RNA–Protein interactions for RNA: ENST00000494333.1

RIF1-211, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 743 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-211ENST00000494333 RARAP10276 462 aa10.06□□□□□ -0.8
RIF1-211ENST00000494333 RFX5P48382 616 aaPredicted RBP10.06□□□□□ -0.8
RIF1-211ENST00000494333 ZNF157P51786 506 aaPredicted RBP10.06□□□□□ -0.8
RIF1-211ENST00000494333 RBM5P52756 815 aaKnown RBP eCLIP10.06□□□□□ -0.82e-8■■■□□ 16.5
RIF1-211ENST00000494333 FKBP1AP62942 108 aaKnown RBP10.06□□□□□ -0.8
RIF1-211ENST00000494333 PTPN12Q05209 780 aaKnown RBP10.06□□□□□ -0.8
RIF1-211ENST00000494333 NOGQ13253 232 aa10.06□□□□□ -0.8
RIF1-211ENST00000494333 CAVIN4Q5BKX8 364 aa10.06□□□□□ -0.8
RIF1-211ENST00000494333 MFSD14BQ5SR56 506 aa10.06□□□□□ -0.8
RIF1-211ENST00000494333 C1orf229Q6ZS94 237 aaPredicted RBP10.06□□□□□ -0.8
RIF1-211ENST00000494333 FBXO33Q7Z6M2 555 aa10.06□□□□□ -0.8
RIF1-211ENST00000494333 FCHSD1Q86WN1 690 aa10.06□□□□□ -0.8
RIF1-211ENST00000494333 FRAT1Q92837 279 aaPredicted RBP10.06□□□□□ -0.8
RIF1-211ENST00000494333 ZBED3Q96IU2 234 aaPredicted RBP10.06□□□□□ -0.8
RIF1-211ENST00000494333 PRDM10Q9NQV6 1147 aa10.06□□□□□ -0.8
RIF1-211ENST00000494333 BRPF3Q9ULD4 1205 aa10.06□□□□□ -0.8
RIF1-211ENST00000494333 HDAC5Q9UQL6 1122 aa10.06□□□□□ -0.8
RIF1-211ENST00000494333 PCDHAC2Q9Y5I4 1007 aa10.06□□□□□ -0.8
RIF1-211ENST00000494333 FAM205AQ6ZU69 1335 aa10.06□□□□□ -0.8
RIF1-211ENST00000494333 KIF16BQ96L93 1317 aa10.06□□□□□ -0.8
RIF1-211ENST00000494333 PCNTO95613 3336 aa10.05□□□□□ -0.8
RIF1-211ENST00000494333 A6NHS1 94 aa10.05□□□□□ -0.8
RIF1-211ENST00000494333 FAM155AB1AL88 458 aaPredicted RBP10.05□□□□□ -0.8
RIF1-211ENST00000494333 SIN3BO75182 1162 aa10.05□□□□□ -0.8
RIF1-211ENST00000494333 CELA2BP08218 269 aaPredicted RBP10.05□□□□□ -0.8
RIF1-211ENST00000494333 HSPA8P11142 646 aaKnown RBP10.05□□□□□ -0.8
RIF1-211ENST00000494333 BCRP11274 1271 aa10.05□□□□□ -0.8
RIF1-211ENST00000494333 FKBP1BP68106 108 aa10.05□□□□□ -0.8
RIF1-211ENST00000494333 CFAP100Q494V2 611 aa10.05□□□□□ -0.8
RIF1-211ENST00000494333 C8orf34Q49A92 452 aa10.05□□□□□ -0.8
RIF1-211ENST00000494333 ZNF385CQ66K41 422 aaPredicted RBP10.05□□□□□ -0.8
RIF1-211ENST00000494333 INTS3Q68E01 1043 aaKnown RBP10.05□□□□□ -0.8
RIF1-211ENST00000494333 SLCO4C1Q6ZQN7 724 aa10.05□□□□□ -0.8
RIF1-211ENST00000494333 MOB2Q70IA6 237 aa10.05□□□□□ -0.8
RIF1-211ENST00000494333 VGLL2Q8N8G2 317 aa10.05□□□□□ -0.8
RIF1-211ENST00000494333 PRMT6Q96LA8 375 aaPredicted RBP10.05□□□□□ -0.8
RIF1-211ENST00000494333 MEIS3Q99687 375 aa10.05□□□□□ -0.8
RIF1-211ENST00000494333 SIL1Q9H173 461 aa10.05□□□□□ -0.8
RIF1-211ENST00000494333 LRRFIP2Q9Y608 721 aaKnown RBP10.05□□□□□ -0.8
RIF1-211ENST00000494333 UBE2Q2LH0YL09 131 aa10.04□□□□□ -0.8
RIF1-211ENST00000494333 MYO1BO43795 1136 aa10.04□□□□□ -0.8
RIF1-211ENST00000494333 MAP3K6O95382 1288 aa10.04□□□□□ -0.8
RIF1-211ENST00000494333 IFIT1P09914 478 aaKnown RBP10.04□□□□□ -0.8
RIF1-211ENST00000494333 NF2P35240 595 aa10.04□□□□□ -0.8
RIF1-211ENST00000494333 USP5P45974 858 aa10.04□□□□□ -0.8
RIF1-211ENST00000494333 KIF23Q02241 960 aaPredicted RBP10.04□□□□□ -0.8
RIF1-211ENST00000494333 CHAF1AQ13111 956 aaPredicted RBP10.04□□□□□ -0.8
RIF1-211ENST00000494333 PRKG1Q13976 671 aa10.04□□□□□ -0.8
RIF1-211ENST00000494333 PUM3Q15397 648 aaKnown RBP10.04□□□□□ -0.8
RIF1-211ENST00000494333 ATG9AQ7Z3C6 839 aa10.04□□□□□ -0.8
RIF1-211ENST00000494333 APOBEC3FQ8IUX4 373 aaKnown RBP10.04□□□□□ -0.8
RIF1-211ENST00000494333 GJD3Q8N144 294 aa10.04□□□□□ -0.8
RIF1-211ENST00000494333 ZSCAN1Q8NBB4 408 aa10.04□□□□□ -0.8
RIF1-211ENST00000494333 TTC16Q8NEE8 873 aa10.04□□□□□ -0.8
RIF1-211ENST00000494333 GZF1Q9H116 711 aaPredicted RBP10.04□□□□□ -0.8
RIF1-211ENST00000494333 IGFLR1Q9H665 355 aa10.04□□□□□ -0.8
RIF1-211ENST00000494333 TTF2Q9UNY4 1162 aaKnown RBP10.04□□□□□ -0.8
RIF1-211ENST00000494333 CLRN2A0PK11 232 aa10.03□□□□□ -0.8
RIF1-211ENST00000494333 OIP5O43482 229 aa10.03□□□□□ -0.8
RIF1-211ENST00000494333 NDUFB5O43674 189 aa10.03□□□□□ -0.8
RIF1-211ENST00000494333 MMP20O60882 483 aa10.03□□□□□ -0.8
RIF1-211ENST00000494333 GNAI3P08754 354 aa10.03□□□□□ -0.8
RIF1-211ENST00000494333 TRIM27P14373 513 aa10.03□□□□□ -0.8
RIF1-211ENST00000494333 FGFR2P21802 821 aa10.03□□□□□ -0.8
RIF1-211ENST00000494333 PDE12Q6L8Q7 609 aaKnown RBP10.03□□□□□ -0.8
RIF1-211ENST00000494333 ATF7IPQ6VMQ6 1270 aa10.03□□□□□ -0.8
RIF1-211ENST00000494333 GALNT6Q8NCL4 622 aa10.03□□□□□ -0.8
RIF1-211ENST00000494333 EDARADDQ8WWZ3 215 aa10.03□□□□□ -0.8
RIF1-211ENST00000494333 LPIN2Q92539 896 aa10.03□□□□□ -0.8
RIF1-211ENST00000494333 TNFRSF25Q93038 417 aa10.03□□□□□ -0.8
RIF1-211ENST00000494333 TRPM7Q96QT4 1865 aa10.03□□□□□ -0.8
RIF1-211ENST00000494333 DEFB129Q9H1M3 183 aa10.03□□□□□ -0.8
RIF1-211ENST00000494333 ELP3Q9H9T3 547 aa10.03□□□□□ -0.8
RIF1-211ENST00000494333 VEZTQ9HBM0 779 aa10.03□□□□□ -0.8
RIF1-211ENST00000494333 TNNQ9UQP3 1299 aa10.03□□□□□ -0.8
RIF1-211ENST00000494333 CA12O43570 354 aa10.02□□□□□ -0.81
RIF1-211ENST00000494333 EPXP11678 715 aa10.02□□□□□ -0.81
RIF1-211ENST00000494333 SLC5A1P13866 664 aa10.02□□□□□ -0.81
RIF1-211ENST00000494333 INSM1Q01101 510 aaPredicted RBP10.02□□□□□ -0.81
RIF1-211ENST00000494333 XKR5Q6UX68 686 aa10.02□□□□□ -0.81
RIF1-211ENST00000494333 SND1Q7KZF4 910 aaKnown RBP eCLIP10.02□□□□□ -0.81
RIF1-211ENST00000494333 ZNF438Q7Z4V0 828 aa10.02□□□□□ -0.81
RIF1-211ENST00000494333 SVOPQ8N4V2 548 aa10.02□□□□□ -0.81
RIF1-211ENST00000494333 TBC1D22AQ8WUA7 517 aa10.02□□□□□ -0.81
RIF1-211ENST00000494333 MDFIQ99750 246 aa10.02□□□□□ -0.81
RIF1-211ENST00000494333 TMEM63CQ9P1W3 806 aa10.02□□□□□ -0.81
RIF1-211ENST00000494333 PA2G4Q9UQ80 394 aaKnown RBP10.02□□□□□ -0.81
RIF1-211ENST00000494333 POLR2AP24928 1970 aaKnown RBP10.02□□□□□ -0.81
RIF1-211ENST00000494333 PSME4Q14997 1843 aa10.01□□□□□ -0.81
RIF1-211ENST00000494333 ADARB2-AS1A8MUL3 147 aa10.01□□□□□ -0.81
RIF1-211ENST00000494333 SRGAP3O43295 1099 aa10.01□□□□□ -0.81
RIF1-211ENST00000494333 CIAO1O76071 339 aa10.01□□□□□ -0.81
RIF1-211ENST00000494333 IL15P40933 162 aaPredicted RBP10.01□□□□□ -0.81
RIF1-211ENST00000494333 CRKP46108 304 aa10.01□□□□□ -0.81
RIF1-211ENST00000494333 TBC1D8BQ0IIM8 1120 aa10.01□□□□□ -0.81
RIF1-211ENST00000494333 GRIK5Q16478 980 aa10.01□□□□□ -0.81
RIF1-211ENST00000494333 ZKSCAN2Q63HK3 967 aa10.01□□□□□ -0.81
RIF1-211ENST00000494333 DHX32Q7L7V1 743 aaKnown RBP10.01□□□□□ -0.81
RIF1-211ENST00000494333 ARMC9Q7Z3E5 817 aa10.01□□□□□ -0.81
RIF1-211ENST00000494333 RASAL3Q86YV0 1011 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms