RNA–Protein interactions for RNA: ENST00000492840.1

SND1-216, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 5

Gene SND1, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-216ENST00000492840 SAFB2Q14151 953 aaKnown RBP eCLIP6.72□□□□□ -1.332e-7■■□□□ 12.7
SND1-216ENST00000492840 CFAP100Q494V2 611 aa6.72□□□□□ -1.33
SND1-216ENST00000492840 HP1BP3Q5SSJ5 553 aaPredicted RBP6.72□□□□□ -1.33
SND1-216ENST00000492840 KSR2Q6VAB6 950 aa6.72□□□□□ -1.33
SND1-216ENST00000492840 ADAT2Q7Z6V5 191 aaKnown RBP6.72□□□□□ -1.33
SND1-216ENST00000492840 PI4K2BQ8TCG2 481 aa6.72□□□□□ -1.33
SND1-216ENST00000492840 BTN2A2Q8WVV5 523 aa6.72□□□□□ -1.33
SND1-216ENST00000492840 KLHDC7BQ96G42 594 aa6.72□□□□□ -1.33
SND1-216ENST00000492840 RHOBTB2Q9BYZ6 727 aa6.72□□□□□ -1.33
SND1-216ENST00000492840 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.72□□□□□ -1.33
SND1-216ENST00000492840 CRTAC1Q9NQ79 661 aa6.72□□□□□ -1.33
SND1-216ENST00000492840 WHRNQ9P202 907 aa6.72□□□□□ -1.33
SND1-216ENST00000492840 EMC9Q9Y3B6 208 aa6.72□□□□□ -1.33
SND1-216ENST00000492840 ZNF451Q9Y4E5 1061 aa6.72□□□□□ -1.33
SND1-216ENST00000492840 SPEF1Q9Y4P9 236 aa6.72□□□□□ -1.33
SND1-216ENST00000492840 TNKSO95271 1327 aa6.72□□□□□ -1.33
SND1-216ENST00000492840 ATP10BO94823 1461 aa6.72□□□□□ -1.33
SND1-216ENST00000492840 SUPT6HQ7KZ85 1726 aaKnown RBP6.71□□□□□ -1.34
SND1-216ENST00000492840 ELOA3CA0A087WX78 387 aaPredicted RBP6.71□□□□□ -1.34
SND1-216ENST00000492840 TCRBV16S1A1N1A0A5B0 115 aa6.71□□□□□ -1.34
SND1-216ENST00000492840 GOLGA6CA6NDK9 693 aa6.71□□□□□ -1.34
SND1-216ENST00000492840 GOLGA6BA6NDN3 693 aa6.71□□□□□ -1.34
SND1-216ENST00000492840 ELOA3DA6NLF2 546 aaPredicted RBP6.71□□□□□ -1.34
SND1-216ENST00000492840 SHOXO15266 292 aa6.71□□□□□ -1.34
SND1-216ENST00000492840 RFPL1O75677 317 aa6.71□□□□□ -1.34
SND1-216ENST00000492840 PPM1BO75688 479 aa6.71□□□□□ -1.34
SND1-216ENST00000492840 GOLGA6DP0CG33 693 aa6.71□□□□□ -1.34
SND1-216ENST00000492840 FLT3P36888 993 aa6.71□□□□□ -1.34
SND1-216ENST00000492840 AFF1P51825 1210 aaKnown RBP6.71□□□□□ -1.34
SND1-216ENST00000492840 NLRP12P59046 1061 aa6.71□□□□□ -1.34
SND1-216ENST00000492840 ID3Q02535 119 aa6.71□□□□□ -1.34
SND1-216ENST00000492840 VPS72Q15906 364 aa6.71□□□□□ -1.34
SND1-216ENST00000492840 NTRK3Q16288 839 aa6.71□□□□□ -1.34
SND1-216ENST00000492840 NKG7Q16617 165 aa6.71□□□□□ -1.34
SND1-216ENST00000492840 GFOD2Q3B7J2 385 aa6.71□□□□□ -1.34
SND1-216ENST00000492840 ELOA3BQ3SY89 546 aa6.71□□□□□ -1.34
SND1-216ENST00000492840 CDCA2Q69YH5 1023 aaPredicted RBP6.71□□□□□ -1.34
SND1-216ENST00000492840 SLC4A10Q6U841 1118 aa6.71□□□□□ -1.34
SND1-216ENST00000492840 TICAM2Q86XR7 235 aa6.71□□□□□ -1.34
SND1-216ENST00000492840 ELOA3Q8NG57 546 aa6.71□□□□□ -1.34
SND1-216ENST00000492840 OR2W6PQ8NHA6 318 aa6.71□□□□□ -1.34
SND1-216ENST00000492840 ZNF507Q8TCN5 953 aa6.71□□□□□ -1.34
SND1-216ENST00000492840 CYB5D2Q8WUJ1 264 aa6.71□□□□□ -1.34
SND1-216ENST00000492840 JPH3Q8WXH2 748 aaPredicted RBP6.71□□□□□ -1.34
SND1-216ENST00000492840 PTPRN2Q92932 1015 aa6.71□□□□□ -1.34
SND1-216ENST00000492840 UBA5Q9GZZ9 404 aa6.71□□□□□ -1.34
SND1-216ENST00000492840 JPH1Q9HDC5 661 aaPredicted RBP6.71□□□□□ -1.34
SND1-216ENST00000492840 GOLGA6AQ9NYA3 693 aa6.71□□□□□ -1.34
SND1-216ENST00000492840 RGS17Q9UGC6 210 aaPredicted RBP6.71□□□□□ -1.34
SND1-216ENST00000492840 STARD13Q9Y3M8 1113 aa6.71□□□□□ -1.34
SND1-216ENST00000492840 TCOF1Q13428 1488 aaKnown RBP6.71□□□□□ -1.34
SND1-216ENST00000492840 SYNGAP1Q96PV0 1343 aa6.71□□□□□ -1.34
SND1-216ENST00000492840 REREQ9P2R6 1566 aa6.7□□□□□ -1.34
SND1-216ENST00000492840 ALKQ9UM73 1620 aa6.7□□□□□ -1.34
SND1-216ENST00000492840 CDC14CA4D256 554 aa6.7□□□□□ -1.34
SND1-216ENST00000492840 TMPRSS2O15393 492 aa6.7□□□□□ -1.34
SND1-216ENST00000492840 ZEB2O60315 1214 aa6.7□□□□□ -1.34
SND1-216ENST00000492840 DGAT1O75907 488 aa6.7□□□□□ -1.34
SND1-216ENST00000492840 FBXO21O94952 628 aa6.7□□□□□ -1.34
SND1-216ENST00000492840 DLGAP3O95886 979 aa6.7□□□□□ -1.34
SND1-216ENST00000492840 CD247P20963 164 aa6.7□□□□□ -1.34
SND1-216ENST00000492840 PAX3P23760 479 aa6.7□□□□□ -1.34
SND1-216ENST00000492840 GFRA1P56159 465 aa6.7□□□□□ -1.34
SND1-216ENST00000492840 SUZ12Q15022 739 aaKnown RBP6.7□□□□□ -1.34
SND1-216ENST00000492840 SF1Q15637 639 aaKnown RBP6.7□□□□□ -1.34
SND1-216ENST00000492840 ANKRD39Q53RE8 183 aa6.7□□□□□ -1.34
SND1-216ENST00000492840 DGKHQ86XP1 1220 aa6.7□□□□□ -1.34
SND1-216ENST00000492840 CRACR2BQ8N4Y2 399 aaPredicted RBP6.7□□□□□ -1.34
SND1-216ENST00000492840 KLHL23Q8NBE8 558 aa6.7□□□□□ -1.34
SND1-216ENST00000492840 ADCY4Q8NFM4 1077 aa6.7□□□□□ -1.34
SND1-216ENST00000492840 SVIPQ8NHG7 77 aa6.7□□□□□ -1.34
SND1-216ENST00000492840 RCC1LQ96I51 464 aaKnown RBP6.7□□□□□ -1.34
SND1-216ENST00000492840 MKRN2Q9H000 416 aaKnown RBP6.7□□□□□ -1.34
SND1-216ENST00000492840 ENAMQ9NRM1 1142 aa6.7□□□□□ -1.34
SND1-216ENST00000492840 AKT3Q9Y243 479 aa6.7□□□□□ -1.34
SND1-216ENST00000492840 MYO3AQ8NEV4 1616 aa6.69□□□□□ -1.34
SND1-216ENST00000492840 NPATQ14207 1427 aa6.69□□□□□ -1.34
SND1-216ENST00000492840 RAPGEF2Q9Y4G8 1499 aa6.69□□□□□ -1.34
SND1-216ENST00000492840 NEURL1BA8MQ27 555 aa6.69□□□□□ -1.34
SND1-216ENST00000492840 IFRD1O00458 451 aaPredicted RBP6.69□□□□□ -1.34
SND1-216ENST00000492840 ZSCAN20P17040 1043 aaPredicted RBP6.69□□□□□ -1.34
SND1-216ENST00000492840 CAP2P40123 477 aa6.69□□□□□ -1.34
SND1-216ENST00000492840 MAP4K2Q12851 820 aa6.69□□□□□ -1.34
SND1-216ENST00000492840 DHX8Q14562 1220 aaKnown RBP6.69□□□□□ -1.34
SND1-216ENST00000492840 SETDB1Q15047 1291 aa6.69□□□□□ -1.34
SND1-216ENST00000492840 RALBP1Q15311 655 aa6.69□□□□□ -1.34
SND1-216ENST00000492840 SKOR2Q2VWA4 1001 aaPredicted RBP6.69□□□□□ -1.34
SND1-216ENST00000492840 LONRF3Q496Y0 759 aa6.69□□□□□ -1.34
SND1-216ENST00000492840 PIK3R6Q5UE93 754 aa6.69□□□□□ -1.34
SND1-216ENST00000492840 CXorf57Q6NSI4 855 aaKnown RBP6.69□□□□□ -1.34
SND1-216ENST00000492840 POMZP3Q6PJE2 187 aa6.69□□□□□ -1.34
SND1-216ENST00000492840 C20orf204Q6ZNR8 217 aa6.69□□□□□ -1.34
SND1-216ENST00000492840 UBE2R2Q712K3 238 aaPredicted RBP6.69□□□□□ -1.34
SND1-216ENST00000492840 MAMDC2Q7Z304 686 aaPredicted RBP6.69□□□□□ -1.34
SND1-216ENST00000492840 UBE3DQ7Z6J8 389 aa6.69□□□□□ -1.34
SND1-216ENST00000492840 ANKLE2Q86XL3 938 aa6.69□□□□□ -1.34
SND1-216ENST00000492840 C7orf61Q8IZ16 206 aa6.69□□□□□ -1.34
SND1-216ENST00000492840 ARHGEF39Q8N4T4 335 aa6.69□□□□□ -1.34
SND1-216ENST00000492840 KCTD13Q8WZ19 329 aa6.69□□□□□ -1.34
SND1-216ENST00000492840 MAGEB10Q96LZ2 347 aaPredicted RBP6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms