RNA–Protein interactions for RNA: ENST00000494620.1

SCRN1-209, Transcript of secernin 1, humanhuman

TSL 4

Gene SCRN1, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-209ENST00000494620 MPHOSPH6Q99547 160 aaKnown RBP12.91□□□□□ -0.34
SCRN1-209ENST00000494620 ZKSCAN3Q9BRR0 538 aa12.91□□□□□ -0.34
SCRN1-209ENST00000494620 SPC25Q9HBM1 224 aa12.91□□□□□ -0.34
SCRN1-209ENST00000494620 RNF146Q9NTX7 359 aa12.91□□□□□ -0.34
SCRN1-209ENST00000494620 ZSWIM5Q9P217 1185 aa12.91□□□□□ -0.34
SCRN1-209ENST00000494620 PRKAG2Q9UGJ0 569 aa12.91□□□□□ -0.34
SCRN1-209ENST00000494620 FAM184BQ9ULE4 1060 aa12.91□□□□□ -0.34
SCRN1-209ENST00000494620 TACC3Q9Y6A5 838 aa12.91□□□□□ -0.34
SCRN1-209ENST00000494620 PFASO15067 1338 aa12.9□□□□□ -0.34
SCRN1-209ENST00000494620 SYNGAP1Q96PV0 1343 aa12.9□□□□□ -0.34
SCRN1-209ENST00000494620 IGHA2P01877 340 aa12.9□□□□□ -0.34
SCRN1-209ENST00000494620 ICAM1P05362 532 aa12.9□□□□□ -0.34
SCRN1-209ENST00000494620 NEFLP07196 543 aa12.9□□□□□ -0.34
SCRN1-209ENST00000494620 PDHBP11177 359 aa12.9□□□□□ -0.34
SCRN1-209ENST00000494620 SLC16A2P36021 539 aa12.9□□□□□ -0.34
SCRN1-209ENST00000494620 SART3Q15020 963 aaKnown RBP12.9□□□□□ -0.34
SCRN1-209ENST00000494620 HABP4Q5JVS0 413 aaKnown RBP12.9□□□□□ -0.34
SCRN1-209ENST00000494620 CASC1Q6TDU7 716 aa12.9□□□□□ -0.34
SCRN1-209ENST00000494620 MAMDC4Q6UXC1 1216 aa12.9□□□□□ -0.34
SCRN1-209ENST00000494620 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.9□□□□□ -0.34
SCRN1-209ENST00000494620 RALYLQ86SE5 291 aaKnown RBP12.9□□□□□ -0.34
SCRN1-209ENST00000494620 TRPV1Q8NER1 839 aa12.9□□□□□ -0.34
SCRN1-209ENST00000494620 ABHD16BQ9H3Z7 469 aa12.9□□□□□ -0.34
SCRN1-209ENST00000494620 ZHX1Q9UKY1 873 aaPredicted RBP12.9□□□□□ -0.34
SCRN1-209ENST00000494620 FRMPD2Q68DX3 1309 aaPredicted RBP12.89□□□□□ -0.35
SCRN1-209ENST00000494620 DNAJC25-GNG10A0A024R161 153 aa12.89□□□□□ -0.35
SCRN1-209ENST00000494620 B4DLN1 442 aa12.89□□□□□ -0.35
SCRN1-209ENST00000494620 DHX16O60231 1041 aaKnown RBP12.89□□□□□ -0.35
SCRN1-209ENST00000494620 MRPL12P52815 198 aaKnown RBP12.89□□□□□ -0.35
SCRN1-209ENST00000494620 ZNF543Q08ER8 600 aa12.89□□□□□ -0.35
SCRN1-209ENST00000494620 GJC2Q5T442 439 aaPredicted RBP12.89□□□□□ -0.35
SCRN1-209ENST00000494620 IFIT1BQ5T764 474 aaKnown RBP12.89□□□□□ -0.35
SCRN1-209ENST00000494620 ANO1Q5XXA6 986 aa12.89□□□□□ -0.35
SCRN1-209ENST00000494620 TTBK2Q6IQ55 1244 aa12.89□□□□□ -0.35
SCRN1-209ENST00000494620 NSMFQ6X4W1 530 aa12.89□□□□□ -0.35
SCRN1-209ENST00000494620 C7orf61Q8IZ16 206 aa12.89□□□□□ -0.35
SCRN1-209ENST00000494620 PNMA1Q8ND90 353 aa12.89□□□□□ -0.35
SCRN1-209ENST00000494620 NCOA7Q8NI08 942 aa12.89□□□□□ -0.35
SCRN1-209ENST00000494620 ANKS1AQ92625 1134 aa12.89□□□□□ -0.35
SCRN1-209ENST00000494620 RANBP17Q9H2T7 1088 aaKnown RBP12.89□□□□□ -0.35
SCRN1-209ENST00000494620 XPNPEP3Q9NQH7 507 aa12.89□□□□□ -0.35
SCRN1-209ENST00000494620 ADD3Q9UEY8 706 aaKnown RBP12.89□□□□□ -0.35
SCRN1-209ENST00000494620 NEDD4P46934 1319 aa12.88□□□□□ -0.35
SCRN1-209ENST00000494620 SGSM2O43147 1006 aa12.88□□□□□ -0.35
SCRN1-209ENST00000494620 PARP1P09874 1014 aaKnown RBP12.88□□□□□ -0.35
SCRN1-209ENST00000494620 COL6A1P12109 1028 aa12.88□□□□□ -0.35
SCRN1-209ENST00000494620 MNX1P50219 401 aaPredicted RBP12.88□□□□□ -0.35
SCRN1-209ENST00000494620 SNAP25P60880 206 aa12.88□□□□□ -0.35
SCRN1-209ENST00000494620 ACVR2BQ13705 512 aa12.88□□□□□ -0.35
SCRN1-209ENST00000494620 ASPRV1Q53RT3 343 aa12.88□□□□□ -0.35
SCRN1-209ENST00000494620 CHRDL2Q6WN34 429 aa12.88□□□□□ -0.35
SCRN1-209ENST00000494620 NOL8Q76FK4 1167 aaKnown RBP12.88□□□□□ -0.35
SCRN1-209ENST00000494620 CCDC136Q96JN2 1154 aa12.88□□□□□ -0.35
SCRN1-209ENST00000494620 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.88□□□□□ -0.35
SCRN1-209ENST00000494620 COLQQ9Y215 455 aaPredicted RBP12.88□□□□□ -0.35
SCRN1-209ENST00000494620 ZNF536O15090 1300 aa12.88□□□□□ -0.35
SCRN1-209ENST00000494620 ZNF865P0CJ78 1059 aaPredicted RBP12.87□□□□□ -0.35
SCRN1-209ENST00000494620 SNHG28P0DPA3 235 aa12.87□□□□□ -0.35
SCRN1-209ENST00000494620 ATN1P54259 1190 aaPredicted RBP12.87□□□□□ -0.35
SCRN1-209ENST00000494620 TRAF1Q13077 416 aa12.87□□□□□ -0.35
SCRN1-209ENST00000494620 ARMCX2Q7L311 632 aa12.87□□□□□ -0.35
SCRN1-209ENST00000494620 A1CFQ9NQ94 594 aaKnown RBP12.87□□□□□ -0.35
SCRN1-209ENST00000494620 TNKSO95271 1327 aa12.87□□□□□ -0.35
SCRN1-209ENST00000494620 GREB1LQ9C091 1923 aaPredicted RBP12.86□□□□□ -0.35
SCRN1-209ENST00000494620 PTPDC1A2A3K4 754 aa12.86□□□□□ -0.35
SCRN1-209ENST00000494620 IFIT3O14879 490 aaKnown RBP12.86□□□□□ -0.35
SCRN1-209ENST00000494620 DUSP11O75319 330 aaKnown RBP12.86□□□□□ -0.35
SCRN1-209ENST00000494620 SNAI1O95863 264 aaPredicted RBP12.86□□□□□ -0.35
SCRN1-209ENST00000494620 GOLGA8HP0CJ92 632 aa12.86□□□□□ -0.35
SCRN1-209ENST00000494620 LRRC41Q15345 812 aa12.86□□□□□ -0.35
SCRN1-209ENST00000494620 RNF207Q6ZRF8 634 aa12.86□□□□□ -0.35
SCRN1-209ENST00000494620 CCDC144CPQ8IYA2 1237 aa12.86□□□□□ -0.35
SCRN1-209ENST00000494620 ENAHQ8N8S7 591 aaPredicted RBP12.86□□□□□ -0.35
SCRN1-209ENST00000494620 FAM133AQ8N9E0 248 aa12.86□□□□□ -0.35
SCRN1-209ENST00000494620 PCSK9Q8NBP7 692 aaKnown RBP12.86□□□□□ -0.35
SCRN1-209ENST00000494620 NUP133Q8WUM0 1156 aa12.86□□□□□ -0.35
SCRN1-209ENST00000494620 MAP4K1Q92918 833 aa12.86□□□□□ -0.35
SCRN1-209ENST00000494620 VTI1AQ96AJ9 217 aa12.86□□□□□ -0.35
SCRN1-209ENST00000494620 LBHD1Q9BQE6 289 aaPredicted RBP12.86□□□□□ -0.35
SCRN1-209ENST00000494620 TSEN34Q9BSV6 310 aaKnown RBP12.86□□□□□ -0.35
SCRN1-209ENST00000494620 UBA5Q9GZZ9 404 aa12.86□□□□□ -0.35
SCRN1-209ENST00000494620 MAF1Q9H063 256 aa12.86□□□□□ -0.35
SCRN1-209ENST00000494620 ZMYND8Q9ULU4 1186 aaPredicted RBP12.86□□□□□ -0.35
SCRN1-209ENST00000494620 WDR19Q8NEZ3 1342 aa12.86□□□□□ -0.35
SCRN1-209ENST00000494620 PLXNB2O15031 1838 aa12.85□□□□□ -0.35
SCRN1-209ENST00000494620 LOC102724159A0A0B4J2E5 919 aa12.85□□□□□ -0.35
SCRN1-209ENST00000494620 ZEB2O60315 1214 aa12.85□□□□□ -0.35
SCRN1-209ENST00000494620 CYP21A2P08686 494 aa12.85□□□□□ -0.35
SCRN1-209ENST00000494620 TAL1P17542 331 aaPredicted RBP12.85□□□□□ -0.35
SCRN1-209ENST00000494620 ADCYAP1R1P41586 468 aa12.85□□□□□ -0.35
SCRN1-209ENST00000494620 CNTN2Q02246 1040 aa12.85□□□□□ -0.35
SCRN1-209ENST00000494620 PTH1RQ03431 593 aa12.85□□□□□ -0.35
SCRN1-209ENST00000494620 WTAPQ15007 396 aa12.85□□□□□ -0.35
SCRN1-209ENST00000494620 PWP2Q15269 919 aaKnown RBP12.85□□□□□ -0.35
SCRN1-209ENST00000494620 RNF20Q5VTR2 975 aa12.85□□□□□ -0.35
SCRN1-209ENST00000494620 SLC39A5Q6ZMH5 540 aa12.85□□□□□ -0.35
SCRN1-209ENST00000494620 MCF2L2Q86YR7 1114 aa12.85□□□□□ -0.35
SCRN1-209ENST00000494620 TMTC2Q8N394 836 aa12.85□□□□□ -0.35
SCRN1-209ENST00000494620 AP5M1Q9H0R1 490 aa12.85□□□□□ -0.35
SCRN1-209ENST00000494620 VAT1LQ9HCJ6 419 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms