RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 ADGRF4Q8IZF3 695 aa18.29■□□□□ 0.52
C9orf3-219ENST00000488186 ARHGAP39Q9C0H5 1083 aa18.29■□□□□ 0.52
C9orf3-219ENST00000488186 MROH8Q9H579 483 aa18.29■□□□□ 0.52
C9orf3-219ENST00000488186 RBM28Q9NW13 759 aaKnown RBP18.29■□□□□ 0.52
C9orf3-219ENST00000488186 PNMA2Q9UL42 364 aa18.29■□□□□ 0.52
C9orf3-219ENST00000488186 PTPN22Q9Y2R2 807 aa18.29■□□□□ 0.52
C9orf3-219ENST00000488186 CCDC196A0A1B0GTZ2 297 aa18.28■□□□□ 0.52
C9orf3-219ENST00000488186 ERCC3P19447 782 aa18.28■□□□□ 0.52
C9orf3-219ENST00000488186 PPP2R5BQ15173 497 aa18.28■□□□□ 0.52
C9orf3-219ENST00000488186 RIOX2Q8IUF8 465 aa18.28■□□□□ 0.52
C9orf3-219ENST00000488186 SHCBP1Q8NEM2 672 aa18.28■□□□□ 0.52
C9orf3-219ENST00000488186 REPS2Q8NFH8 660 aa18.28■□□□□ 0.52
C9orf3-219ENST00000488186 IL17RAQ96F46 866 aa18.28■□□□□ 0.52
C9orf3-219ENST00000488186 TRIM47Q96LD4 638 aa18.28■□□□□ 0.52
C9orf3-219ENST00000488186 PORCNQ9H237 461 aa18.28■□□□□ 0.52
C9orf3-219ENST00000488186 RANBP17Q9H2T7 1088 aaKnown RBP18.28■□□□□ 0.52
C9orf3-219ENST00000488186 CCPG1Q9ULG6 757 aa18.28■□□□□ 0.52
C9orf3-219ENST00000488186 A0A0G2JMZ2 1700 aa18.27■□□□□ 0.52
C9orf3-219ENST00000488186 ATP2A1O14983 1001 aa18.27■□□□□ 0.52
C9orf3-219ENST00000488186 ALAS1P13196 640 aa18.27■□□□□ 0.52
C9orf3-219ENST00000488186 CAP1Q01518 475 aa18.27■□□□□ 0.52
C9orf3-219ENST00000488186 TOB2Q14106 344 aaPredicted RBP18.27■□□□□ 0.52
C9orf3-219ENST00000488186 CDC37Q16543 378 aaPredicted RBP18.27■□□□□ 0.52
C9orf3-219ENST00000488186 CCDC82Q8N4S0 544 aa18.27■□□□□ 0.52
C9orf3-219ENST00000488186 AGBL1Q96MI9 1066 aa18.27■□□□□ 0.52
C9orf3-219ENST00000488186 AGXT2Q9BYV1 514 aa18.27■□□□□ 0.52
C9orf3-219ENST00000488186 ALDH8A1Q9H2A2 487 aaPredicted RBP18.27■□□□□ 0.52
C9orf3-219ENST00000488186 HOMER2Q9NSB8 354 aa18.27■□□□□ 0.52
C9orf3-219ENST00000488186 SRRDQ9UH36 339 aa18.27■□□□□ 0.52
C9orf3-219ENST00000488186 ZNF214Q9UL59 606 aaPredicted RBP18.27■□□□□ 0.52
C9orf3-219ENST00000488186 HTTP42858 3142 aa18.27■□□□□ 0.51
C9orf3-219ENST00000488186 ICAM1P05362 532 aa18.26■□□□□ 0.51
C9orf3-219ENST00000488186 RCAN1P53805 252 aa18.26■□□□□ 0.51
C9orf3-219ENST00000488186 TKFCQ3LXA3 575 aa18.26■□□□□ 0.51
C9orf3-219ENST00000488186 GPR142Q7Z601 462 aa18.26■□□□□ 0.51
C9orf3-219ENST00000488186 HOMER1Q86YM7 354 aa18.26■□□□□ 0.51
C9orf3-219ENST00000488186 PIBF1Q8WXW3 757 aa18.26■□□□□ 0.51
C9orf3-219ENST00000488186 RRP36Q96EU6 259 aaKnown RBP18.26■□□□□ 0.51
C9orf3-219ENST00000488186 ABHD8Q96I13 439 aa18.26■□□□□ 0.51
C9orf3-219ENST00000488186 TBC1D32Q96NH3 1257 aa18.26■□□□□ 0.51
C9orf3-219ENST00000488186 LARP6Q9BRS8 491 aaKnown RBP18.26■□□□□ 0.51
C9orf3-219ENST00000488186 JMJD4Q9H9V9 463 aa18.26■□□□□ 0.51
C9orf3-219ENST00000488186 SEC63Q9UGP8 760 aaKnown RBP18.26■□□□□ 0.51
C9orf3-219ENST00000488186 FBXO40Q9UH90 709 aa18.26■□□□□ 0.51
C9orf3-219ENST00000488186 STRNO43815 780 aa18.25■□□□□ 0.51
C9orf3-219ENST00000488186 FCER1AP12319 257 aa18.25■□□□□ 0.51
C9orf3-219ENST00000488186 SMARCA1P28370 1054 aa18.25■□□□□ 0.51
C9orf3-219ENST00000488186 CTGFP29279 349 aa18.25■□□□□ 0.51
C9orf3-219ENST00000488186 AK2P54819 239 aa18.25■□□□□ 0.51
C9orf3-219ENST00000488186 TRAF1Q13077 416 aa18.25■□□□□ 0.51
C9orf3-219ENST00000488186 IRF5Q13568 498 aa18.25■□□□□ 0.51
C9orf3-219ENST00000488186 KCTD2Q14681 263 aa18.25■□□□□ 0.51
C9orf3-219ENST00000488186 RABEP1Q15276 862 aa18.25■□□□□ 0.51
C9orf3-219ENST00000488186 NOL8Q76FK4 1167 aaKnown RBP18.25■□□□□ 0.51
C9orf3-219ENST00000488186 FBXO11Q86XK2 927 aa18.25■□□□□ 0.51
C9orf3-219ENST00000488186 CHST13Q8NET6 341 aa18.25■□□□□ 0.51
C9orf3-219ENST00000488186 RAET1EQ8TD07 263 aa18.25■□□□□ 0.51
C9orf3-219ENST00000488186 ZNF274Q96GC6 653 aaPredicted RBP18.25■□□□□ 0.51
C9orf3-219ENST00000488186 TRERF1Q96PN7 1200 aa18.25■□□□□ 0.51
C9orf3-219ENST00000488186 NUDT12Q9BQG2 462 aa18.25■□□□□ 0.51
C9orf3-219ENST00000488186 ZBTB5O15062 677 aa18.24■□□□□ 0.51
C9orf3-219ENST00000488186 PLEKHA8P1O95397 391 aa18.24■□□□□ 0.51
C9orf3-219ENST00000488186 PDIA3P30101 505 aaKnown RBP18.24■□□□□ 0.51
C9orf3-219ENST00000488186 CCT2P78371 535 aaKnown RBP18.24■□□□□ 0.51
C9orf3-219ENST00000488186 STK3Q13188 491 aa18.24■□□□□ 0.51
C9orf3-219ENST00000488186 QRICH1Q2TAL8 776 aa18.24■□□□□ 0.51
C9orf3-219ENST00000488186 USH1GQ495M9 461 aa18.24■□□□□ 0.51
C9orf3-219ENST00000488186 TMTC3Q6ZXV5 915 aa18.24■□□□□ 0.51
C9orf3-219ENST00000488186 DPP9Q86TI2 863 aa18.24■□□□□ 0.51
C9orf3-219ENST00000488186 CMTR1Q8N1G2 835 aaKnown RBP18.24■□□□□ 0.51
C9orf3-219ENST00000488186 ANKRD35Q8N283 1001 aa18.24■□□□□ 0.51
C9orf3-219ENST00000488186 SRBD1Q8N5C6 995 aaKnown RBP18.24■□□□□ 0.51
C9orf3-219ENST00000488186 SOCS4Q8WXH5 440 aa18.24■□□□□ 0.51
C9orf3-219ENST00000488186 DDX11Q96FC9 970 aa18.24■□□□□ 0.51
C9orf3-219ENST00000488186 PIGSQ96S52 555 aa18.24■□□□□ 0.51
C9orf3-219ENST00000488186 MMP19Q99542 508 aa18.24■□□□□ 0.51
C9orf3-219ENST00000488186 SPZ1Q9BXG8 430 aa18.24■□□□□ 0.51
C9orf3-219ENST00000488186 SLKQ9H2G2 1235 aaPredicted RBP18.24■□□□□ 0.51
C9orf3-219ENST00000488186 RIOX1Q9H6W3 641 aa18.24■□□□□ 0.51
C9orf3-219ENST00000488186 ACAD9Q9H845 621 aa18.24■□□□□ 0.51
C9orf3-219ENST00000488186 RNF146Q9NTX7 359 aa18.24■□□□□ 0.51
C9orf3-219ENST00000488186 SLC5A4Q9NY91 659 aa18.24■□□□□ 0.51
C9orf3-219ENST00000488186 RIPK3Q9Y572 518 aa18.24■□□□□ 0.51
C9orf3-219ENST00000488186 ZSWIM8A7E2V4 1837 aa18.23■□□□□ 0.51
C9orf3-219ENST00000488186 PNMA6FA0A0J9YX94 578 aa18.23■□□□□ 0.51
C9orf3-219ENST00000488186 SLC15A5A6NIM6 579 aa18.23■□□□□ 0.51
C9orf3-219ENST00000488186 CPLX1O14810 134 aa18.23■□□□□ 0.51
C9orf3-219ENST00000488186 ST18O60284 1047 aa18.23■□□□□ 0.51
C9orf3-219ENST00000488186 PTPREP23469 700 aa18.23■□□□□ 0.51
C9orf3-219ENST00000488186 ADD1P35611 737 aaKnown RBP18.23■□□□□ 0.51
C9orf3-219ENST00000488186 EVCP57679 992 aa18.23■□□□□ 0.51
C9orf3-219ENST00000488186 AKAP17AQ02040 695 aaKnown RBP18.23■□□□□ 0.51
C9orf3-219ENST00000488186 CPLX2Q6PUV4 134 aaKnown RBP18.23■□□□□ 0.51
C9orf3-219ENST00000488186 NBPF11Q86T75 865 aa18.23■□□□□ 0.51
C9orf3-219ENST00000488186 AMNQ9BXJ7 453 aa18.23■□□□□ 0.51
C9orf3-219ENST00000488186 HPS5Q9UPZ3 1129 aa18.23■□□□□ 0.51
C9orf3-219ENST00000488186 ZNF536O15090 1300 aa18.23■□□□□ 0.51
C9orf3-219ENST00000488186 COL11A1P12107 1806 aaPredicted RBP18.22■□□□□ 0.51
C9orf3-219ENST00000488186 CYP2B6P20813 491 aa18.22■□□□□ 0.51
C9orf3-219ENST00000488186 RGS2P41220 211 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms