RNA–Protein interactions for RNA: ENST00000491292.5

ERCC3-208, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 4,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-208ENST00000491292 AMOTL1Q8IY63 956 aa10.93□□□□□ -0.66
ERCC3-208ENST00000491292 GPR108Q9NPR9 543 aa10.93□□□□□ -0.66
ERCC3-208ENST00000491292 LUC7LQ9NQ29 371 aaKnown RBP10.93□□□□□ -0.66
ERCC3-208ENST00000491292 ODF2LQ9ULJ1 636 aa10.93□□□□□ -0.66
ERCC3-208ENST00000491292 CEP104O60308 925 aa10.92□□□□□ -0.66
ERCC3-208ENST00000491292 ARHGAP25P42331 645 aa10.92□□□□□ -0.66
ERCC3-208ENST00000491292 RPGRIP1Q96KN7 1286 aa10.92□□□□□ -0.66
ERCC3-208ENST00000491292 CNOT6LQ96LI5 555 aaKnown RBP10.92□□□□□ -0.66
ERCC3-208ENST00000491292 TMOD3Q9NYL9 352 aa10.92□□□□□ -0.66
ERCC3-208ENST00000491292 SOS2Q07890 1332 aaPredicted RBP10.92□□□□□ -0.66
ERCC3-208ENST00000491292 ANKARQ7Z5J8 1434 aa10.92□□□□□ -0.66
ERCC3-208ENST00000491292 PDE2AO00408 941 aaPredicted RBP10.92□□□□□ -0.66
ERCC3-208ENST00000491292 ATF3P18847 181 aa10.92□□□□□ -0.66
ERCC3-208ENST00000491292 PEX19P40855 299 aa10.92□□□□□ -0.66
ERCC3-208ENST00000491292 DNM2P50570 870 aa10.92□□□□□ -0.66
ERCC3-208ENST00000491292 MDM2Q00987 491 aaPredicted RBP10.92□□□□□ -0.66
ERCC3-208ENST00000491292 INF2Q27J81 1249 aa10.92□□□□□ -0.66
ERCC3-208ENST00000491292 TCERG1LQ5VWI1 586 aa10.92□□□□□ -0.66
ERCC3-208ENST00000491292 DNAJC10Q8IXB1 793 aa10.92□□□□□ -0.66
ERCC3-208ENST00000491292 TRIM58Q8NG06 486 aa10.92□□□□□ -0.66
ERCC3-208ENST00000491292 DYDC1Q8WWB3 177 aa10.92□□□□□ -0.66
ERCC3-208ENST00000491292 TACO1Q9BSH4 297 aaKnown RBP10.92□□□□□ -0.66
ERCC3-208ENST00000491292 UBXN6Q9BZV1 441 aa10.92□□□□□ -0.66
ERCC3-208ENST00000491292 UBA5Q9GZZ9 404 aa10.92□□□□□ -0.66
ERCC3-208ENST00000491292 MAGEB6P1A0A0J9YX57 407 aa10.92□□□□□ -0.66
ERCC3-208ENST00000491292 CYP27B1O15528 508 aa10.92□□□□□ -0.66
ERCC3-208ENST00000491292 MYCNP04198 464 aaPredicted RBP10.92□□□□□ -0.66
ERCC3-208ENST00000491292 AATFQ9NY61 560 aaKnown RBP eCLIP10.92□□□□□ -0.66
ERCC3-208ENST00000491292 RWDD2AQ9UIY3 292 aa10.92□□□□□ -0.66
ERCC3-208ENST00000491292 HYOU1Q9Y4L1 999 aa10.92□□□□□ -0.66
ERCC3-208ENST00000491292 DIP2BQ9P265 1576 aa10.91□□□□□ -0.66
ERCC3-208ENST00000491292 EIF3HO15372 352 aaKnown RBP eCLIP10.91□□□□□ -0.66
ERCC3-208ENST00000491292 NR1D1P20393 614 aa10.91□□□□□ -0.66
ERCC3-208ENST00000491292 IGHMBP2P38935 993 aaKnown RBP10.91□□□□□ -0.66
ERCC3-208ENST00000491292 FAM114A1Q8IWE2 563 aa10.91□□□□□ -0.66
ERCC3-208ENST00000491292 SPATA4Q8NEY3 305 aa10.91□□□□□ -0.66
ERCC3-208ENST00000491292 ZSCAN5CA6NGD5 496 aaPredicted RBP10.91□□□□□ -0.66
ERCC3-208ENST00000491292 HSPA2P54652 639 aa10.91□□□□□ -0.66
ERCC3-208ENST00000491292 PAK2Q13177 524 aa10.91□□□□□ -0.66
ERCC3-208ENST00000491292 NTRK3Q16288 839 aa10.91□□□□□ -0.66
ERCC3-208ENST00000491292 CFAP221Q4G0U5 840 aa10.91□□□□□ -0.66
ERCC3-208ENST00000491292 NAA35Q5VZE5 725 aa10.91□□□□□ -0.66
ERCC3-208ENST00000491292 RPAINQ86UA6 219 aa10.91□□□□□ -0.66
ERCC3-208ENST00000491292 OR2W6PQ8NHA6 318 aa10.91□□□□□ -0.66
ERCC3-208ENST00000491292 NOX5Q96PH1 765 aa10.91□□□□□ -0.66
ERCC3-208ENST00000491292 KANSL2Q9H9L4 492 aa10.91□□□□□ -0.66
ERCC3-208ENST00000491292 MKNK2Q9HBH9 465 aa10.91□□□□□ -0.66
ERCC3-208ENST00000491292 SMIM22K7EJ46 135 aa10.91□□□□□ -0.66
ERCC3-208ENST00000491292 PPP1R12BO60237 982 aaPredicted RBP10.91□□□□□ -0.66
ERCC3-208ENST00000491292 STARD3NLO95772 234 aa10.91□□□□□ -0.66
ERCC3-208ENST00000491292 EPHB4P54760 987 aa10.91□□□□□ -0.66
ERCC3-208ENST00000491292 SOGA3Q5TF21 947 aa10.91□□□□□ -0.66
ERCC3-208ENST00000491292 ZNF658Q5TYW1 1059 aaPredicted RBP10.91□□□□□ -0.66
ERCC3-208ENST00000491292 KAT2BQ92831 832 aa10.91□□□□□ -0.66
ERCC3-208ENST00000491292 DPH5Q9H2P9 285 aa10.91□□□□□ -0.66
ERCC3-208ENST00000491292 ATG3Q9NT62 314 aa10.91□□□□□ -0.66
ERCC3-208ENST00000491292 STIM2Q9P246 746 aa10.91□□□□□ -0.66
ERCC3-208ENST00000491292 DIP2CQ9Y2E4 1556 aa10.9□□□□□ -0.66
ERCC3-208ENST00000491292 CPDO75976 1380 aa10.9□□□□□ -0.66
ERCC3-208ENST00000491292 NMT2O60551 498 aa10.9□□□□□ -0.66
ERCC3-208ENST00000491292 CLTAP09496 248 aa10.9□□□□□ -0.66
ERCC3-208ENST00000491292 CTNNA1P35221 906 aaKnown RBP10.9□□□□□ -0.66
ERCC3-208ENST00000491292 LRRC41Q15345 812 aa10.9□□□□□ -0.66
ERCC3-208ENST00000491292 PPP1R7Q15435 360 aa10.9□□□□□ -0.66
ERCC3-208ENST00000491292 TRAPPC11Q7Z392 1133 aa10.9□□□□□ -0.66
ERCC3-208ENST00000491292 FAM217BQ9NTX9 383 aaPredicted RBP10.9□□□□□ -0.66
ERCC3-208ENST00000491292 GEMIN8Q9NWZ8 242 aaKnown RBP10.9□□□□□ -0.66
ERCC3-208ENST00000491292 SUFUQ9UMX1 484 aa10.9□□□□□ -0.66
ERCC3-208ENST00000491292 RIPOR2Q9Y4F9 1068 aa10.9□□□□□ -0.66
ERCC3-208ENST00000491292 GCOM1H8Y6P7 765 aaPredicted RBP10.9□□□□□ -0.66
ERCC3-208ENST00000491292 MYZAPP0CAP1 466 aa10.9□□□□□ -0.66
ERCC3-208ENST00000491292 LIFRP42702 1097 aa10.9□□□□□ -0.66
ERCC3-208ENST00000491292 HERVK_113P62684 666 aa10.9□□□□□ -0.66
ERCC3-208ENST00000491292 KRT71Q3SY84 523 aa10.9□□□□□ -0.66
ERCC3-208ENST00000491292 ZCRB1Q8TBF4 217 aaKnown RBP10.9□□□□□ -0.66
ERCC3-208ENST00000491292 KCNK3O14649 394 aa10.9□□□□□ -0.67
ERCC3-208ENST00000491292 TXKP42681 527 aa10.9□□□□□ -0.67
ERCC3-208ENST00000491292 CARSP49589 748 aaKnown RBP10.9□□□□□ -0.67
ERCC3-208ENST00000491292 UBE3CQ15386 1083 aa10.9□□□□□ -0.67
ERCC3-208ENST00000491292 WDR93Q6P2C0 686 aa10.9□□□□□ -0.67
ERCC3-208ENST00000491292 NELFCDQ8IXH7 590 aa10.9□□□□□ -0.67
ERCC3-208ENST00000491292 TCP11Q8WWU5 503 aa10.9□□□□□ -0.67
ERCC3-208ENST00000491292 ZIM3Q96PE6 472 aa10.9□□□□□ -0.67
ERCC3-208ENST00000491292 TSGA10Q9BZW7 698 aa10.9□□□□□ -0.67
ERCC3-208ENST00000491292 PCDHA13Q9Y5I0 950 aa10.9□□□□□ -0.67
ERCC3-208ENST00000491292 USP17L12C9JPN9 530 aa10.89□□□□□ -0.67
ERCC3-208ENST00000491292 USP17L21D6R901 530 aa10.89□□□□□ -0.67
ERCC3-208ENST00000491292 TRAF5O00463 557 aa10.89□□□□□ -0.67
ERCC3-208ENST00000491292 DYNLL1P63167 89 aaKnown RBP10.89□□□□□ -0.67
ERCC3-208ENST00000491292 SAMD1Q6SPF0 538 aaPredicted RBP10.89□□□□□ -0.67
ERCC3-208ENST00000491292 RNPC3Q96LT9 517 aaKnown RBP10.89□□□□□ -0.67
ERCC3-208ENST00000491292 SPAG5Q96R06 1193 aa10.89□□□□□ -0.67
ERCC3-208ENST00000491292 LGALS16A8MUM7 142 aa10.89□□□□□ -0.67
ERCC3-208ENST00000491292 VIMP08670 466 aaKnown RBP10.89□□□□□ -0.67
ERCC3-208ENST00000491292 SARSP49591 514 aaKnown RBP10.89□□□□□ -0.67
ERCC3-208ENST00000491292 KIF11P52732 1056 aa10.89□□□□□ -0.67
ERCC3-208ENST00000491292 TTLL11Q8NHH1 800 aa10.89□□□□□ -0.67
ERCC3-208ENST00000491292 CALML4Q96GE6 196 aa10.89□□□□□ -0.67
ERCC3-208ENST00000491292 OSBPL9Q96SU4 736 aa10.89□□□□□ -0.67
ERCC3-208ENST00000491292 VEZTQ9HBM0 779 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms