RNA–Protein interactions for RNA: ENST00000495619.1

NCKAP1-208, Transcript of NCK associated protein 1, humanhuman

TSL 3

Gene NCKAP1, Length 665 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-208ENST00000495619 POU5F2Q8N7G0 328 aa8.36□□□□□ -1.07
NCKAP1-208ENST00000495619 RCC1LQ96I51 464 aaKnown RBP8.36□□□□□ -1.07
NCKAP1-208ENST00000495619 FGD4Q96M96 766 aa8.36□□□□□ -1.07
NCKAP1-208ENST00000495619 G6PC3Q9BUM1 346 aa8.36□□□□□ -1.07
NCKAP1-208ENST00000495619 RNF32Q9H0A6 362 aa8.36□□□□□ -1.07
NCKAP1-208ENST00000495619 AP5S1Q9NUS5 200 aa8.36□□□□□ -1.07
NCKAP1-208ENST00000495619 TAF6LQ9Y6J9 622 aa8.36□□□□□ -1.07
NCKAP1-208ENST00000495619 NRDCO43847 1150 aa8.35□□□□□ -1.07
NCKAP1-208ENST00000495619 DDAH1O94760 285 aa8.35□□□□□ -1.07
NCKAP1-208ENST00000495619 TBC1D8O95759 1140 aa8.35□□□□□ -1.07
NCKAP1-208ENST00000495619 CD3EP07766 207 aa8.35□□□□□ -1.07
NCKAP1-208ENST00000495619 ETFBP38117 255 aa8.35□□□□□ -1.07
NCKAP1-208ENST00000495619 ARL4AP40617 200 aa8.35□□□□□ -1.07
NCKAP1-208ENST00000495619 NAALADL2Q58DX5 795 aa8.35□□□□□ -1.07
NCKAP1-208ENST00000495619 JAMLQ86YT9 394 aa8.35□□□□□ -1.07
NCKAP1-208ENST00000495619 FAM178BQ8IXR5 827 aa8.35□□□□□ -1.07
NCKAP1-208ENST00000495619 PPP1R14AQ96A00 147 aa8.35□□□□□ -1.07
NCKAP1-208ENST00000495619 HHIPL1Q96JK4 782 aa8.35□□□□□ -1.07
NCKAP1-208ENST00000495619 FAM84AQ96KN4 292 aa8.35□□□□□ -1.07
NCKAP1-208ENST00000495619 SLC12A9Q9BXP2 914 aa8.35□□□□□ -1.07
NCKAP1-208ENST00000495619 ZNF408Q9H9D4 720 aa8.35□□□□□ -1.07
NCKAP1-208ENST00000495619 PDE6BP35913 854 aa8.34□□□□□ -1.07
NCKAP1-208ENST00000495619 AMPD2Q01433 879 aa8.34□□□□□ -1.07
NCKAP1-208ENST00000495619 GRB10Q13322 594 aa8.34□□□□□ -1.07
NCKAP1-208ENST00000495619 ZPBP2Q6X784 338 aa8.34□□□□□ -1.07
NCKAP1-208ENST00000495619 IRF2BP1Q8IU81 584 aa8.34□□□□□ -1.07
NCKAP1-208ENST00000495619 ARHGEF39Q8N4T4 335 aa8.34□□□□□ -1.07
NCKAP1-208ENST00000495619 EPB41L4BQ9H329 900 aa8.34□□□□□ -1.07
NCKAP1-208ENST00000495619 NSUN3Q9H649 340 aaKnown RBP8.34□□□□□ -1.07
NCKAP1-208ENST00000495619 CRTAC1Q9NQ79 661 aa8.34□□□□□ -1.07
NCKAP1-208ENST00000495619 ERVK13-1Q9NX77 482 aa8.34□□□□□ -1.07
NCKAP1-208ENST00000495619 PPP1R1BQ9UD71 204 aaPredicted RBP8.34□□□□□ -1.07
NCKAP1-208ENST00000495619 EBF1Q9UH73 591 aa8.34□□□□□ -1.07
NCKAP1-208ENST00000495619 AKT3Q9Y243 479 aa8.34□□□□□ -1.07
NCKAP1-208ENST00000495619 YBX2Q9Y2T7 364 aaKnown RBP8.34□□□□□ -1.07
NCKAP1-208ENST00000495619 FADS2P1A8MWK0 482 aa8.33□□□□□ -1.08
NCKAP1-208ENST00000495619 PSPNO60542 156 aa8.33□□□□□ -1.08
NCKAP1-208ENST00000495619 EEF1DP3Q658K8 133 aa8.33□□□□□ -1.08
NCKAP1-208ENST00000495619 C6orf15Q6UXA7 325 aaPredicted RBP8.33□□□□□ -1.08
NCKAP1-208ENST00000495619 SP110Q9HB58 689 aa8.33□□□□□ -1.08
NCKAP1-208ENST00000495619 DCP1AQ9NPI6 582 aaPredicted RBP8.33□□□□□ -1.08
NCKAP1-208ENST00000495619 CGGBP1Q9UFW8 167 aaPredicted RBP8.33□□□□□ -1.08
NCKAP1-208ENST00000495619 GPR55Q9Y2T6 319 aaPredicted RBP8.33□□□□□ -1.08
NCKAP1-208ENST00000495619 STK10O94804 968 aaKnown RBP8.32□□□□□ -1.08
NCKAP1-208ENST00000495619 SEPHS1P49903 392 aa8.32□□□□□ -1.08
NCKAP1-208ENST00000495619 LAPTM5Q13571 262 aa8.32□□□□□ -1.08
NCKAP1-208ENST00000495619 RTP2Q5QGT7 225 aa8.32□□□□□ -1.08
NCKAP1-208ENST00000495619 FBXO15Q8NCQ5 510 aaPredicted RBP8.32□□□□□ -1.08
NCKAP1-208ENST00000495619 BVESQ8NE79 360 aa8.32□□□□□ -1.08
NCKAP1-208ENST00000495619 INTS4Q96HW7 963 aaKnown RBP8.32□□□□□ -1.08
NCKAP1-208ENST00000495619 C8orf37Q96NL8 207 aa8.32□□□□□ -1.08
NCKAP1-208ENST00000495619 FCRL3Q96P31 734 aaPredicted RBP8.32□□□□□ -1.08
NCKAP1-208ENST00000495619 DIRC2Q96SL1 478 aa8.32□□□□□ -1.08
NCKAP1-208ENST00000495619 PPP1R16BQ96T49 567 aa8.32□□□□□ -1.08
NCKAP1-208ENST00000495619 LRP2BPQ9P2M1 347 aa8.32□□□□□ -1.08
NCKAP1-208ENST00000495619 TRBV23OR9-2A0A075B6M9 112 aa8.31□□□□□ -1.08
NCKAP1-208ENST00000495619 A0A1W2PQJ5 194 aa8.31□□□□□ -1.08
NCKAP1-208ENST00000495619 AGRPO00253 132 aa8.31□□□□□ -1.08
NCKAP1-208ENST00000495619 PNLIPP16233 465 aa8.31□□□□□ -1.08
NCKAP1-208ENST00000495619 ATP2B1P20020 1258 aa8.31□□□□□ -1.08
NCKAP1-208ENST00000495619 TIGD5Q53EQ6 642 aa8.31□□□□□ -1.08
NCKAP1-208ENST00000495619 OLFML2BQ68BL8 750 aa8.31□□□□□ -1.08
NCKAP1-208ENST00000495619 RCSD1Q6JBY9 416 aa8.31□□□□□ -1.08
NCKAP1-208ENST00000495619 PRR23BQ6ZRT6 265 aa8.31□□□□□ -1.08
NCKAP1-208ENST00000495619 ANKS3Q6ZW76 656 aa8.31□□□□□ -1.08
NCKAP1-208ENST00000495619 NLRX1Q86UT6 975 aa8.31□□□□□ -1.08
NCKAP1-208ENST00000495619 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.31□□□□□ -1.08
NCKAP1-208ENST00000495619 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.3□□□□□ -1.08
NCKAP1-208ENST00000495619 FGF10O15520 208 aaPredicted RBP8.3□□□□□ -1.08
NCKAP1-208ENST00000495619 SV2CQ496J9 727 aa8.3□□□□□ -1.08
NCKAP1-208ENST00000495619 HSF5Q4G112 596 aaPredicted RBP8.3□□□□□ -1.08
NCKAP1-208ENST00000495619 EEPD1Q7L9B9 569 aa8.3□□□□□ -1.08
NCKAP1-208ENST00000495619 SIRT2Q8IXJ6 389 aa8.3□□□□□ -1.08
NCKAP1-208ENST00000495619 CKAP2LQ8IYA6 745 aa8.3□□□□□ -1.08
NCKAP1-208ENST00000495619 BHLHE22Q8NFJ8 381 aaPredicted RBP8.3□□□□□ -1.08
NCKAP1-208ENST00000495619 PTCHD1Q96NR3 888 aa8.3□□□□□ -1.08
NCKAP1-208ENST00000495619 SLC26A8Q96RN1 970 aa8.3□□□□□ -1.08
NCKAP1-208ENST00000495619 KRTAP4-8Q9BYQ9 185 aa8.3□□□□□ -1.08
NCKAP1-208ENST00000495619 TRIM55Q9BYV6 548 aa8.3□□□□□ -1.08
NCKAP1-208ENST00000495619 TANGO6Q9C0B7 1094 aa8.3□□□□□ -1.08
NCKAP1-208ENST00000495619 EPN3Q9H201 632 aa8.3□□□□□ -1.08
NCKAP1-208ENST00000495619 SUSD2Q9UGT4 822 aa8.3□□□□□ -1.08
NCKAP1-208ENST00000495619 BACE2Q9Y5Z0 518 aa8.3□□□□□ -1.08
NCKAP1-208ENST00000495619 OR14I1A6ND48 311 aa8.29□□□□□ -1.08
NCKAP1-208ENST00000495619 C2orf71A6NGG8 1288 aa8.29□□□□□ -1.08
NCKAP1-208ENST00000495619 AURKAO14965 403 aa8.29□□□□□ -1.08
NCKAP1-208ENST00000495619 U2SURPO15042 1029 aaKnown RBP8.29□□□□□ -1.08
NCKAP1-208ENST00000495619 VAMP4O75379 141 aa8.29□□□□□ -1.08
NCKAP1-208ENST00000495619 YBX3P16989 372 aaKnown RBP eCLIP8.29□□□□□ -1.084e-6■□□□□ 8.3
NCKAP1-208ENST00000495619 CYP4F8P98187 520 aa8.29□□□□□ -1.08
NCKAP1-208ENST00000495619 TMEM62Q0P6H9 643 aa8.29□□□□□ -1.08
NCKAP1-208ENST00000495619 DPY19L1Q2PZI1 675 aa8.29□□□□□ -1.08
NCKAP1-208ENST00000495619 SLCO6A1Q86UG4 719 aa8.29□□□□□ -1.08
NCKAP1-208ENST00000495619 EMC9Q9Y3B6 208 aa8.29□□□□□ -1.08
NCKAP1-208ENST00000495619 ABLIM1O14639 778 aa8.28□□□□□ -1.08
NCKAP1-208ENST00000495619 KCNH1O95259 989 aa8.28□□□□□ -1.08
NCKAP1-208ENST00000495619 MPOP05164 745 aa8.28□□□□□ -1.08
NCKAP1-208ENST00000495619 IFNGR1P15260 489 aa8.28□□□□□ -1.08
NCKAP1-208ENST00000495619 PRKCAP17252 672 aa8.28□□□□□ -1.08
NCKAP1-208ENST00000495619 ADGRF1Q5T601 910 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms