RNA–Protein interactions for RNA: ENST00000498043.6

CHRNA4-206, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 5

Gene CHRNA4, Length 2,052 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-206ENST00000498043 KIAA1755Q5JYT7 1200 aa20.33■□□□□ 0.84
CHRNA4-206ENST00000498043 ILDR2Q71H61 639 aa20.33■□□□□ 0.84
CHRNA4-206ENST00000498043 TMX2Q9Y320 296 aa20.33■□□□□ 0.84
CHRNA4-206ENST00000498043 PHF20L1A8MW92 1017 aa20.32■□□□□ 0.84
CHRNA4-206ENST00000498043 TMEM232C9JQI7 657 aa20.32■□□□□ 0.84
CHRNA4-206ENST00000498043 CTAGE5O15320 804 aa20.32■□□□□ 0.84
CHRNA4-206ENST00000498043 EPS15P42566 896 aa20.32■□□□□ 0.84
CHRNA4-206ENST00000498043 PTGDRQ13258 359 aa20.32■□□□□ 0.84
CHRNA4-206ENST00000498043 QRICH1Q2TAL8 776 aa20.32■□□□□ 0.84
CHRNA4-206ENST00000498043 GOPCQ9HD26 462 aa20.32■□□□□ 0.84
CHRNA4-206ENST00000498043 GGA3Q9NZ52 723 aa20.32■□□□□ 0.84
CHRNA4-206ENST00000498043 ASNSP08243 561 aa20.31■□□□□ 0.84
CHRNA4-206ENST00000498043 SNAP25P60880 206 aa20.31■□□□□ 0.84
CHRNA4-206ENST00000498043 NBPF12Q5TAG4 269 aaPredicted RBP20.31■□□□□ 0.84
CHRNA4-206ENST00000498043 PPP1R18Q6NYC8 613 aa20.31■□□□□ 0.84
CHRNA4-206ENST00000498043 ERCC4Q92889 916 aaPredicted RBP20.31■□□□□ 0.84
CHRNA4-206ENST00000498043 SDF4Q9BRK5 362 aa20.31■□□□□ 0.84
CHRNA4-206ENST00000498043 GLIS2Q9BZE0 524 aaPredicted RBP20.31■□□□□ 0.84
CHRNA4-206ENST00000498043 CSRNP2Q9H175 543 aa20.31■□□□□ 0.84
CHRNA4-206ENST00000498043 TMEM260Q9NX78 707 aa20.31■□□□□ 0.84
CHRNA4-206ENST00000498043 BIN2Q9UBW5 565 aaPredicted RBP20.31■□□□□ 0.84
CHRNA4-206ENST00000498043 DDNO94850 711 aaPredicted RBP20.31■□□□□ 0.84
CHRNA4-206ENST00000498043 ATP2C1P98194 919 aaPredicted RBP20.31■□□□□ 0.84
CHRNA4-206ENST00000498043 JAKMIP3Q5VZ66 844 aa20.31■□□□□ 0.84
CHRNA4-206ENST00000498043 KRT25Q7Z3Z0 450 aa20.31■□□□□ 0.84
CHRNA4-206ENST00000498043 MORC2Q9Y6X9 1032 aaPredicted RBP20.31■□□□□ 0.84
CHRNA4-206ENST00000498043 FAM237AA0A1B0GTK4 181 aa20.3■□□□□ 0.84
CHRNA4-206ENST00000498043 NONOQ15233 471 aaKnown RBP eCLIP20.3■□□□□ 0.84
CHRNA4-206ENST00000498043 SYDE2Q5VT97 1194 aa20.3■□□□□ 0.84
CHRNA4-206ENST00000498043 SASS6Q6UVJ0 657 aa20.3■□□□□ 0.84
CHRNA4-206ENST00000498043 APOBEC3FQ8IUX4 373 aaKnown RBP20.3■□□□□ 0.84
CHRNA4-206ENST00000498043 KCNH3Q9ULD8 1083 aa20.3■□□□□ 0.84
CHRNA4-206ENST00000498043 FAM83BQ5T0W9 1011 aa20.3■□□□□ 0.84
CHRNA4-206ENST00000498043 PRAMEF18Q5VWM3 479 aa20.3■□□□□ 0.84
CHRNA4-206ENST00000498043 ZNF579Q8NAF0 562 aaKnown RBP20.3■□□□□ 0.84
CHRNA4-206ENST00000498043 DOCK1Q14185 1865 aa20.29■□□□□ 0.84
CHRNA4-206ENST00000498043 VWA3AA6NCI4 1184 aa20.29■□□□□ 0.84
CHRNA4-206ENST00000498043 FERMT2Q96AC1 680 aa20.29■□□□□ 0.84
CHRNA4-206ENST00000498043 FEZ1Q99689 392 aa20.29■□□□□ 0.84
CHRNA4-206ENST00000498043 SH2D4AQ9H788 454 aa20.29■□□□□ 0.84
CHRNA4-206ENST00000498043 FAM13BQ9NYF5 915 aa20.29■□□□□ 0.84
CHRNA4-206ENST00000498043 HIRAP54198 1017 aaPredicted RBP20.28■□□□□ 0.84
CHRNA4-206ENST00000498043 UBE2SQ16763 222 aa20.28■□□□□ 0.84
CHRNA4-206ENST00000498043 USP49Q70CQ1 688 aa20.28■□□□□ 0.84
CHRNA4-206ENST00000498043 ZNF341Q9BYN7 854 aa20.28■□□□□ 0.84
CHRNA4-206ENST00000498043 VCPKMTQ9H867 229 aa20.28■□□□□ 0.84
CHRNA4-206ENST00000498043 RIC8AQ9NPQ8 531 aa20.28■□□□□ 0.84
CHRNA4-206ENST00000498043 PCDHA1Q9Y5I3 950 aa20.28■□□□□ 0.84
CHRNA4-206ENST00000498043 STAT2P52630 851 aa20.28■□□□□ 0.84
CHRNA4-206ENST00000498043 CUL5Q93034 780 aa20.28■□□□□ 0.84
CHRNA4-206ENST00000498043 LETM2Q2VYF4 491 aa20.27■□□□□ 0.84
CHRNA4-206ENST00000498043 ANO6Q4KMQ2 910 aa20.27■□□□□ 0.84
CHRNA4-206ENST00000498043 C9orf131Q5VYM1 1079 aa20.27■□□□□ 0.84
CHRNA4-206ENST00000498043 TBCKQ8TEA7 893 aa20.27■□□□□ 0.84
CHRNA4-206ENST00000498043 A0A087WWV3 80 aa20.26■□□□□ 0.83
CHRNA4-206ENST00000498043 INPP5BP32019 993 aa20.26■□□□□ 0.83
CHRNA4-206ENST00000498043 USH1GQ495M9 461 aa20.26■□□□□ 0.83
CHRNA4-206ENST00000498043 BTNL9Q6UXG8 535 aa20.26■□□□□ 0.83
CHRNA4-206ENST00000498043 NEK8Q86SG6 692 aa20.26■□□□□ 0.83
CHRNA4-206ENST00000498043 PRR12Q9ULL5 1215 aa20.26■□□□□ 0.83
CHRNA4-206ENST00000498043 FZD1Q9UP38 647 aa20.26■□□□□ 0.83
CHRNA4-206ENST00000498043 TAL1P17542 331 aaPredicted RBP20.26■□□□□ 0.83
CHRNA4-206ENST00000498043 PDILTQ8N807 584 aa20.26■□□□□ 0.83
CHRNA4-206ENST00000498043 SYMPKQ92797 1274 aaKnown RBP20.26■□□□□ 0.83
CHRNA4-206ENST00000498043 EPSTI1Q96J88 318 aa20.26■□□□□ 0.83
CHRNA4-206ENST00000498043 TIGD1Q96MW7 591 aa20.26■□□□□ 0.83
CHRNA4-206ENST00000498043 PSTPIP2Q9H939 334 aa20.26■□□□□ 0.83
CHRNA4-206ENST00000498043 POLR2DO15514 142 aaKnown RBP20.25■□□□□ 0.83
CHRNA4-206ENST00000498043 CCNT1O60563 726 aaKnown RBP20.25■□□□□ 0.83
CHRNA4-206ENST00000498043 CTNND1O60716 968 aaKnown RBP20.25■□□□□ 0.83
CHRNA4-206ENST00000498043 LMOD1P29536 600 aaPredicted RBP20.25■□□□□ 0.83
CHRNA4-206ENST00000498043 IL17AQ16552 155 aa20.25■□□□□ 0.83
CHRNA4-206ENST00000498043 LONRF3Q496Y0 759 aa20.25■□□□□ 0.83
CHRNA4-206ENST00000498043 DCAF15Q66K64 600 aa20.25■□□□□ 0.83
CHRNA4-206ENST00000498043 C4orf32Q8N8J7 132 aa20.25■□□□□ 0.83
CHRNA4-206ENST00000498043 ANP32BQ92688 251 aaKnown RBP20.25■□□□□ 0.83
CHRNA4-206ENST00000498043 AMNQ9BXJ7 453 aa20.25■□□□□ 0.83
CHRNA4-206ENST00000498043 TMEM60Q9H2L4 133 aa20.25■□□□□ 0.83
CHRNA4-206ENST00000498043 SSC5DA1L4H1 1573 aa20.25■□□□□ 0.83
CHRNA4-206ENST00000498043 SAMD1Q6SPF0 538 aaPredicted RBP20.25■□□□□ 0.83
CHRNA4-206ENST00000498043 KRBA2Q6ZNG9 492 aa20.25■□□□□ 0.83
CHRNA4-206ENST00000498043 FBXO11Q86XK2 927 aa20.25■□□□□ 0.83
CHRNA4-206ENST00000498043 CNNM3Q8NE01 707 aa20.25■□□□□ 0.83
CHRNA4-206ENST00000498043 DNAJC25Q9H1X3 360 aa20.25■□□□□ 0.83
CHRNA4-206ENST00000498043 CLK2P49760 499 aaKnown RBP20.24■□□□□ 0.83
CHRNA4-206ENST00000498043 MRPL12P52815 198 aaKnown RBP20.24■□□□□ 0.83
CHRNA4-206ENST00000498043 STX1AQ16623 288 aa20.24■□□□□ 0.83
CHRNA4-206ENST00000498043 WRNIP1Q96S55 665 aa20.24■□□□□ 0.83
CHRNA4-206ENST00000498043 POLR2AP24928 1970 aaKnown RBP20.23■□□□□ 0.83
CHRNA4-206ENST00000498043 ARL6IP4Q66PJ3 421 aaKnown RBP20.23■□□□□ 0.83
CHRNA4-206ENST00000498043 FAM200AQ8TCP9 573 aa20.23■□□□□ 0.83
CHRNA4-206ENST00000498043 KIFC2Q96AC6 838 aa20.23■□□□□ 0.83
CHRNA4-206ENST00000498043 KIAA1468Q9P260 1216 aa20.23■□□□□ 0.83
CHRNA4-206ENST00000498043 A0A087X0B3 334 aa20.23■□□□□ 0.83
CHRNA4-206ENST00000498043 DGKZQ13574 1117 aa20.23■□□□□ 0.83
CHRNA4-206ENST00000498043 ADARB2Q9NS39 739 aaKnown RBP20.23■□□□□ 0.83
CHRNA4-206ENST00000498043 MYH7BA7E2Y1 1941 aa20.22■□□□□ 0.83
CHRNA4-206ENST00000498043 USP17L15C9J2P7 530 aa20.22■□□□□ 0.83
CHRNA4-206ENST00000498043 USP17L13C9JLJ4 530 aa20.22■□□□□ 0.83
CHRNA4-206ENST00000498043 USP17L11C9JVI0 530 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms