RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 A0A0G2JMZ2 1700 aa25.18■■□□□ 1.62
C9orf3-222ENST00000496567 PNMA6FA0A0J9YX94 578 aa25.18■■□□□ 1.62
C9orf3-222ENST00000496567 ATP2A1O14983 1001 aa25.18■■□□□ 1.62
C9orf3-222ENST00000496567 PRPF3O43395 683 aaKnown RBP25.18■■□□□ 1.62
C9orf3-222ENST00000496567 SNAP25P60880 206 aa25.18■■□□□ 1.62
C9orf3-222ENST00000496567 QRICH1Q2TAL8 776 aa25.18■■□□□ 1.62
C9orf3-222ENST00000496567 NSUN7Q8NE18 718 aaKnown RBP25.18■■□□□ 1.62
C9orf3-222ENST00000496567 REPS2Q8NFH8 660 aa25.18■■□□□ 1.62
C9orf3-222ENST00000496567 BEGAINQ9BUH8 593 aa25.18■■□□□ 1.62
C9orf3-222ENST00000496567 RBPJLQ9UBG7 517 aa25.18■■□□□ 1.62
C9orf3-222ENST00000496567 ADGRA2Q96PE1 1338 aa25.18■■□□□ 1.62
C9orf3-222ENST00000496567 TRPA1O75762 1119 aa25.18■■□□□ 1.62
C9orf3-222ENST00000496567 FMNL1O95466 1100 aaPredicted RBP25.18■■□□□ 1.62
C9orf3-222ENST00000496567 CTDNEP1O95476 244 aa25.18■■□□□ 1.62
C9orf3-222ENST00000496567 ANP32AP39687 249 aaKnown RBP25.18■■□□□ 1.62
C9orf3-222ENST00000496567 TRAF1Q13077 416 aa25.18■■□□□ 1.62
C9orf3-222ENST00000496567 CUL4AQ13619 759 aa25.18■■□□□ 1.62
C9orf3-222ENST00000496567 TMEM132BQ14DG7 1078 aa25.18■■□□□ 1.62
C9orf3-222ENST00000496567 CCDC174Q6PII3 467 aa25.18■■□□□ 1.62
C9orf3-222ENST00000496567 PIBF1Q8WXW3 757 aa25.18■■□□□ 1.62
C9orf3-222ENST00000496567 SAGE1Q9NXZ1 904 aa25.18■■□□□ 1.62
C9orf3-222ENST00000496567 BTBD7Q9P203 1132 aa25.18■■□□□ 1.62
C9orf3-222ENST00000496567 ZSCAN21Q9Y5A6 473 aaPredicted RBP25.18■■□□□ 1.62
C9orf3-222ENST00000496567 BAZ2BQ9UIF8 2168 aaKnown RBP25.17■■□□□ 1.62
C9orf3-222ENST00000496567 ICAM1P05362 532 aa25.17■■□□□ 1.62
C9orf3-222ENST00000496567 POTEEQ6S8J3 1075 aa25.17■■□□□ 1.62
C9orf3-222ENST00000496567 CPXCR1Q8N123 301 aa25.17■■□□□ 1.62
C9orf3-222ENST00000496567 ANKRD13CQ8N6S4 541 aa25.17■■□□□ 1.62
C9orf3-222ENST00000496567 GPRC5AQ8NFJ5 357 aa25.17■■□□□ 1.62
C9orf3-222ENST00000496567 MORF4L1Q9UBU8 362 aa25.17■■□□□ 1.62
C9orf3-222ENST00000496567 ZNF214Q9UL59 606 aaPredicted RBP25.17■■□□□ 1.62
C9orf3-222ENST00000496567 COL11A1P12107 1806 aaPredicted RBP25.16■■□□□ 1.62
C9orf3-222ENST00000496567 STK36Q9NRP7 1315 aa25.16■■□□□ 1.62
C9orf3-222ENST00000496567 CNMDO75829 334 aa25.16■■□□□ 1.62
C9orf3-222ENST00000496567 PLS1Q14651 629 aa25.16■■□□□ 1.62
C9orf3-222ENST00000496567 FAM110CQ1W6H9 321 aa25.16■■□□□ 1.62
C9orf3-222ENST00000496567 FBXO11Q86XK2 927 aa25.16■■□□□ 1.62
C9orf3-222ENST00000496567 AMNQ9BXJ7 453 aa25.16■■□□□ 1.62
C9orf3-222ENST00000496567 TEX13BQ9BXU2 312 aa25.16■■□□□ 1.62
C9orf3-222ENST00000496567 RAVER2Q9HCJ3 691 aaKnown RBP25.16■■□□□ 1.62
C9orf3-222ENST00000496567 TXNRD2Q9NNW7 524 aa25.16■■□□□ 1.62
C9orf3-222ENST00000496567 ZNF536O15090 1300 aa25.15■■□□□ 1.62
C9orf3-222ENST00000496567 PTPDC1A2A3K4 754 aa25.15■■□□□ 1.62
C9orf3-222ENST00000496567 PPFIA3O75145 1194 aa25.15■■□□□ 1.62
C9orf3-222ENST00000496567 DEXIO95424 95 aa25.15■■□□□ 1.62
C9orf3-222ENST00000496567 STAT3P40763 770 aa25.15■■□□□ 1.62
C9orf3-222ENST00000496567 ERVK-9P63128 1117 aa25.15■■□□□ 1.62
C9orf3-222ENST00000496567 ERVK-24P63145 666 aa25.15■■□□□ 1.62
C9orf3-222ENST00000496567 HMGN5P82970 282 aaKnown RBP25.15■■□□□ 1.62
C9orf3-222ENST00000496567 C17orf99Q6UX52 265 aa25.15■■□□□ 1.62
C9orf3-222ENST00000496567 SPATC1LQ9H0A9 340 aa25.15■■□□□ 1.62
C9orf3-222ENST00000496567 CPA4Q9UI42 421 aa25.15■■□□□ 1.62
C9orf3-222ENST00000496567 hCG_1642624A0A1W2PR95 340 aa25.14■■□□□ 1.62
C9orf3-222ENST00000496567 BCRP11274 1271 aa25.14■■□□□ 1.62
C9orf3-222ENST00000496567 CCNA1P78396 465 aa25.14■■□□□ 1.62
C9orf3-222ENST00000496567 SNRNP48Q6IEG0 339 aaKnown RBP25.14■■□□□ 1.62
C9orf3-222ENST00000496567 SMARCC2Q8TAQ2 1214 aa25.14■■□□□ 1.62
C9orf3-222ENST00000496567 ORC3Q9UBD5 711 aaPredicted RBP25.14■■□□□ 1.62
C9orf3-222ENST00000496567 CCPG1Q9ULG6 757 aa25.14■■□□□ 1.62
C9orf3-222ENST00000496567 MYH6P13533 1939 aa25.14■■□□□ 1.61
C9orf3-222ENST00000496567 hCG_1984214I3L0E3 225 aa25.14■■□□□ 1.61
C9orf3-222ENST00000496567 TBC1D8O95759 1140 aa25.14■■□□□ 1.61
C9orf3-222ENST00000496567 COPB2P35606 906 aa25.14■■□□□ 1.61
C9orf3-222ENST00000496567 PFKFB3Q16875 520 aaPredicted RBP25.14■■□□□ 1.61
C9orf3-222ENST00000496567 ZNF713Q8N859 430 aaPredicted RBP25.14■■□□□ 1.61
C9orf3-222ENST00000496567 WASF1Q92558 559 aa25.14■■□□□ 1.61
C9orf3-222ENST00000496567 INTS4Q96HW7 963 aaKnown RBP25.14■■□□□ 1.61
C9orf3-222ENST00000496567 AGBL1Q96MI9 1066 aa25.14■■□□□ 1.61
C9orf3-222ENST00000496567 JAK2O60674 1132 aa25.13■■□□□ 1.61
C9orf3-222ENST00000496567 SLC25A27O95847 323 aa25.13■■□□□ 1.61
C9orf3-222ENST00000496567 SCG2P13521 617 aa25.13■■□□□ 1.61
C9orf3-222ENST00000496567 RIOX2Q8IUF8 465 aa25.13■■□□□ 1.61
C9orf3-222ENST00000496567 HSP90AA1P07900 732 aaKnown RBP25.12■■□□□ 1.61
C9orf3-222ENST00000496567 PKN1Q16512 942 aa25.12■■□□□ 1.61
C9orf3-222ENST00000496567 Q3C1V9 767 aa25.12■■□□□ 1.61
C9orf3-222ENST00000496567 TKFCQ3LXA3 575 aa25.12■■□□□ 1.61
C9orf3-222ENST00000496567 DDX11Q96FC9 970 aa25.12■■□□□ 1.61
C9orf3-222ENST00000496567 WBP1LQ9NX94 342 aa25.12■■□□□ 1.61
C9orf3-222ENST00000496567 SMC3Q9UQE7 1217 aa25.12■■□□□ 1.61
C9orf3-222ENST00000496567 PCDHA1Q9Y5I3 950 aa25.12■■□□□ 1.61
C9orf3-222ENST00000496567 ABCB11O95342 1321 aa25.11■■□□□ 1.61
C9orf3-222ENST00000496567 PEX10O60683 326 aa25.11■■□□□ 1.61
C9orf3-222ENST00000496567 PPP1R11O60927 126 aaPredicted RBP25.11■■□□□ 1.61
C9orf3-222ENST00000496567 SLC4A3P48751 1232 aa25.11■■□□□ 1.61
C9orf3-222ENST00000496567 USH1GQ495M9 461 aa25.11■■□□□ 1.61
C9orf3-222ENST00000496567 HEATR3Q7Z4Q2 680 aa25.11■■□□□ 1.61
C9orf3-222ENST00000496567 MOV10L1Q9BXT6 1211 aaKnown RBP25.11■■□□□ 1.61
C9orf3-222ENST00000496567 R3HDMLQ9H3Y0 253 aa25.11■■□□□ 1.61
C9orf3-222ENST00000496567 KIF3AQ9Y496 699 aa25.11■■□□□ 1.61
C9orf3-222ENST00000496567 ALAS1P13196 640 aa25.1■■□□□ 1.61
C9orf3-222ENST00000496567 FDPSP14324 419 aaKnown RBP25.1■■□□□ 1.61
C9orf3-222ENST00000496567 CCAR1Q8IX12 1150 aaKnown RBP25.1■■□□□ 1.61
C9orf3-222ENST00000496567 JMYQ8N9B5 988 aa25.1■■□□□ 1.61
C9orf3-222ENST00000496567 FAM184AQ8NB25 1140 aa25.1■■□□□ 1.61
C9orf3-222ENST00000496567 SHCBP1Q8NEM2 672 aa25.1■■□□□ 1.61
C9orf3-222ENST00000496567 MRPL11Q9Y3B7 192 aaKnown RBP25.1■■□□□ 1.61
C9orf3-222ENST00000496567 COA7Q96BR5 231 aa25.1■■□□□ 1.61
C9orf3-222ENST00000496567 BARHL2Q9NY43 387 aa25.1■■□□□ 1.61
C9orf3-222ENST00000496567 FBXO40Q9UH90 709 aa25.1■■□□□ 1.61
C9orf3-222ENST00000496567 DTNBO60941 627 aa25.09■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms