 240 aaPredicted RBP7.05□□□□□ -1.28
UBE3D-205ENST00000503942 KCNC1P48547 511 aa7.05□□□□□ -1.28
UBE3D-205ENST00000503942 SLURP1P55000 103 aa7.05□□□□□ -1.28
UBE3D-205ENST00000503942 NCKAP1LP55160 1127 aa7.05□□□□□ -1.28
UBE3D-205ENST00000503942 CBX2Q14781 532 aaPredicted RBP7.05□□□□□ -1.28
UBE3D-205ENST00000503942 NAALADL2Q58DX5 795 aa7.05□□□□□ -1.28
UBE3D-205ENST00000503942 KCNQ5Q9NR82 932 aa7.05□□□□□ -1.28
UBE3D-205ENST00000503942 PRAMEF1O95521 474 aa7.04□□□□□ -1.28
UBE3D-205ENST00000503942 PF4P02776 101 aa7.04□□□□□ -1.28
UBE3D-205ENST00000503942 EIF4A3P38919 411 aaKnown RBP7.04□□□□□ -1.28
UBE3D-205ENST00000503942 FAM160A1Q05DH4 1040 aa7.04□□□□□ -1.28
UBE3D-205ENST00000503942 SNW1Q13573 536 aaKnown RBP7.04□□□□□ -1.28
UBE3D-205ENST00000503942 FBXL19Q6PCT2 694 aa7.04□□□□□ -1.28
UBE3D-205ENST00000503942 SLCO6A1Q86UG4 719 aa7.04□□□□□ -1.28
UBE3D-205ENST00000503942 ERVK13-1Q9NX77 482 aa7.04□□□□□ -1.28
UBE3D-205ENST00000503942 IRS2Q9Y4H2 1338 aa7.03□□□□□ -1.28
UBE3D-205ENST00000503942 GREM1O60565 184 aa7.03□□□□□ -1.28
UBE3D-205ENST00000503942 PRKCAP17252 672 aa7.03□□□□□ -1.28
UBE3D-205ENST00000503942 PLEKHN1Q494U1 663 aaPredicted RBP7.03□□□□□ -1.28
UBE3D-205ENST00000503942 NBPF12Q5TAG4 269 aaPredicted RBP7.03□□□□□ -1.28
UBE3D-205ENST00000503942 RPTNQ6XPR3 784 aa7.03□□□□□ -1.28
UBE3D-205ENST00000503942 ZNF296Q8WUU4 475 aaPredicted RBP7.03□□□□□ -1.28
UBE3D-205ENST00000503942 CAPN10Q9HC96 672 aa7.03□□□□□ -1.28
UBE3D-205ENST00000503942 ACSL6Q9UKU0 697 aa7.03□□□□□ -1.28
UBE3D-205ENST00000503942 K7ESM1 405 aa7.02□□□□□ -1.29
UBE3D-205ENST00000503942 SIGLEC6O43699 453 aa7.02□□□□□ -1.29
UBE3D-205ENST00000503942 ENDOUP21128 410 aaKnown RBP7.02□□□□□ -1.29
UBE3D-205ENST00000503942 LIMS1P48059 325 aa7.02□□□□□ -1.29
UBE3D-205ENST00000503942 GJA8P48165 433 aa7.02□□□□□ -1.29
UBE3D-205ENST00000503942 CEBPAP49715 358 aaPredicted RBP7.02□□□□□ -1.29
UBE3D-205ENST00000503942 CYP4F8P98187 520 aa7.02□□□□□ -1.29
UBE3D-205ENST00000503942 PAK2Q13177 524 aa7.02□□□□□ -1.29
UBE3D-205ENST00000503942 NLGN1Q8N2Q7 840 aa7.02□□□□□ -1.29
UBE3D-205ENST00000503942 EAF1Q96JC9 268 aaPredicted RBP7.02□□□□□ -1.29
UBE3D-205ENST00000503942 GPR20Q99678 358 aa7.02□□□□□ -1.29
UBE3D-205ENST00000503942 SPON2Q9BUD6 331 aa7.02□□□□□ -1.29
UBE3D-205ENST00000503942 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.02□□□□□ -1.29
UBE3D-205ENST00000503942 A0A1W2PQ45 241 aaPredicted RBP7.01□□□□□ -1.29
UBE3D-205ENST00000503942 A0A1W2PQY0 241 aa7.01□□□□□ -1.29
UBE3D-205ENST00000503942 VWA3BQ502W6 1294 aa7.01□□□□□ -1.29
UBE3D-205ENST00000503942 REC114Q7Z4M0 266 aa7.01□□□□□ -1.29
UBE3D-205ENST00000503942 KIAA0825Q8IV33 1275 aa7.01□□□□□ -1.29
UBE3D-205ENST00000503942 NUP43Q8NFH3 380 aa7.01□□□□□ -1.29
UBE3D-205ENST00000503942 INPP5FQ9Y2H2 1132 aa7.01□□□□□ -1.29
UBE3D-205ENST00000503942 RAG1P15918 1043 aa7□□□□□ -1.29
UBE3D-205ENST00000503942 PFKLP17858 780 aa7□□□□□ -1.29
UBE3D-205ENST00000503942 MAPKAPK2P49137 400 aa7□□□□□ -1.29
UBE3D-205ENST00000503942 MPP2Q14168 576 aa7□□□□□ -1.29
UBE3D-205ENST00000503942 ZNF827Q17R98 1081 aa7□□□□□ -1.29
UBE3D-205ENST00000503942 ARSHQ5FYA8 562 aa7□□□□□ -1.29
UBE3D-205ENST00000503942 UBXN11Q5T124 520 aa7□□□□□ -1.29
UBE3D-205ENST00000503942 SLC43A3Q8NBI5 491 aa7□□□□□ -1.29
UBE3D-205ENST00000503942 GOLM1Q8NBJ4 401 aa7□□□□□ -1.29
UBE3D-205ENST00000503942 PRDM14Q9GZV8 571 aa7□□□□□ -1.29
UBE3D-205ENST00000503942 PALD1Q9ULE6 856 aa7□□□□□ -1.29
UBE3D-205ENST00000503942 ZNF205O95201 554 aa6.99□□□□□ -1.29
UBE3D-205ENST00000503942 MSL3P1P0C860 447 aa6.99□□□□□ -1.29
UBE3D-205ENST00000503942 CRKP46108 304 aa6.99□□□□□ -1.29
UBE3D-205ENST00000503942 ZNF200P98182 395 aaPredicted RBP6.99□□□□□ -1.29
UBE3D-205ENST00000503942 MLECQ14165 292 aa6.99□□□□□ -1.29
UBE3D-205ENST00000503942 SNAP47Q5SQN1 464 aa6.99□□□□□ -1.29
UBE3D-205ENST00000503942 ZC3H14Q6PJT7 736 aaKnown RBP6.99□□□□□ -1.29
UBE3D-205ENST00000503942 LIPIQ6XZB0 460 aa6.99□□□□□ -1.29
UBE3D-205ENST00000503942 FAM196AQ6ZSG2 479 aa6.99□□□□□ -1.29
UBE3D-205ENST00000503942 FBXO27Q8NI29 283 aa6.99□□□□□ -1.29
UBE3D-205ENST00000503942 RASGRP4Q8TDF6 673 aa6.99□□□□□ -1.29
UBE3D-205ENST00000503942 NT5C1AQ9BXI3 368 aa6.99□□□□□ -1.29
UBE3D-205ENST00000503942 CHST7Q9NS84 486 aa6.99□□□□□ -1.29
UBE3D-205ENST00000503942 UBP1Q9NZI7 540 aa6.99□□□□□ -1.29
UBE3D-205ENST00000503942 IMPACTQ9P2X3 320 aa6.99□□□□□ -1.29
UBE3D-205ENST00000503942 MINPP1Q9UNW1 487 aa6.99□□□□□ -1.29
UBE3D-205ENST00000503942 SUPT16HQ9Y5B9 1047 aaKnown RBP6.99□□□□□ -1.29
UBE3D-205ENST00000503942 IGSF3O75054 1194 aa6.98□□□□□ -1.29
UBE3D-205ENST00000503942 TNFRSF1AP19438 455 aa6.98□□□□□ -1.29
UBE3D-205ENST00000503942 FBLN1P23142 703 aa6.98□□□□□ -1.29
UBE3D-205ENST00000503942 BMP8BP34820 402 aa6.98□□□□□ -1.29
UBE3D-205ENST00000503942 NR1I3Q14994 352 aa6.98□□□□□ -1.29
UBE3D-205ENST00000503942 GPRASP2Q96D09 838 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms