RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 RNF146Q9NTX7 359 aa19.47■□□□□ 0.71
PDLIM2-217ENST00000491330 CCPG1Q9ULG6 757 aa19.47■□□□□ 0.71
PDLIM2-217ENST00000491330 PRR12Q9ULL5 1215 aa19.47■□□□□ 0.71
PDLIM2-217ENST00000491330 RIPK3Q9Y572 518 aa19.47■□□□□ 0.71
PDLIM2-217ENST00000491330 ZNF236Q9UL36 1845 aa19.46■□□□□ 0.71
PDLIM2-217ENST00000491330 B4DLN1 442 aa19.46■□□□□ 0.71
PDLIM2-217ENST00000491330 FOXP2O15409 715 aa19.46■□□□□ 0.71
PDLIM2-217ENST00000491330 NMT2O60551 498 aa19.46■□□□□ 0.71
PDLIM2-217ENST00000491330 SYN1P17600 705 aa19.46■□□□□ 0.71
PDLIM2-217ENST00000491330 FXR1P51114 621 aaKnown RBP eCLIP19.46■□□□□ 0.71
PDLIM2-217ENST00000491330 MRPL12P52815 198 aaKnown RBP19.46■□□□□ 0.71
PDLIM2-217ENST00000491330 TRDNQ13061 729 aa19.46■□□□□ 0.71
PDLIM2-217ENST00000491330 LRRC41Q15345 812 aa19.46■□□□□ 0.71
PDLIM2-217ENST00000491330 LRRC26Q2I0M4 334 aa19.46■□□□□ 0.71
PDLIM2-217ENST00000491330 GPATCH4Q5T3I0 446 aaKnown RBP19.46■□□□□ 0.71
PDLIM2-217ENST00000491330 CCDC174Q6PII3 467 aa19.46■□□□□ 0.71
PDLIM2-217ENST00000491330 DGKHQ86XP1 1220 aa19.46■□□□□ 0.71
PDLIM2-217ENST00000491330 TMEM47Q9BQJ4 181 aa19.46■□□□□ 0.71
PDLIM2-217ENST00000491330 KAT14Q9H8E8 782 aa19.46■□□□□ 0.71
PDLIM2-217ENST00000491330 DNAJC25-GNG10A0A024R161 153 aa19.45■□□□□ 0.7
PDLIM2-217ENST00000491330 ACVR2BQ13705 512 aa19.45■□□□□ 0.7
PDLIM2-217ENST00000491330 NOL8Q76FK4 1167 aaKnown RBP19.45■□□□□ 0.7
PDLIM2-217ENST00000491330 PCSK9Q8NBP7 692 aaKnown RBP19.45■□□□□ 0.7
PDLIM2-217ENST00000491330 TSEN34Q9BSV6 310 aaKnown RBP19.45■□□□□ 0.7
PDLIM2-217ENST00000491330 ADD3Q9UEY8 706 aaKnown RBP19.45■□□□□ 0.7
PDLIM2-217ENST00000491330 ATP11BQ9Y2G3 1177 aa19.45■□□□□ 0.7
PDLIM2-217ENST00000491330 A0A0G2JMZ2 1700 aa19.45■□□□□ 0.7
PDLIM2-217ENST00000491330 ICAM1P05362 532 aa19.44■□□□□ 0.7
PDLIM2-217ENST00000491330 ADCYAP1R1P41586 468 aa19.44■□□□□ 0.7
PDLIM2-217ENST00000491330 NOVP48745 357 aa19.44■□□□□ 0.7
PDLIM2-217ENST00000491330 SYDE2Q5VT97 1194 aa19.44■□□□□ 0.7
PDLIM2-217ENST00000491330 SLC39A5Q6ZMH5 540 aa19.44■□□□□ 0.7
PDLIM2-217ENST00000491330 AGBL1Q96MI9 1066 aa19.44■□□□□ 0.7
PDLIM2-217ENST00000491330 UBAC1Q9BSL1 405 aa19.44■□□□□ 0.7
PDLIM2-217ENST00000491330 GPCPD1Q9NPB8 672 aa19.44■□□□□ 0.7
PDLIM2-217ENST00000491330 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.44■□□□□ 0.7
PDLIM2-217ENST00000491330 GREB1LQ9C091 1923 aaPredicted RBP19.44■□□□□ 0.7
PDLIM2-217ENST00000491330 ZNF865P0CJ78 1059 aaPredicted RBP19.43■□□□□ 0.7
PDLIM2-217ENST00000491330 RTP1P59025 263 aa19.43■□□□□ 0.7
PDLIM2-217ENST00000491330 NSMFQ6X4W1 530 aa19.43■□□□□ 0.7
PDLIM2-217ENST00000491330 GDF15Q99988 308 aa19.43■□□□□ 0.7
PDLIM2-217ENST00000491330 RAD50Q92878 1312 aa19.43■□□□□ 0.7
PDLIM2-217ENST00000491330 CENPFP49454 3210 aa19.42■□□□□ 0.7
PDLIM2-217ENST00000491330 MOXD2PA6NHM9 499 aa19.42■□□□□ 0.7
PDLIM2-217ENST00000491330 DUSP11O75319 330 aaKnown RBP19.42■□□□□ 0.7
PDLIM2-217ENST00000491330 MAGEA10P43363 369 aaPredicted RBP19.42■□□□□ 0.7
PDLIM2-217ENST00000491330 TTC22Q5TAA0 569 aa19.42■□□□□ 0.7
PDLIM2-217ENST00000491330 BTNL9Q6UXG8 535 aa19.42■□□□□ 0.7
PDLIM2-217ENST00000491330 ARMCX2Q7L311 632 aa19.42■□□□□ 0.7
PDLIM2-217ENST00000491330 FERMT2Q96AC1 680 aa19.42■□□□□ 0.7
PDLIM2-217ENST00000491330 VTI1AQ96AJ9 217 aa19.42■□□□□ 0.7
PDLIM2-217ENST00000491330 GLT1D1Q96MS3 346 aa19.42■□□□□ 0.7
PDLIM2-217ENST00000491330 ERICH2A1L162 156 aa19.41■□□□□ 0.7
PDLIM2-217ENST00000491330 ZEB2O60315 1214 aa19.41■□□□□ 0.7
PDLIM2-217ENST00000491330 KDM4AO75164 1064 aa19.41■□□□□ 0.7
PDLIM2-217ENST00000491330 PGK1P00558 417 aa19.41■□□□□ 0.7
PDLIM2-217ENST00000491330 C1orf53Q5VUE5 145 aa19.41■□□□□ 0.7
PDLIM2-217ENST00000491330 TDHQ8IZJ6 230 aa19.41■□□□□ 0.7
PDLIM2-217ENST00000491330 AP5M1Q9H0R1 490 aa19.41■□□□□ 0.7
PDLIM2-217ENST00000491330 A1CFQ9NQ94 594 aaKnown RBP19.41■□□□□ 0.7
PDLIM2-217ENST00000491330 PRDM5Q9NQX1 630 aaPredicted RBP19.41■□□□□ 0.7
PDLIM2-217ENST00000491330 STARD7Q9NQZ5 370 aa19.41■□□□□ 0.7
PDLIM2-217ENST00000491330 PHF24Q9UPV7 400 aa19.41■□□□□ 0.7
PDLIM2-217ENST00000491330 TACC3Q9Y6A5 838 aa19.41■□□□□ 0.7
PDLIM2-217ENST00000491330 U3KPZ7 1027 aaPredicted RBP19.41■□□□□ 0.7
PDLIM2-217ENST00000491330 FRMPD2Q68DX3 1309 aaPredicted RBP19.41■□□□□ 0.7
PDLIM2-217ENST00000491330 LOC102724159A0A0B4J2E5 919 aa19.4■□□□□ 0.7
PDLIM2-217ENST00000491330 DCDC2CA8MYV0 355 aa19.4■□□□□ 0.7
PDLIM2-217ENST00000491330 DHX16O60231 1041 aaKnown RBP19.4■□□□□ 0.7
PDLIM2-217ENST00000491330 SNAI1O95863 264 aaPredicted RBP19.4■□□□□ 0.7
PDLIM2-217ENST00000491330 C6orf222P0C671 652 aaPredicted RBP19.4■□□□□ 0.7
PDLIM2-217ENST00000491330 PDHBP11177 359 aa19.4■□□□□ 0.7
PDLIM2-217ENST00000491330 SLC16A2P36021 539 aa19.4■□□□□ 0.7
PDLIM2-217ENST00000491330 IRX6P78412 446 aaPredicted RBP19.4■□□□□ 0.7
PDLIM2-217ENST00000491330 PWP2Q15269 919 aaKnown RBP19.4■□□□□ 0.7
PDLIM2-217ENST00000491330 CCDC144CPQ8IYA2 1237 aa19.4■□□□□ 0.7
PDLIM2-217ENST00000491330 ZSCAN10Q96SZ4 725 aaPredicted RBP19.4■□□□□ 0.7
PDLIM2-217ENST00000491330 RANBP17Q9H2T7 1088 aaKnown RBP19.4■□□□□ 0.7
PDLIM2-217ENST00000491330 PRO3102Q9H379 93 aa19.4■□□□□ 0.7
PDLIM2-217ENST00000491330 RLFQ13129 1914 aa19.4■□□□□ 0.7
PDLIM2-217ENST00000491330 PTPDC1A2A3K4 754 aa19.39■□□□□ 0.69
PDLIM2-217ENST00000491330 TAL1P17542 331 aaPredicted RBP19.39■□□□□ 0.69
PDLIM2-217ENST00000491330 ZNF543Q08ER8 600 aa19.39■□□□□ 0.69
PDLIM2-217ENST00000491330 TRAF1Q13077 416 aa19.39■□□□□ 0.69
PDLIM2-217ENST00000491330 SART3Q15020 963 aaKnown RBP19.39■□□□□ 0.69
PDLIM2-217ENST00000491330 CCDC144BQ3MJ40 725 aa19.39■□□□□ 0.69
PDLIM2-217ENST00000491330 KIAA1211Q6ZU35 1233 aa19.39■□□□□ 0.69
PDLIM2-217ENST00000491330 TBC1D10CQ8IV04 446 aa19.39■□□□□ 0.69
PDLIM2-217ENST00000491330 FAM133AQ8N9E0 248 aa19.39■□□□□ 0.69
PDLIM2-217ENST00000491330 PNMA1Q8ND90 353 aa19.39■□□□□ 0.69
PDLIM2-217ENST00000491330 CYP39A1Q9NYL5 469 aa19.39■□□□□ 0.69
PDLIM2-217ENST00000491330 ZNF536O15090 1300 aa19.39■□□□□ 0.69
PDLIM2-217ENST00000491330 MROH7Q68CQ1 1323 aa19.39■□□□□ 0.69
PDLIM2-217ENST00000491330 ACLYP53396 1101 aa19.38■□□□□ 0.69
PDLIM2-217ENST00000491330 MDM2Q00987 491 aaPredicted RBP19.38■□□□□ 0.69
PDLIM2-217ENST00000491330 CNTN2Q02246 1040 aa19.38■□□□□ 0.69
PDLIM2-217ENST00000491330 TNFAIP2Q03169 654 aa19.38■□□□□ 0.69
PDLIM2-217ENST00000491330 ASPRV1Q53RT3 343 aa19.38■□□□□ 0.69
PDLIM2-217ENST00000491330 GNASQ5JWF2 1037 aa19.38■□□□□ 0.69
PDLIM2-217ENST00000491330 TTBK2Q6IQ55 1244 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms