RNA–Protein interactions for RNA: ENST00000489535.2

SMC6-209, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 550 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-209ENST00000489535 LDHAL6AQ6ZMR3 332 aa9.41□□□□□ -0.9
SMC6-209ENST00000489535 FAM20CQ8IXL6 584 aa9.41□□□□□ -0.9
SMC6-209ENST00000489535 FAM83CQ9BQN1 747 aa9.41□□□□□ -0.9
SMC6-209ENST00000489535 UPF2Q9HAU5 1272 aaKnown RBP9.41□□□□□ -0.9
SMC6-209ENST00000489535 GPR108Q9NPR9 543 aa9.41□□□□□ -0.9
SMC6-209ENST00000489535 SEC31BQ9NQW1 1179 aa9.41□□□□□ -0.9
SMC6-209ENST00000489535 CNNM1Q9NRU3 951 aa9.41□□□□□ -0.9
SMC6-209ENST00000489535 TFCP2L1Q9NZI6 479 aa9.41□□□□□ -0.9
SMC6-209ENST00000489535 KIAA1551Q9HCM1 1747 aa9.41□□□□□ -0.9
SMC6-209ENST00000489535 MAST2Q6P0Q8 1798 aa9.4□□□□□ -0.9
SMC6-209ENST00000489535 IGHMBP2P38935 993 aaKnown RBP9.4□□□□□ -0.9
SMC6-209ENST00000489535 ANP32AP39687 249 aaKnown RBP9.4□□□□□ -0.9
SMC6-209ENST00000489535 SF3B2Q13435 895 aaKnown RBP9.4□□□□□ -0.9
SMC6-209ENST00000489535 SF3B3Q15393 1217 aaKnown RBP9.4□□□□□ -0.9
SMC6-209ENST00000489535 EZH2Q15910 746 aaKnown RBP9.4□□□□□ -0.9
SMC6-209ENST00000489535 METTL24Q5JXM2 366 aa9.4□□□□□ -0.9
SMC6-209ENST00000489535 CASC1Q6TDU7 716 aa9.4□□□□□ -0.9
SMC6-209ENST00000489535 CBLL1Q75N03 491 aa9.4□□□□□ -0.9
SMC6-209ENST00000489535 CNTROBQ8N137 903 aa9.4□□□□□ -0.9
SMC6-209ENST00000489535 NEUROD6Q96NK8 337 aa9.4□□□□□ -0.9
SMC6-209ENST00000489535 HINFPQ9BQA5 517 aa9.4□□□□□ -0.9
SMC6-209ENST00000489535 DBNLQ9UJU6 430 aaKnown RBP9.4□□□□□ -0.9
SMC6-209ENST00000489535 AKAP2Q9Y2D5 859 aa9.4□□□□□ -0.9
SMC6-209ENST00000489535 CDK5RAP2Q96SN8 1893 aa9.39□□□□□ -0.91
SMC6-209ENST00000489535 A0A1B0GUL7 405 aa9.39□□□□□ -0.91
SMC6-209ENST00000489535 TIMM10P62072 90 aa9.39□□□□□ -0.91
SMC6-209ENST00000489535 C11orf91Q3C1V1 193 aa9.39□□□□□ -0.91
SMC6-209ENST00000489535 TXNDC11Q6PKC3 985 aa9.39□□□□□ -0.91
SMC6-209ENST00000489535 COL23A1Q86Y22 540 aaPredicted RBP9.39□□□□□ -0.91
SMC6-209ENST00000489535 FLAD1Q8NFF5 587 aa9.39□□□□□ -0.91
SMC6-209ENST00000489535 POM121Q96HA1 1249 aa9.39□□□□□ -0.91
SMC6-209ENST00000489535 CAMKK2Q96RR4 588 aa9.39□□□□□ -0.91
SMC6-209ENST00000489535 CDC5LQ99459 802 aaKnown RBP9.39□□□□□ -0.91
SMC6-209ENST00000489535 MPHOSPH8Q99549 860 aa9.39□□□□□ -0.91
SMC6-209ENST00000489535 RIPOR2Q9Y4F9 1068 aa9.39□□□□□ -0.91
SMC6-209ENST00000489535 KCNMB2Q9Y691 235 aa9.39□□□□□ -0.91
SMC6-209ENST00000489535 LTBP1Q14766 1721 aa9.39□□□□□ -0.91
SMC6-209ENST00000489535 MROH5Q6ZUA9 1318 aa9.38□□□□□ -0.91
SMC6-209ENST00000489535 PNPLA7Q6ZV29 1317 aa9.38□□□□□ -0.91
SMC6-209ENST00000489535 EIF5BO60841 1220 aaKnown RBP9.38□□□□□ -0.91
SMC6-209ENST00000489535 SERPINB2P05120 415 aa9.38□□□□□ -0.91
SMC6-209ENST00000489535 TM4SF1P30408 202 aa9.38□□□□□ -0.91
SMC6-209ENST00000489535 ATP2B3Q16720 1220 aa9.38□□□□□ -0.91
SMC6-209ENST00000489535 PRR5LQ6MZQ0 368 aa9.38□□□□□ -0.91
SMC6-209ENST00000489535 CNBD1Q8NA66 436 aa9.38□□□□□ -0.91
SMC6-209ENST00000489535 MYO19Q96H55 970 aa9.38□□□□□ -0.91
SMC6-209ENST00000489535 BOLA2Q9H3K6 86 aa9.38□□□□□ -0.91
SMC6-209ENST00000489535 MYH2Q9UKX2 1941 aa9.38□□□□□ -0.91
SMC6-209ENST00000489535 SLX4Q8IY92 1834 aa9.38□□□□□ -0.91
SMC6-209ENST00000489535 BRCA1P38398 1863 aaKnown RBP9.37□□□□□ -0.91
SMC6-209ENST00000489535 PDE8BO95263 885 aa9.37□□□□□ -0.91
SMC6-209ENST00000489535 ATP5JP18859 108 aa9.37□□□□□ -0.91
SMC6-209ENST00000489535 CHMLP26374 656 aa9.37□□□□□ -0.91
SMC6-209ENST00000489535 ST5P78524 1137 aa9.37□□□□□ -0.91
SMC6-209ENST00000489535 GORABQ5T7V8 394 aa9.37□□□□□ -0.91
SMC6-209ENST00000489535 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.37□□□□□ -0.91
SMC6-209ENST00000489535 ANKRD18AQ8IVF6 992 aa9.37□□□□□ -0.91
SMC6-209ENST00000489535 CMTR1Q8N1G2 835 aaKnown RBP9.37□□□□□ -0.91
SMC6-209ENST00000489535 VGLL2Q8N8G2 317 aa9.37□□□□□ -0.91
SMC6-209ENST00000489535 EVI5LQ96CN4 794 aa9.37□□□□□ -0.91
SMC6-209ENST00000489535 TBC1D32Q96NH3 1257 aa9.37□□□□□ -0.91
SMC6-209ENST00000489535 C22orf23Q9BZE7 217 aa9.37□□□□□ -0.91
SMC6-209ENST00000489535 STK32BQ9NY57 414 aa9.37□□□□□ -0.91
SMC6-209ENST00000489535 WDR64B1ANS9 1081 aa9.36□□□□□ -0.91
SMC6-209ENST00000489535 POLRMTO00411 1230 aaKnown RBP9.36□□□□□ -0.91
SMC6-209ENST00000489535 ADORA1P30542 326 aa9.36□□□□□ -0.91
SMC6-209ENST00000489535 DDR1Q08345 913 aa9.36□□□□□ -0.91
SMC6-209ENST00000489535 SLC15A2Q16348 729 aa9.36□□□□□ -0.91
SMC6-209ENST00000489535 TTC39AQ5SRH9 613 aa9.36□□□□□ -0.91
SMC6-209ENST00000489535 BEND4Q6ZU67 534 aa9.36□□□□□ -0.91
SMC6-209ENST00000489535 DDX46Q7L014 1031 aaKnown RBP9.36□□□□□ -0.91
SMC6-209ENST00000489535 DEFB132Q7Z7B7 95 aa9.36□□□□□ -0.91
SMC6-209ENST00000489535 RGL4Q8IZJ4 473 aa9.36□□□□□ -0.91
SMC6-209ENST00000489535 FOXD4L4Q8WXT5 416 aaPredicted RBP9.36□□□□□ -0.91
SMC6-209ENST00000489535 CELF1Q92879 486 aaKnown RBP9.36□□□□□ -0.91
SMC6-209ENST00000489535 DNAJC2Q99543 621 aaKnown RBP9.36□□□□□ -0.91
SMC6-209ENST00000489535 BAZ2AQ9UIF9 1905 aaKnown RBP9.36□□□□□ -0.91
SMC6-209ENST00000489535 PSME4Q14997 1843 aa9.35□□□□□ -0.91
SMC6-209ENST00000489535 TAF5LO75529 589 aa9.35□□□□□ -0.91
SMC6-209ENST00000489535 IFIT1P09914 478 aaKnown RBP9.35□□□□□ -0.91
SMC6-209ENST00000489535 BMP3P12645 472 aa9.35□□□□□ -0.91
SMC6-209ENST00000489535 SLC5A1P13866 664 aa9.35□□□□□ -0.91
SMC6-209ENST00000489535 CHRNDQ07001 517 aa9.35□□□□□ -0.91
SMC6-209ENST00000489535 PUM3Q15397 648 aaKnown RBP9.35□□□□□ -0.91
SMC6-209ENST00000489535 DUOXA2Q1HG44 320 aa9.35□□□□□ -0.91
SMC6-209ENST00000489535 CCDC158Q5M9N0 1113 aa9.35□□□□□ -0.91
SMC6-209ENST00000489535 ADAMTSL4Q6UY14 1074 aa9.35□□□□□ -0.91
SMC6-209ENST00000489535 NFXL1Q6ZNB6 911 aa9.35□□□□□ -0.91
SMC6-209ENST00000489535 NLGN1Q8N2Q7 840 aa9.35□□□□□ -0.91
SMC6-209ENST00000489535 COL26A1Q96A83 441 aa9.35□□□□□ -0.91
SMC6-209ENST00000489535 HAUS7Q99871 368 aa9.35□□□□□ -0.91
SMC6-209ENST00000489535 FSD1Q9BTV5 496 aa9.35□□□□□ -0.91
SMC6-209ENST00000489535 DIAPH3Q9NSV4 1193 aa9.35□□□□□ -0.91
SMC6-209ENST00000489535 PIM2Q9P1W9 311 aa9.35□□□□□ -0.91
SMC6-209ENST00000489535 ECM29Q5VYK3 1845 aa9.35□□□□□ -0.91
SMC6-209ENST00000489535 LAMB1P07942 1786 aa9.35□□□□□ -0.91
SMC6-209ENST00000489535 ZNF646O15015 1829 aaPredicted RBP9.34□□□□□ -0.91
SMC6-209ENST00000489535 HIP1O00291 1037 aa9.34□□□□□ -0.91
SMC6-209ENST00000489535 ADAM11O75078 769 aa9.34□□□□□ -0.91
SMC6-209ENST00000489535 REC8O95072 547 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms