RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 A0A1W2PQY0 241 aa7.13□□□□□ -1.27
SMC4-227ENST00000497984 ACRP10323 421 aa7.13□□□□□ -1.27
SMC4-227ENST00000497984 PRKCAP17252 672 aa7.13□□□□□ -1.27
SMC4-227ENST00000497984 LDHDQ86WU2 507 aa7.13□□□□□ -1.27
SMC4-227ENST00000497984 FAM129CQ86XR2 697 aa7.13□□□□□ -1.27
SMC4-227ENST00000497984 CDADC1Q9BWV3 514 aa7.13□□□□□ -1.27
SMC4-227ENST00000497984 PCDHA5Q9Y5H7 936 aa7.13□□□□□ -1.27
SMC4-227ENST00000497984 C9IYK1 514 aa7.12□□□□□ -1.27
SMC4-227ENST00000497984 ARL4AP40617 200 aa7.12□□□□□ -1.27
SMC4-227ENST00000497984 NFIXQ14938 502 aa7.12□□□□□ -1.27
SMC4-227ENST00000497984 LDLRAD1Q5T700 205 aa7.12□□□□□ -1.27
SMC4-227ENST00000497984 TMC6Q7Z403 805 aa7.12□□□□□ -1.27
SMC4-227ENST00000497984 NUP43Q8NFH3 380 aa7.12□□□□□ -1.27
SMC4-227ENST00000497984 GIPC2Q8TF65 315 aa7.12□□□□□ -1.27
SMC4-227ENST00000497984 JMJD8Q96S16 334 aa7.12□□□□□ -1.27
SMC4-227ENST00000497984 BCL2L13Q9BXK5 485 aa7.12□□□□□ -1.27
SMC4-227ENST00000497984 GZF1Q9H116 711 aaPredicted RBP7.12□□□□□ -1.27
SMC4-227ENST00000497984 SUCOQ9UBS9 1254 aaKnown RBP7.12□□□□□ -1.27
SMC4-227ENST00000497984 OTOL1A6NHN0 477 aaPredicted RBP7.11□□□□□ -1.27
SMC4-227ENST00000497984 CYP4F8P98187 520 aa7.11□□□□□ -1.27
SMC4-227ENST00000497984 CBX2Q14781 532 aaPredicted RBP7.11□□□□□ -1.27
SMC4-227ENST00000497984 RAB3GAP1Q15042 981 aa7.11□□□□□ -1.27
SMC4-227ENST00000497984 VMACQ2NL98 169 aa7.11□□□□□ -1.27
SMC4-227ENST00000497984 INTS3Q68E01 1043 aaKnown RBP7.11□□□□□ -1.27
SMC4-227ENST00000497984 CNKSR3Q6P9H4 555 aa7.11□□□□□ -1.27
SMC4-227ENST00000497984 C7orf61Q8IZ16 206 aa7.11□□□□□ -1.27
SMC4-227ENST00000497984 IMPACTQ9P2X3 320 aa7.11□□□□□ -1.27
SMC4-227ENST00000497984 ZNRF3Q9ULT6 936 aa7.11□□□□□ -1.27
SMC4-227ENST00000497984 NUDT19A8MXV4 375 aa7.1□□□□□ -1.27
SMC4-227ENST00000497984 GSNP06396 782 aa7.1□□□□□ -1.27
SMC4-227ENST00000497984 RPTNQ6XPR3 784 aa7.1□□□□□ -1.27
SMC4-227ENST00000497984 KIAA0825Q8IV33 1275 aa7.1□□□□□ -1.27
SMC4-227ENST00000497984 SLC12A9Q9BXP2 914 aa7.1□□□□□ -1.27
SMC4-227ENST00000497984 IRS2Q9Y4H2 1338 aa7.09□□□□□ -1.27
SMC4-227ENST00000497984 FAM86C2PA6NEL3 165 aa7.09□□□□□ -1.27
SMC4-227ENST00000497984 SASH1O94885 1247 aa7.09□□□□□ -1.27
SMC4-227ENST00000497984 MVKQ03426 396 aa7.09□□□□□ -1.27
SMC4-227ENST00000497984 TMEM62Q0P6H9 643 aa7.09□□□□□ -1.27
SMC4-227ENST00000497984 ZNF326Q5BKZ1 582 aaKnown RBP7.09□□□□□ -1.27
SMC4-227ENST00000497984 PPFIBP1Q86W92 1011 aa7.09□□□□□ -1.27
SMC4-227ENST00000497984 CXorf38Q8TB03 319 aa7.09□□□□□ -1.27
SMC4-227ENST00000497984 FEZF2Q8TBJ5 459 aa7.09□□□□□ -1.27
SMC4-227ENST00000497984 DHRS1Q96LJ7 313 aa7.09□□□□□ -1.27
SMC4-227ENST00000497984 SPON2Q9BUD6 331 aa7.09□□□□□ -1.27
SMC4-227ENST00000497984 MSL3P1P0C860 447 aa7.08□□□□□ -1.28
SMC4-227ENST00000497984 SYN1P17600 705 aa7.08□□□□□ -1.28
SMC4-227ENST00000497984 PMS1P54277 932 aaKnown RBP7.08□□□□□ -1.28
SMC4-227ENST00000497984 NCKAP1LP55160 1127 aa7.08□□□□□ -1.28
SMC4-227ENST00000497984 PLEKHN1Q494U1 663 aaPredicted RBP7.08□□□□□ -1.28
SMC4-227ENST00000497984 TAB3Q8N5C8 712 aaPredicted RBP7.08□□□□□ -1.28
SMC4-227ENST00000497984 DSCC1Q9BVC3 393 aa7.08□□□□□ -1.28
SMC4-227ENST00000497984 SRRTQ9BXP5 876 aaKnown RBP7.08□□□□□ -1.28
SMC4-227ENST00000497984 H0Y8X5 98 aa7.07□□□□□ -1.28
SMC4-227ENST00000497984 BUB1BO60566 1050 aaPredicted RBP7.07□□□□□ -1.28
SMC4-227ENST00000497984 IGFBP6P24592 240 aaPredicted RBP7.07□□□□□ -1.28
SMC4-227ENST00000497984 ANKRD39Q53RE8 183 aa7.07□□□□□ -1.28
SMC4-227ENST00000497984 TDRD10Q5VZ19 366 aaKnown RBP7.07□□□□□ -1.28
SMC4-227ENST00000497984 CCDC144CPQ8IYA2 1237 aa7.07□□□□□ -1.28
SMC4-227ENST00000497984 LINC01356Q8N9X3 169 aa7.07□□□□□ -1.28
SMC4-227ENST00000497984 TP53I13Q8NBR0 393 aaPredicted RBP7.07□□□□□ -1.28
SMC4-227ENST00000497984 SYT8Q8NBV8 401 aa7.07□□□□□ -1.28
SMC4-227ENST00000497984 GSTM1P09488 218 aa7.06□□□□□ -1.28
SMC4-227ENST00000497984 MAPKAPK2P49137 400 aa7.06□□□□□ -1.28
SMC4-227ENST00000497984 KRTAP10-2P60368 255 aa7.06□□□□□ -1.28
SMC4-227ENST00000497984 SKOR2Q2VWA4 1001 aaPredicted RBP7.06□□□□□ -1.28
SMC4-227ENST00000497984 AXDND1Q5T1B0 1012 aaPredicted RBP7.06□□□□□ -1.28
SMC4-227ENST00000497984 DCAF15Q66K64 600 aa7.06□□□□□ -1.28
SMC4-227ENST00000497984 SP8Q8IXZ3 490 aa7.06□□□□□ -1.28
SMC4-227ENST00000497984 PWWP2AQ96N64 755 aa7.06□□□□□ -1.28
SMC4-227ENST00000497984 LUC7LQ9NQ29 371 aaKnown RBP7.06□□□□□ -1.28
SMC4-227ENST00000497984 JAG2Q9Y219 1238 aa7.06□□□□□ -1.28
SMC4-227ENST00000497984 FGF10O15520 208 aaPredicted RBP7.05□□□□□ -1.28
SMC4-227ENST00000497984 IMPDH2P12268 514 aa7.05□□□□□ -1.28
SMC4-227ENST00000497984 FBLN1P23142 703 aa7.05□□□□□ -1.28
SMC4-227ENST00000497984 ZNF445P59923 1031 aa7.05□□□□□ -1.28
SMC4-227ENST00000497984 NR1I3Q14994 352 aa7.05□□□□□ -1.28
SMC4-227ENST00000497984 HLA-DQA1Q5Y7H0 255 aa7.05□□□□□ -1.28
SMC4-227ENST00000497984 SMARCC1Q92922 1105 aaPredicted RBP7.05□□□□□ -1.28
SMC4-227ENST00000497984 GP6Q9HCN6 339 aa7.05□□□□□ -1.28
SMC4-227ENST00000497984 SRGAP3O43295 1099 aa7.04□□□□□ -1.28
SMC4-227ENST00000497984 DBHP09172 617 aa7.04□□□□□ -1.28
SMC4-227ENST00000497984 ZNF200P98182 395 aaPredicted RBP7.04□□□□□ -1.28
SMC4-227ENST00000497984 CAP1Q01518 475 aa7.04□□□□□ -1.28
SMC4-227ENST00000497984 ZYXQ15942 572 aaKnown RBP7.04□□□□□ -1.28
SMC4-227ENST00000497984 CWF19L1Q69YN2 538 aaKnown RBP7.04□□□□□ -1.28
SMC4-227ENST00000497984 ZC3H14Q6PJT7 736 aaKnown RBP7.04□□□□□ -1.28
SMC4-227ENST00000497984 ZDHHC14Q8IZN3 488 aa7.04□□□□□ -1.28
SMC4-227ENST00000497984 NAT16Q8N8M0 369 aa7.04□□□□□ -1.28
SMC4-227ENST00000497984 TMEM87AQ8NBN3 555 aa7.04□□□□□ -1.28
SMC4-227ENST00000497984 BRF1Q92994 677 aa7.04□□□□□ -1.28
SMC4-227ENST00000497984 FHOD1Q9Y613 1164 aa7.04□□□□□ -1.28
SMC4-227ENST00000497984 FFAR3O14843 346 aa7.03□□□□□ -1.28
SMC4-227ENST00000497984 LIMS1P48059 325 aa7.03□□□□□ -1.28
SMC4-227ENST00000497984 CYP2R1Q6VVX0 501 aa7.03□□□□□ -1.28
SMC4-227ENST00000497984 FCRL3Q96P31 734 aaPredicted RBP7.03□□□□□ -1.28
SMC4-227ENST00000497984 TM9SF2Q99805 663 aa7.03□□□□□ -1.28
SMC4-227ENST00000497984 PLA2G2DQ9UNK4 145 aa7.03□□□□□ -1.28
SMC4-227ENST00000497984 HCFC2Q9Y5Z7 792 aa7.03□□□□□ -1.28
SMC4-227ENST00000497984 CYBBP04839 570 aa7.02□□□□□ -1.29
SMC4-227ENST00000497984 CD247P20963 164 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms