RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 PRDM1O75626 825 aa14.53□□□□□ -0.08
GAPVD1-220ENST00000497580 AP1G2O75843 785 aa14.53□□□□□ -0.08
GAPVD1-220ENST00000497580 IRX1P78414 480 aaPredicted RBP14.53□□□□□ -0.08
GAPVD1-220ENST00000497580 CTDSPL2Q05D32 466 aa14.53□□□□□ -0.08
GAPVD1-220ENST00000497580 TUBB8Q3ZCM7 444 aa14.53□□□□□ -0.08
GAPVD1-220ENST00000497580 OSBPL9Q96SU4 736 aa14.53□□□□□ -0.08
GAPVD1-220ENST00000497580 OSBPL7Q9BZF2 842 aa14.53□□□□□ -0.08
GAPVD1-220ENST00000497580 CEP126Q9P2H0 1117 aa14.53□□□□□ -0.08
GAPVD1-220ENST00000497580 LIMA1Q9UHB6 759 aaKnown RBP14.53□□□□□ -0.08
GAPVD1-220ENST00000497580 L3MBTL1Q9Y468 752 aa14.53□□□□□ -0.08
GAPVD1-220ENST00000497580 SPATA31D1Q6ZQQ2 1576 aa14.52□□□□□ -0.08
GAPVD1-220ENST00000497580 KIF4AO95239 1232 aa14.52□□□□□ -0.08
GAPVD1-220ENST00000497580 GLI1P08151 1106 aa14.52□□□□□ -0.08
GAPVD1-220ENST00000497580 KLHL7Q8IXQ5 586 aa14.52□□□□□ -0.08
GAPVD1-220ENST00000497580 MB21D1Q8N884 522 aa14.52□□□□□ -0.08
GAPVD1-220ENST00000497580 PLCD4Q9BRC7 762 aa14.52□□□□□ -0.08
GAPVD1-220ENST00000497580 IFIH1Q9BYX4 1025 aaKnown RBP14.52□□□□□ -0.08
GAPVD1-220ENST00000497580 YIPF3Q9GZM5 350 aa14.52□□□□□ -0.08
GAPVD1-220ENST00000497580 PLAAQ9Y263 795 aa14.52□□□□□ -0.08
GAPVD1-220ENST00000497580 AKR1B10O60218 316 aa14.52□□□□□ -0.09
GAPVD1-220ENST00000497580 GCP02774 474 aa14.52□□□□□ -0.09
GAPVD1-220ENST00000497580 CACNA2D3Q8IZS8 1091 aa14.52□□□□□ -0.09
GAPVD1-220ENST00000497580 ARMC2Q8NEN0 867 aa14.52□□□□□ -0.09
GAPVD1-220ENST00000497580 GSDMAQ96QA5 445 aa14.52□□□□□ -0.09
GAPVD1-220ENST00000497580 PHF20L1A8MW92 1017 aa14.52□□□□□ -0.09
GAPVD1-220ENST00000497580 UPP2O95045 317 aa14.52□□□□□ -0.09
GAPVD1-220ENST00000497580 PDIA6Q15084 440 aa14.52□□□□□ -0.09
GAPVD1-220ENST00000497580 ENOX2Q16206 610 aaKnown RBP14.52□□□□□ -0.09
GAPVD1-220ENST00000497580 IFT20Q8IY31 132 aa14.52□□□□□ -0.09
GAPVD1-220ENST00000497580 PARD3BQ8TEW8 1205 aa14.52□□□□□ -0.09
GAPVD1-220ENST00000497580 ATP6V1G3Q96LB4 118 aa14.52□□□□□ -0.09
GAPVD1-220ENST00000497580 AXIN2Q9Y2T1 843 aa14.52□□□□□ -0.09
GAPVD1-220ENST00000497580 MON2Q7Z3U7 1717 aa14.51□□□□□ -0.09
GAPVD1-220ENST00000497580 TMCO5BA8MYB1 307 aa14.51□□□□□ -0.09
GAPVD1-220ENST00000497580 MRPL12P52815 198 aaKnown RBP14.51□□□□□ -0.09
GAPVD1-220ENST00000497580 RTN1Q16799 776 aa14.51□□□□□ -0.09
GAPVD1-220ENST00000497580 MMGT1Q8N4V1 131 aa14.51□□□□□ -0.09
GAPVD1-220ENST00000497580 APPBP2Q92624 585 aa14.51□□□□□ -0.09
GAPVD1-220ENST00000497580 KRT12Q99456 494 aa14.51□□□□□ -0.09
GAPVD1-220ENST00000497580 STRN4Q9NRL3 753 aa14.51□□□□□ -0.09
GAPVD1-220ENST00000497580 LAMA4Q16363 1823 aa14.51□□□□□ -0.09
GAPVD1-220ENST00000497580 SLC8A1P32418 973 aa14.51□□□□□ -0.09
GAPVD1-220ENST00000497580 SCTRP47872 440 aa14.51□□□□□ -0.09
GAPVD1-220ENST00000497580 ZKSCAN8Q15776 578 aaPredicted RBP14.51□□□□□ -0.09
GAPVD1-220ENST00000497580 NTRK3Q16288 839 aa14.51□□□□□ -0.09
GAPVD1-220ENST00000497580 ZNF790Q6PG37 636 aa14.51□□□□□ -0.09
GAPVD1-220ENST00000497580 WASF1Q92558 559 aa14.51□□□□□ -0.09
GAPVD1-220ENST00000497580 HVCN1Q96D96 273 aa14.51□□□□□ -0.09
GAPVD1-220ENST00000497580 ACTR5Q9H9F9 607 aaPredicted RBP14.51□□□□□ -0.09
GAPVD1-220ENST00000497580 IRF6O14896 467 aa14.51□□□□□ -0.09
GAPVD1-220ENST00000497580 PAK2Q13177 524 aa14.51□□□□□ -0.09
GAPVD1-220ENST00000497580 KCNB1Q14721 858 aa14.51□□□□□ -0.09
GAPVD1-220ENST00000497580 ANKRD20A8PQ5CZ79 823 aa14.51□□□□□ -0.09
GAPVD1-220ENST00000497580 CCDC50Q8IVM0 306 aa14.51□□□□□ -0.09
GAPVD1-220ENST00000497580 ALS2CR12Q96Q35 445 aa14.51□□□□□ -0.09
GAPVD1-220ENST00000497580 GMNCA6NCL1 334 aa14.5□□□□□ -0.09
GAPVD1-220ENST00000497580 SEMA3EO15041 775 aa14.5□□□□□ -0.09
GAPVD1-220ENST00000497580 EPB41P11171 864 aaKnown RBP14.5□□□□□ -0.09
GAPVD1-220ENST00000497580 FECHP22830 423 aa14.5□□□□□ -0.09
GAPVD1-220ENST00000497580 ATG9AQ7Z3C6 839 aa14.5□□□□□ -0.09
GAPVD1-220ENST00000497580 TMC4Q7Z404 712 aa14.5□□□□□ -0.09
GAPVD1-220ENST00000497580 TBC1D1Q86TI0 1168 aaPredicted RBP14.5□□□□□ -0.09
GAPVD1-220ENST00000497580 C2CD5Q86YS7 1000 aa14.5□□□□□ -0.09
GAPVD1-220ENST00000497580 FNBP4Q8N3X1 1017 aaPredicted RBP14.5□□□□□ -0.09
GAPVD1-220ENST00000497580 TRIM58Q8NG06 486 aa14.5□□□□□ -0.09
GAPVD1-220ENST00000497580 NOD2Q9HC29 1040 aa14.5□□□□□ -0.09
GAPVD1-220ENST00000497580 FAM217BQ9NTX9 383 aaPredicted RBP14.5□□□□□ -0.09
GAPVD1-220ENST00000497580 CPSF2Q9P2I0 782 aaKnown RBP14.5□□□□□ -0.09
GAPVD1-220ENST00000497580 HYOU1Q9Y4L1 999 aa14.5□□□□□ -0.09
GAPVD1-220ENST00000497580 CPDO75976 1380 aa14.5□□□□□ -0.09
GAPVD1-220ENST00000497580 RGPD1P0DJD0 1748 aa14.5□□□□□ -0.09
GAPVD1-220ENST00000497580 NUTM2BA6NNL0 878 aaPredicted RBP14.5□□□□□ -0.09
GAPVD1-220ENST00000497580 NUTM2EB1AL46 878 aaPredicted RBP14.5□□□□□ -0.09
GAPVD1-220ENST00000497580 PRCPP42785 496 aa14.5□□□□□ -0.09
GAPVD1-220ENST00000497580 MTIF2P46199 727 aaKnown RBP14.5□□□□□ -0.09
GAPVD1-220ENST00000497580 CEP120Q8N960 986 aa14.5□□□□□ -0.09
GAPVD1-220ENST00000497580 ANO9A1A5B4 782 aa14.5□□□□□ -0.09
GAPVD1-220ENST00000497580 HGSO14964 777 aaPredicted RBP14.5□□□□□ -0.09
GAPVD1-220ENST00000497580 YTHDF3Q7Z739 585 aaKnown RBP14.5□□□□□ -0.09
GAPVD1-220ENST00000497580 SEC16BQ96JE7 1060 aa14.5□□□□□ -0.09
GAPVD1-220ENST00000497580 FAM167BQ9BTA0 163 aa14.5□□□□□ -0.09
GAPVD1-220ENST00000497580 ANKARQ7Z5J8 1434 aa14.49□□□□□ -0.09
GAPVD1-220ENST00000497580 SPATA20Q8TB22 786 aa14.49□□□□□ -0.09
GAPVD1-220ENST00000497580 ATP6V0A4Q9HBG4 840 aa14.49□□□□□ -0.09
GAPVD1-220ENST00000497580 RBM28Q9NW13 759 aaKnown RBP14.49□□□□□ -0.09
GAPVD1-220ENST00000497580 GCOM1H8Y6P7 765 aaPredicted RBP14.49□□□□□ -0.09
GAPVD1-220ENST00000497580 WNT7AO00755 349 aa14.49□□□□□ -0.09
GAPVD1-220ENST00000497580 MYZAPP0CAP1 466 aa14.49□□□□□ -0.09
GAPVD1-220ENST00000497580 EARS2Q5JPH6 523 aaKnown RBP14.49□□□□□ -0.09
GAPVD1-220ENST00000497580 LMBR1Q8WVP7 490 aa14.49□□□□□ -0.09
GAPVD1-220ENST00000497580 UBLCP1Q8WVY7 318 aaPredicted RBP14.49□□□□□ -0.09
GAPVD1-220ENST00000497580 KAT6BQ8WYB5 2073 aa14.49□□□□□ -0.09
GAPVD1-220ENST00000497580 FAM207AQ9NSI2 230 aaPredicted RBP14.49□□□□□ -0.09
GAPVD1-220ENST00000497580 RWDD2AQ9UIY3 292 aa14.49□□□□□ -0.09
GAPVD1-220ENST00000497580 PACSIN2Q9UNF0 486 aaPredicted RBP14.49□□□□□ -0.09
GAPVD1-220ENST00000497580 LEMD3Q9Y2U8 911 aa14.49□□□□□ -0.09
GAPVD1-220ENST00000497580 XDHP47989 1333 aa14.49□□□□□ -0.09
GAPVD1-220ENST00000497580 FMNL1O95466 1100 aaPredicted RBP14.49□□□□□ -0.09
GAPVD1-220ENST00000497580 IL15P40933 162 aaPredicted RBP14.49□□□□□ -0.09
GAPVD1-220ENST00000497580 PMS1P54277 932 aaKnown RBP14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms