RNA–Protein interactions for RNA: ENST00000494422.1

BRD9-211, Transcript of bromodomain containing 9, humanhuman

TSL 3

Gene BRD9, Length 449 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-211ENST00000494422 SMCR8Q8TEV9 937 aaPredicted RBP7.44□□□□□ -1.22
BRD9-211ENST00000494422 ZSCAN31Q96LW9 406 aaPredicted RBP7.44□□□□□ -1.22
BRD9-211ENST00000494422 PTPN18Q99952 460 aa7.44□□□□□ -1.22
BRD9-211ENST00000494422 SLF1Q9BQI6 1058 aa7.44□□□□□ -1.22
BRD9-211ENST00000494422 ASCC2Q9H1I8 757 aaPredicted RBP7.44□□□□□ -1.22
BRD9-211ENST00000494422 WBP1LQ9NX94 342 aa7.44□□□□□ -1.22
BRD9-211ENST00000494422 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.44□□□□□ -1.22
BRD9-211ENST00000494422 MORF4L1Q9UBU8 362 aa7.44□□□□□ -1.22
BRD9-211ENST00000494422 PPP1R9AQ9ULJ8 1098 aa7.44□□□□□ -1.22
BRD9-211ENST00000494422 ADAMTS5Q9UNA0 930 aa7.44□□□□□ -1.22
BRD9-211ENST00000494422 CTDP1Q9Y5B0 961 aaPredicted RBP7.44□□□□□ -1.22
BRD9-211ENST00000494422 TAF6LQ9Y6J9 622 aa7.44□□□□□ -1.22
BRD9-211ENST00000494422 PALM3A6NDB9 673 aaPredicted RBP7.43□□□□□ -1.22
BRD9-211ENST00000494422 TMEM232C9JQI7 657 aa7.43□□□□□ -1.22
BRD9-211ENST00000494422 hCG_1984214I3L0E3 225 aa7.43□□□□□ -1.22
BRD9-211ENST00000494422 ZBED4O75132 1171 aa7.43□□□□□ -1.22
BRD9-211ENST00000494422 SLC25A27O95847 323 aa7.43□□□□□ -1.22
BRD9-211ENST00000494422 CDK11BP21127 795 aaKnown RBP7.43□□□□□ -1.22
BRD9-211ENST00000494422 METAP2P50579 478 aaKnown RBP eCLIP7.43□□□□□ -1.22
BRD9-211ENST00000494422 NEK4P51957 841 aa7.43□□□□□ -1.22
BRD9-211ENST00000494422 HERVK_113P62684 666 aa7.43□□□□□ -1.22
BRD9-211ENST00000494422 HTRA3P83110 453 aa7.43□□□□□ -1.22
BRD9-211ENST00000494422 IKQ13123 557 aaPredicted RBP7.43□□□□□ -1.22
BRD9-211ENST00000494422 KIF22Q14807 665 aa7.43□□□□□ -1.22
BRD9-211ENST00000494422 CCDC96Q2M329 555 aa7.43□□□□□ -1.22
BRD9-211ENST00000494422 SHROOM1Q2M3G4 852 aaPredicted RBP7.43□□□□□ -1.22
BRD9-211ENST00000494422 TKFCQ3LXA3 575 aa7.43□□□□□ -1.22
BRD9-211ENST00000494422 FAM83BQ5T0W9 1011 aa7.43□□□□□ -1.22
BRD9-211ENST00000494422 TREML2Q5T2D2 321 aa7.43□□□□□ -1.22
BRD9-211ENST00000494422 FAM177A1Q8N128 213 aaPredicted RBP7.43□□□□□ -1.22
BRD9-211ENST00000494422 ZNF687Q8N1G0 1237 aa7.43□□□□□ -1.22
BRD9-211ENST00000494422 CCDC82Q8N4S0 544 aa7.43□□□□□ -1.22
BRD9-211ENST00000494422 SAMD3Q8N6K7 520 aa7.43□□□□□ -1.22
BRD9-211ENST00000494422 ZNF713Q8N859 430 aaPredicted RBP7.43□□□□□ -1.22
BRD9-211ENST00000494422 FANCBQ8NB91 859 aa7.43□□□□□ -1.22
BRD9-211ENST00000494422 SHCBP1Q8NEM2 672 aa7.43□□□□□ -1.22
BRD9-211ENST00000494422 BRF1Q92994 677 aa7.43□□□□□ -1.22
BRD9-211ENST00000494422 SPZ1Q9BXG8 430 aa7.43□□□□□ -1.22
BRD9-211ENST00000494422 SH2B1Q9NRF2 756 aaPredicted RBP7.43□□□□□ -1.22
BRD9-211ENST00000494422 RNF186Q9NXI6 227 aa7.43□□□□□ -1.22
BRD9-211ENST00000494422 FBXO40Q9UH90 709 aa7.43□□□□□ -1.22
BRD9-211ENST00000494422 KLF18A0A0U1RQI7 1052 aa7.42□□□□□ -1.22
BRD9-211ENST00000494422 SPDYE16A6NNV3 312 aaPredicted RBP7.42□□□□□ -1.22
BRD9-211ENST00000494422 KLRF2D3W0D1 207 aa7.42□□□□□ -1.22
BRD9-211ENST00000494422 VWA5AO00534 786 aa7.42□□□□□ -1.22
BRD9-211ENST00000494422 CDKL5O76039 1030 aa7.42□□□□□ -1.22
BRD9-211ENST00000494422 BCRP11274 1271 aa7.42□□□□□ -1.22
BRD9-211ENST00000494422 HOXD10P28358 340 aa7.42□□□□□ -1.22
BRD9-211ENST00000494422 PRMT2P55345 433 aa7.42□□□□□ -1.22
BRD9-211ENST00000494422 SYDE2Q5VT97 1194 aa7.42□□□□□ -1.22
BRD9-211ENST00000494422 C17orf99Q6UX52 265 aa7.42□□□□□ -1.22
BRD9-211ENST00000494422 CHST3Q7LGC8 479 aa7.42□□□□□ -1.22
BRD9-211ENST00000494422 CLEC10AQ8IUN9 316 aa7.42□□□□□ -1.22
BRD9-211ENST00000494422 SPICE1Q8N0Z3 855 aa7.42□□□□□ -1.22
BRD9-211ENST00000494422 GPRC5AQ8NFJ5 357 aa7.42□□□□□ -1.22
BRD9-211ENST00000494422 NUP133Q8WUM0 1156 aa7.42□□□□□ -1.22
BRD9-211ENST00000494422 ERO1AQ96HE7 468 aa7.42□□□□□ -1.22
BRD9-211ENST00000494422 P2RX7Q99572 595 aaKnown RBP7.42□□□□□ -1.22
BRD9-211ENST00000494422 UPF3BQ9BZI7 483 aaKnown RBP7.42□□□□□ -1.22
BRD9-211ENST00000494422 RANBP17Q9H2T7 1088 aaKnown RBP7.42□□□□□ -1.22
BRD9-211ENST00000494422 KDM4CQ9H3R0 1056 aa7.42□□□□□ -1.22
BRD9-211ENST00000494422 RIOX1Q9H6W3 641 aa7.42□□□□□ -1.22
BRD9-211ENST00000494422 SLC38A10Q9HBR0 1119 aa7.42□□□□□ -1.22
BRD9-211ENST00000494422 MAP3K20Q9NYL2 800 aaKnown RBP7.42□□□□□ -1.22
BRD9-211ENST00000494422 MAD2L2Q9UI95 211 aa7.42□□□□□ -1.22
BRD9-211ENST00000494422 LIMCH1Q9UPQ0 1083 aa7.42□□□□□ -1.22
BRD9-211ENST00000494422 ADGRA2Q96PE1 1338 aa7.42□□□□□ -1.22
BRD9-211ENST00000494422 GOLGA8AA7E2F4 631 aa7.41□□□□□ -1.22
BRD9-211ENST00000494422 GOLGA8BA8MQT2 603 aa7.41□□□□□ -1.22
BRD9-211ENST00000494422 STRNO43815 780 aa7.41□□□□□ -1.22
BRD9-211ENST00000494422 FKTNO75072 461 aa7.41□□□□□ -1.22
BRD9-211ENST00000494422 TRPA1O75762 1119 aa7.41□□□□□ -1.22
BRD9-211ENST00000494422 PDIA3P30101 505 aaKnown RBP7.41□□□□□ -1.22
BRD9-211ENST00000494422 MAPK4P31152 587 aa7.41□□□□□ -1.22
BRD9-211ENST00000494422 CTCFP49711 727 aaPredicted RBP7.41□□□□□ -1.22
BRD9-211ENST00000494422 ERVK-9P63128 1117 aa7.41□□□□□ -1.22
BRD9-211ENST00000494422 ERVK-24P63145 666 aa7.41□□□□□ -1.22
BRD9-211ENST00000494422 SP3Q02447 781 aa7.41□□□□□ -1.22
BRD9-211ENST00000494422 CRHR2Q13324 411 aa7.41□□□□□ -1.22
BRD9-211ENST00000494422 TOB2Q14106 344 aaPredicted RBP7.41□□□□□ -1.22
BRD9-211ENST00000494422 RTN1Q16799 776 aa7.41□□□□□ -1.22
BRD9-211ENST00000494422 KIAA1755Q5JYT7 1200 aa7.41□□□□□ -1.22
BRD9-211ENST00000494422 KCTD1Q719H9 257 aa7.41□□□□□ -1.22
BRD9-211ENST00000494422 MICU3Q86XE3 530 aa7.41□□□□□ -1.22
BRD9-211ENST00000494422 CCAR1Q8IX12 1150 aaKnown RBP7.41□□□□□ -1.22
BRD9-211ENST00000494422 ABRAQ8N0Z2 381 aa7.41□□□□□ -1.22
BRD9-211ENST00000494422 CHST13Q8NET6 341 aa7.41□□□□□ -1.22
BRD9-211ENST00000494422 MTMR8Q96EF0 704 aa7.41□□□□□ -1.22
BRD9-211ENST00000494422 RRP36Q96EU6 259 aaKnown RBP7.41□□□□□ -1.22
BRD9-211ENST00000494422 ZIC5Q96T25 663 aa7.41□□□□□ -1.22
BRD9-211ENST00000494422 KIF2CQ99661 725 aa7.41□□□□□ -1.22
BRD9-211ENST00000494422 TEX13BQ9BXU2 312 aa7.41□□□□□ -1.22
BRD9-211ENST00000494422 LRRC2Q9BYS8 371 aa7.41□□□□□ -1.22
BRD9-211ENST00000494422 GLT8D2Q9H1C3 349 aa7.41□□□□□ -1.22
BRD9-211ENST00000494422 SLKQ9H2G2 1235 aaPredicted RBP7.41□□□□□ -1.22
BRD9-211ENST00000494422 MROH8Q9H579 483 aa7.41□□□□□ -1.22
BRD9-211ENST00000494422 SEC63Q9UGP8 760 aaKnown RBP7.41□□□□□ -1.22
BRD9-211ENST00000494422 PRR12Q9ULL5 1215 aa7.41□□□□□ -1.22
BRD9-211ENST00000494422 ISY1Q9ULR0 285 aaKnown RBP7.41□□□□□ -1.22
BRD9-211ENST00000494422 MTMR7Q9Y216 660 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms