RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 PDZD8Q8NEN9 1154 aa6.02□□□□□ -1.45
SMC4-225ENST00000497203 SYTL4Q96C24 671 aaPredicted RBP6.02□□□□□ -1.45
SMC4-225ENST00000497203 C19orf44Q9H6X5 657 aa6.02□□□□□ -1.45
SMC4-225ENST00000497203 SUSD2Q9UGT4 822 aa6.02□□□□□ -1.45
SMC4-225ENST00000497203 TMA7Q9Y2S6 64 aaKnown RBP6.02□□□□□ -1.45
SMC4-225ENST00000497203 FHOD1Q9Y613 1164 aa6.02□□□□□ -1.45
SMC4-225ENST00000497203 ZNF503-AS2A6NEH8 195 aa6.01□□□□□ -1.45
SMC4-225ENST00000497203 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.01□□□□□ -1.45
SMC4-225ENST00000497203 ZNF205O95201 554 aa6.01□□□□□ -1.45
SMC4-225ENST00000497203 GSNP06396 782 aa6.01□□□□□ -1.45
SMC4-225ENST00000497203 ITGA4P13612 1032 aa6.01□□□□□ -1.45
SMC4-225ENST00000497203 RAC2P15153 192 aa6.01□□□□□ -1.45
SMC4-225ENST00000497203 VAV1P15498 845 aa6.01□□□□□ -1.45
SMC4-225ENST00000497203 TCEAL1Q15170 157 aa6.01□□□□□ -1.45
SMC4-225ENST00000497203 HEATR6Q6AI08 1181 aaKnown RBP6.01□□□□□ -1.45
SMC4-225ENST00000497203 ADCY4Q8NFM4 1077 aa6.01□□□□□ -1.45
SMC4-225ENST00000497203 ABHD4Q8TB40 342 aa6.01□□□□□ -1.45
SMC4-225ENST00000497203 MYLIPQ8WY64 445 aa6.01□□□□□ -1.45
SMC4-225ENST00000497203 FGD4Q96M96 766 aa6.01□□□□□ -1.45
SMC4-225ENST00000497203 NOL6Q9H6R4 1146 aaKnown RBP6.01□□□□□ -1.45
SMC4-225ENST00000497203 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.01□□□□□ -1.45
SMC4-225ENST00000497203 ZMYM5Q9UJ78 669 aa6.01□□□□□ -1.45
SMC4-225ENST00000497203 CDK11AQ9UQ88 783 aaPredicted RBP6.01□□□□□ -1.45
SMC4-225ENST00000497203 USP2O75604 605 aaPredicted RBP6□□□□□ -1.45
SMC4-225ENST00000497203 DUSP4Q13115 394 aa6□□□□□ -1.45
SMC4-225ENST00000497203 DDR2Q16832 855 aa6□□□□□ -1.45
SMC4-225ENST00000497203 TMEM67Q5HYA8 995 aa6□□□□□ -1.45
SMC4-225ENST00000497203 RTP2Q5QGT7 225 aa6□□□□□ -1.45
SMC4-225ENST00000497203 LARP1BQ659C4 914 aaKnown RBP6□□□□□ -1.45
SMC4-225ENST00000497203 LIN37Q96GY3 246 aaPredicted RBP6□□□□□ -1.45
SMC4-225ENST00000497203 MAP6Q96JE9 813 aa6□□□□□ -1.45
SMC4-225ENST00000497203 ZDHHC15Q96MV8 337 aa6□□□□□ -1.45
SMC4-225ENST00000497203 SRPK1Q96SB4 655 aaKnown RBP6□□□□□ -1.45
SMC4-225ENST00000497203 CCDC113Q9H0I3 377 aa6□□□□□ -1.45
SMC4-225ENST00000497203 AP5S1Q9NUS5 200 aa6□□□□□ -1.45
SMC4-225ENST00000497203 WHRNQ9P202 907 aa6□□□□□ -1.45
SMC4-225ENST00000497203 A0A087WZG4 1122 aa5.99□□□□□ -1.45
SMC4-225ENST00000497203 FITM1A5D6W6 292 aa5.99□□□□□ -1.45
SMC4-225ENST00000497203 DBX1A6NMT0 343 aa5.99□□□□□ -1.45
SMC4-225ENST00000497203 NOTOA8MTQ0 251 aa5.99□□□□□ -1.45
SMC4-225ENST00000497203 B2RBV5 119 aa5.99□□□□□ -1.45
SMC4-225ENST00000497203 SMARCA5O60264 1052 aaPredicted RBP5.99□□□□□ -1.45
SMC4-225ENST00000497203 EFEMP2O95967 443 aa5.99□□□□□ -1.45
SMC4-225ENST00000497203 GLI1P08151 1106 aa5.99□□□□□ -1.45
SMC4-225ENST00000497203 CEBPAP49715 358 aaPredicted RBP5.99□□□□□ -1.45
SMC4-225ENST00000497203 PPP2R5DQ14738 602 aa5.99□□□□□ -1.45
SMC4-225ENST00000497203 CWF19L1Q69YN2 538 aaKnown RBP5.99□□□□□ -1.45
SMC4-225ENST00000497203 GIMAP6Q6P9H5 292 aa5.99□□□□□ -1.45
SMC4-225ENST00000497203 C6orf15Q6UXA7 325 aaPredicted RBP5.99□□□□□ -1.45
SMC4-225ENST00000497203 ADAT2Q7Z6V5 191 aaKnown RBP5.99□□□□□ -1.45
SMC4-225ENST00000497203 OXR1Q8N573 874 aa5.99□□□□□ -1.45
SMC4-225ENST00000497203 ANKS4BQ8N8V4 417 aa5.99□□□□□ -1.45
SMC4-225ENST00000497203 MICAL1Q8TDZ2 1067 aa5.99□□□□□ -1.45
SMC4-225ENST00000497203 HHIPL1Q96JK4 782 aa5.99□□□□□ -1.45
SMC4-225ENST00000497203 DEPDC7Q96QD5 511 aa5.99□□□□□ -1.45
SMC4-225ENST00000497203 CDADC1Q9BWV3 514 aa5.99□□□□□ -1.45
SMC4-225ENST00000497203 SLC12A9Q9BXP2 914 aa5.99□□□□□ -1.45
SMC4-225ENST00000497203 RNF32Q9H0A6 362 aa5.99□□□□□ -1.45
SMC4-225ENST00000497203 PIF1Q9H611 641 aa5.99□□□□□ -1.45
SMC4-225ENST00000497203 ERVK13-1Q9NX77 482 aa5.99□□□□□ -1.45
SMC4-225ENST00000497203 APEX2Q9UBZ4 518 aa5.99□□□□□ -1.45
SMC4-225ENST00000497203 TLDC2A0PJX2 215 aa5.98□□□□□ -1.45
SMC4-225ENST00000497203 PSPNO60542 156 aa5.98□□□□□ -1.45
SMC4-225ENST00000497203 GSTM1P09488 218 aa5.98□□□□□ -1.45
SMC4-225ENST00000497203 GALK1P51570 392 aa5.98□□□□□ -1.45
SMC4-225ENST00000497203 CHRNEQ04844 493 aa5.98□□□□□ -1.45
SMC4-225ENST00000497203 RASA3Q14644 834 aa5.98□□□□□ -1.45
SMC4-225ENST00000497203 NCAPHQ15003 741 aa5.98□□□□□ -1.45
SMC4-225ENST00000497203 NR0B2Q15466 257 aa5.98□□□□□ -1.45
SMC4-225ENST00000497203 ZNF648Q5T619 568 aaPredicted RBP5.98□□□□□ -1.45
SMC4-225ENST00000497203 SPPL2CQ8IUH8 684 aa5.98□□□□□ -1.45
SMC4-225ENST00000497203 ZNF513Q8N8E2 541 aaPredicted RBP5.98□□□□□ -1.45
SMC4-225ENST00000497203 FCRL2Q96LA5 508 aaPredicted RBP5.98□□□□□ -1.45
SMC4-225ENST00000497203 GBP3Q9H0R5 595 aa5.98□□□□□ -1.45
SMC4-225ENST00000497203 SNTG2Q9NY99 539 aa5.98□□□□□ -1.45
SMC4-225ENST00000497203 DIS3Q9Y2L1 958 aaKnown RBP5.98□□□□□ -1.45
SMC4-225ENST00000497203 SF3B6Q9Y3B4 125 aaKnown RBP5.98□□□□□ -1.45
SMC4-225ENST00000497203 MSRB2Q9Y3D2 182 aa5.98□□□□□ -1.45
SMC4-225ENST00000497203 ANKRD34BA5PLL1 514 aa5.97□□□□□ -1.45
SMC4-225ENST00000497203 PPM1BO75688 479 aa5.97□□□□□ -1.45
SMC4-225ENST00000497203 DDAH1O94760 285 aa5.97□□□□□ -1.45
SMC4-225ENST00000497203 CD3EP07766 207 aa5.97□□□□□ -1.45
SMC4-225ENST00000497203 IFNGR1P15260 489 aa5.97□□□□□ -1.45
SMC4-225ENST00000497203 IFRD2Q12894 506 aaPredicted RBP5.97□□□□□ -1.45
SMC4-225ENST00000497203 RASGRF1Q13972 1273 aa5.97□□□□□ -1.45
SMC4-225ENST00000497203 CEP128Q6ZU80 1094 aa5.97□□□□□ -1.45
SMC4-225ENST00000497203 FAM178BQ8IXR5 827 aa5.97□□□□□ -1.45
SMC4-225ENST00000497203 FAM177A1Q8N128 213 aaPredicted RBP5.97□□□□□ -1.45
SMC4-225ENST00000497203 LILRA2Q8N149 483 aa5.97□□□□□ -1.45
SMC4-225ENST00000497203 CELF2-AS1Q8N7Q2 184 aa5.97□□□□□ -1.45
SMC4-225ENST00000497203 TMEM52Q8NDY8 209 aa5.97□□□□□ -1.45
SMC4-225ENST00000497203 SHISA4Q96DD7 197 aa5.97□□□□□ -1.45
SMC4-225ENST00000497203 MCMBPQ9BTE3 642 aa5.97□□□□□ -1.45
SMC4-225ENST00000497203 ST7Q9NRC1 585 aa5.97□□□□□ -1.45
SMC4-225ENST00000497203 CGGBP1Q9UFW8 167 aaPredicted RBP5.97□□□□□ -1.45
SMC4-225ENST00000497203 GPR55Q9Y2T6 319 aaPredicted RBP5.97□□□□□ -1.45
SMC4-225ENST00000497203 CADPSQ9ULU8 1353 aa5.96□□□□□ -1.45
SMC4-225ENST00000497203 FADS2P1A8MWK0 482 aa5.96□□□□□ -1.46
SMC4-225ENST00000497203 PDPK1O15530 556 aa5.96□□□□□ -1.46
SMC4-225ENST00000497203 VAMP4O75379 141 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms