RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 GALNT17Q6IS24 598 aa11.11□□□□□ -0.63
CLIP1-204ENST00000501271 C16orf86Q6ZW13 317 aa11.11□□□□□ -0.63
CLIP1-204ENST00000501271 IRF2BP1Q8IU81 584 aa11.11□□□□□ -0.63
CLIP1-204ENST00000501271 CREBRFQ8IUR6 639 aa11.11□□□□□ -0.63
CLIP1-204ENST00000501271 ADSSL1Q8N142 457 aa11.11□□□□□ -0.63
CLIP1-204ENST00000501271 RASSF8Q8NHQ8 419 aa11.11□□□□□ -0.63
CLIP1-204ENST00000501271 EYA3Q99504 573 aa11.11□□□□□ -0.63
CLIP1-204ENST00000501271 CD209Q9NNX6 404 aa11.11□□□□□ -0.63
CLIP1-204ENST00000501271 ABHD10Q9NUJ1 306 aa11.11□□□□□ -0.63
CLIP1-204ENST00000501271 FHOD1Q9Y613 1164 aa11.11□□□□□ -0.63
CLIP1-204ENST00000501271 FLT1P17948 1338 aa11.11□□□□□ -0.63
CLIP1-204ENST00000501271 TOM1O60784 492 aa11.11□□□□□ -0.63
CLIP1-204ENST00000501271 LDHCP07864 332 aa11.11□□□□□ -0.63
CLIP1-204ENST00000501271 FNBP4Q8N3X1 1017 aaPredicted RBP11.11□□□□□ -0.63
CLIP1-204ENST00000501271 ACRBPQ8NEB7 543 aa11.11□□□□□ -0.63
CLIP1-204ENST00000501271 CCDC51Q96ER9 411 aa11.11□□□□□ -0.63
CLIP1-204ENST00000501271 SPZ1Q9BXG8 430 aa11.11□□□□□ -0.63
CLIP1-204ENST00000501271 CCSER1Q9C0I3 900 aa11.11□□□□□ -0.63
CLIP1-204ENST00000501271 ZMYND12Q9H0C1 365 aa11.11□□□□□ -0.63
CLIP1-204ENST00000501271 GPR75-ASB3A0A0A6YYF3 556 aa11.1□□□□□ -0.63
CLIP1-204ENST00000501271 UBA7P41226 1012 aa11.1□□□□□ -0.63
CLIP1-204ENST00000501271 NAPAP54920 295 aa11.1□□□□□ -0.63
CLIP1-204ENST00000501271 USP17L2Q6R6M4 530 aa11.1□□□□□ -0.63
CLIP1-204ENST00000501271 TEX11Q8IYF3 940 aa11.1□□□□□ -0.63
CLIP1-204ENST00000501271 RPGRQ92834 1020 aaKnown RBP11.1□□□□□ -0.63
CLIP1-204ENST00000501271 ST7Q9NRC1 585 aa11.1□□□□□ -0.63
CLIP1-204ENST00000501271 KBTBD4Q9NVX7 518 aa11.1□□□□□ -0.63
CLIP1-204ENST00000501271 ZRANB2O95218 330 aaKnown RBP eCLIP11.1□□□□□ -0.63
CLIP1-204ENST00000501271 ABL1P00519 1130 aa11.1□□□□□ -0.63
CLIP1-204ENST00000501271 TPM1P09493 284 aa11.1□□□□□ -0.63
CLIP1-204ENST00000501271 PARP1P09874 1014 aaKnown RBP11.1□□□□□ -0.63
CLIP1-204ENST00000501271 PRPHP41219 470 aa11.1□□□□□ -0.63
CLIP1-204ENST00000501271 RHBDL3P58872 404 aa11.1□□□□□ -0.63
CLIP1-204ENST00000501271 KCNB1Q14721 858 aa11.1□□□□□ -0.63
CLIP1-204ENST00000501271 RSRC2Q7L4I2 434 aaKnown RBP11.1□□□□□ -0.63
CLIP1-204ENST00000501271 NEDD1Q8NHV4 660 aa11.1□□□□□ -0.63
CLIP1-204ENST00000501271 NUP88Q99567 741 aaPredicted RBP11.1□□□□□ -0.63
CLIP1-204ENST00000501271 LZTS2Q9BRK4 669 aa11.1□□□□□ -0.63
CLIP1-204ENST00000501271 LRRC4BQ9NT99 713 aa11.1□□□□□ -0.63
CLIP1-204ENST00000501271 USP21Q9UK80 565 aa11.1□□□□□ -0.63
CLIP1-204ENST00000501271 LAD1O00515 517 aa11.09□□□□□ -0.63
CLIP1-204ENST00000501271 PNMA6AP0CW24 399 aaPredicted RBP11.09□□□□□ -0.63
CLIP1-204ENST00000501271 IL1R1P14778 569 aa11.09□□□□□ -0.63
CLIP1-204ENST00000501271 UBXN1Q04323 297 aa11.09□□□□□ -0.63
CLIP1-204ENST00000501271 GABPB1Q06547 395 aaPredicted RBP11.09□□□□□ -0.63
CLIP1-204ENST00000501271 LETM2Q2VYF4 491 aa11.09□□□□□ -0.63
CLIP1-204ENST00000501271 CRY2Q49AN0 593 aa11.09□□□□□ -0.63
CLIP1-204ENST00000501271 TEX35Q5T0J7 233 aa11.09□□□□□ -0.63
CLIP1-204ENST00000501271 ANKRD20A12PQ8NF67 263 aa11.09□□□□□ -0.63
CLIP1-204ENST00000501271 CEP95Q96GE4 821 aa11.09□□□□□ -0.63
CLIP1-204ENST00000501271 ARGLU1Q9NWB6 273 aaPredicted RBP11.09□□□□□ -0.63
CLIP1-204ENST00000501271 ZHX1Q9UKY1 873 aaPredicted RBP11.09□□□□□ -0.63
CLIP1-204ENST00000501271 LTBP1Q14766 1721 aa11.09□□□□□ -0.63
CLIP1-204ENST00000501271 H7C1D1 291 aa11.09□□□□□ -0.63
CLIP1-204ENST00000501271 CCNT1O60563 726 aaKnown RBP11.09□□□□□ -0.63
CLIP1-204ENST00000501271 RHOBTB3O94955 611 aa11.09□□□□□ -0.63
CLIP1-204ENST00000501271 SEC31AO94979 1220 aaKnown RBP11.09□□□□□ -0.63
CLIP1-204ENST00000501271 OR52Z1P0C646 297 aa11.09□□□□□ -0.63
CLIP1-204ENST00000501271 PLCG1P19174 1290 aa11.09□□□□□ -0.63
CLIP1-204ENST00000501271 TRIM14Q14142 442 aa11.09□□□□□ -0.63
CLIP1-204ENST00000501271 BMS1Q14692 1282 aaKnown RBP11.09□□□□□ -0.63
CLIP1-204ENST00000501271 TXNRD1Q16881 649 aa11.09□□□□□ -0.63
CLIP1-204ENST00000501271 MFSD14BQ5SR56 506 aa11.09□□□□□ -0.63
CLIP1-204ENST00000501271 TMTC1Q8IUR5 882 aa11.09□□□□□ -0.63
CLIP1-204ENST00000501271 GIMAP8Q8ND71 665 aaPredicted RBP11.09□□□□□ -0.63
CLIP1-204ENST00000501271 CERKQ8TCT0 537 aa11.09□□□□□ -0.63
CLIP1-204ENST00000501271 ZNF287Q9HBT7 754 aa11.09□□□□□ -0.63
CLIP1-204ENST00000501271 GGA1Q9UJY5 639 aa11.09□□□□□ -0.63
CLIP1-204ENST00000501271 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.08□□□□□ -0.64
CLIP1-204ENST00000501271 SMCO2A6NFE2 343 aa11.08□□□□□ -0.64
CLIP1-204ENST00000501271 KIF5CO60282 957 aa11.08□□□□□ -0.64
CLIP1-204ENST00000501271 MYL1P05976 194 aa11.08□□□□□ -0.64
CLIP1-204ENST00000501271 ATP2B4P23634 1241 aa11.08□□□□□ -0.64
CLIP1-204ENST00000501271 KRT9P35527 623 aa11.08□□□□□ -0.64
CLIP1-204ENST00000501271 NONOQ15233 471 aaKnown RBP eCLIP11.08□□□□□ -0.64
CLIP1-204ENST00000501271 ZNF569Q5MCW4 686 aa11.08□□□□□ -0.64
CLIP1-204ENST00000501271 TMCO3Q6UWJ1 677 aa11.08□□□□□ -0.64
CLIP1-204ENST00000501271 KRT25Q7Z3Z0 450 aa11.08□□□□□ -0.64
CLIP1-204ENST00000501271 CABP7Q86V35 215 aa11.08□□□□□ -0.64
CLIP1-204ENST00000501271 PIGSQ96S52 555 aa11.08□□□□□ -0.64
CLIP1-204ENST00000501271 LGALS16A8MUM7 142 aa11.08□□□□□ -0.64
CLIP1-204ENST00000501271 TTI2Q6NXR4 508 aa11.08□□□□□ -0.64
CLIP1-204ENST00000501271 CYP26C1Q6V0L0 522 aa11.08□□□□□ -0.64
CLIP1-204ENST00000501271 CERS3Q8IU89 383 aa11.08□□□□□ -0.64
CLIP1-204ENST00000501271 GPR161Q8N6U8 529 aaKnown RBP11.08□□□□□ -0.64
CLIP1-204ENST00000501271 RRP36Q96EU6 259 aaKnown RBP11.08□□□□□ -0.64
CLIP1-204ENST00000501271 TRIM47Q96LD4 638 aa11.08□□□□□ -0.64
CLIP1-204ENST00000501271 VAT1LQ9HCJ6 419 aa11.08□□□□□ -0.64
CLIP1-204ENST00000501271 POLLQ9UGP5 575 aa11.08□□□□□ -0.64
CLIP1-204ENST00000501271 TTF2Q9UNY4 1162 aaKnown RBP11.08□□□□□ -0.64
CLIP1-204ENST00000501271 LRRC37AA6NMS7 1700 aa11.08□□□□□ -0.64
CLIP1-204ENST00000501271 GAKO14976 1311 aa11.07□□□□□ -0.64
CLIP1-204ENST00000501271 TTC26A0AVF1 554 aa11.07□□□□□ -0.64
CLIP1-204ENST00000501271 USP17L5A8MUK1 530 aa11.07□□□□□ -0.64
CLIP1-204ENST00000501271 GYS1P13807 737 aa11.07□□□□□ -0.64
CLIP1-204ENST00000501271 ARHGAP25P42331 645 aa11.07□□□□□ -0.64
CLIP1-204ENST00000501271 PLA2G4AP47712 749 aa11.07□□□□□ -0.64
CLIP1-204ENST00000501271 NEK8Q86SG6 692 aa11.07□□□□□ -0.64
CLIP1-204ENST00000501271 SLC35F6Q8N357 371 aa11.07□□□□□ -0.64
CLIP1-204ENST00000501271 MB21D1Q8N884 522 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms