RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 BMP8BP34820 402 aa5.81□□□□□ -1.48
ECHDC1-217ENST00000488087 GRB10Q13322 594 aa5.81□□□□□ -1.48
ECHDC1-217ENST00000488087 DPY19L1Q2PZI1 675 aa5.81□□□□□ -1.48
ECHDC1-217ENST00000488087 SPATC1Q76KD6 591 aa5.81□□□□□ -1.48
ECHDC1-217ENST00000488087 WAPLQ7Z5K2 1190 aa5.81□□□□□ -1.48
ECHDC1-217ENST00000488087 ZNF227Q86WZ6 799 aa5.81□□□□□ -1.48
ECHDC1-217ENST00000488087 ZNF513Q8N8E2 541 aaPredicted RBP5.81□□□□□ -1.48
ECHDC1-217ENST00000488087 LINC00116Q8NCU8 138 aa5.81□□□□□ -1.48
ECHDC1-217ENST00000488087 PI4K2BQ8TCG2 481 aa5.81□□□□□ -1.48
ECHDC1-217ENST00000488087 CDADC1Q9BWV3 514 aa5.81□□□□□ -1.48
ECHDC1-217ENST00000488087 PRDM7Q9NQW5 492 aa5.81□□□□□ -1.48
ECHDC1-217ENST00000488087 SLAMF8Q9P0V8 285 aa5.81□□□□□ -1.48
ECHDC1-217ENST00000488087 GPR55Q9Y2T6 319 aaPredicted RBP5.81□□□□□ -1.48
ECHDC1-217ENST00000488087 EMC9Q9Y3B6 208 aa5.81□□□□□ -1.48
ECHDC1-217ENST00000488087 GSTM1P09488 218 aa5.8□□□□□ -1.48
ECHDC1-217ENST00000488087 FUT4P22083 530 aa5.8□□□□□ -1.48
ECHDC1-217ENST00000488087 TEKQ02763 1124 aa5.8□□□□□ -1.48
ECHDC1-217ENST00000488087 NFXL1Q6ZNB6 911 aa5.8□□□□□ -1.48
ECHDC1-217ENST00000488087 WFDC3Q8IUB2 231 aa5.8□□□□□ -1.48
ECHDC1-217ENST00000488087 LRRC47Q8N1G4 583 aaKnown RBP5.8□□□□□ -1.48
ECHDC1-217ENST00000488087 NAT16Q8N8M0 369 aa5.8□□□□□ -1.48
ECHDC1-217ENST00000488087 ZNF669Q96BR6 464 aaPredicted RBP5.8□□□□□ -1.48
ECHDC1-217ENST00000488087 ALPK1Q96QP1 1244 aa5.8□□□□□ -1.48
ECHDC1-217ENST00000488087 DNAJC7Q99615 494 aa5.8□□□□□ -1.48
ECHDC1-217ENST00000488087 PIF1Q9H611 641 aa5.8□□□□□ -1.48
ECHDC1-217ENST00000488087 ZMYM5Q9UJ78 669 aa5.8□□□□□ -1.48
ECHDC1-217ENST00000488087 KDM2BQ8NHM5 1336 aa5.79□□□□□ -1.48
ECHDC1-217ENST00000488087 STXBP3O00186 592 aa5.79□□□□□ -1.48
ECHDC1-217ENST00000488087 TBX1O43435 398 aa5.79□□□□□ -1.48
ECHDC1-217ENST00000488087 ZNF205O95201 554 aa5.79□□□□□ -1.48
ECHDC1-217ENST00000488087 ENDOUP21128 410 aaKnown RBP5.79□□□□□ -1.48
ECHDC1-217ENST00000488087 GTF2IRD2BQ6EKJ0 949 aa5.79□□□□□ -1.48
ECHDC1-217ENST00000488087 SLC23A3Q6PIS1 610 aa5.79□□□□□ -1.48
ECHDC1-217ENST00000488087 GTF2IRD2Q86UP8 949 aa5.79□□□□□ -1.48
ECHDC1-217ENST00000488087 TRIM59Q8IWR1 403 aa5.79□□□□□ -1.48
ECHDC1-217ENST00000488087 SGSM3Q96HU1 749 aa5.79□□□□□ -1.48
ECHDC1-217ENST00000488087 SLC12A9Q9BXP2 914 aa5.79□□□□□ -1.48
ECHDC1-217ENST00000488087 AP5S1Q9NUS5 200 aa5.79□□□□□ -1.48
ECHDC1-217ENST00000488087 DNAJC25-GNG10A0A024R161 153 aa5.78□□□□□ -1.48
ECHDC1-217ENST00000488087 A0A1W2PQU0 124 aa5.78□□□□□ -1.48
ECHDC1-217ENST00000488087 DIAPH1O60610 1272 aaKnown RBP5.78□□□□□ -1.48
ECHDC1-217ENST00000488087 IFNGR1P15260 489 aa5.78□□□□□ -1.48
ECHDC1-217ENST00000488087 KCNJ6P48051 423 aa5.78□□□□□ -1.48
ECHDC1-217ENST00000488087 SEPHS1P49903 392 aa5.78□□□□□ -1.48
ECHDC1-217ENST00000488087 GP2P55259 537 aaKnown RBP5.78□□□□□ -1.48
ECHDC1-217ENST00000488087 PPP2R2AP63151 447 aa5.78□□□□□ -1.48
ECHDC1-217ENST00000488087 HSP90AA2PQ14568 343 aaPredicted RBP5.78□□□□□ -1.48
ECHDC1-217ENST00000488087 ZPBP2Q6X784 338 aa5.78□□□□□ -1.48
ECHDC1-217ENST00000488087 BTN2A2Q8WVV5 523 aa5.78□□□□□ -1.48
ECHDC1-217ENST00000488087 MRGPRX3Q96LB0 322 aa5.78□□□□□ -1.48
ECHDC1-217ENST00000488087 FCRL3Q96P31 734 aaPredicted RBP5.78□□□□□ -1.48
ECHDC1-217ENST00000488087 SPATA9Q9BWV2 254 aa5.78□□□□□ -1.48
ECHDC1-217ENST00000488087 ADAMTS10Q9H324 1103 aa5.78□□□□□ -1.48
ECHDC1-217ENST00000488087 BACE2Q9Y5Z0 518 aa5.78□□□□□ -1.48
ECHDC1-217ENST00000488087 C2orf71A6NGG8 1288 aa5.77□□□□□ -1.49
ECHDC1-217ENST00000488087 SNRPB2P08579 225 aaKnown RBP5.77□□□□□ -1.49
ECHDC1-217ENST00000488087 HK2P52789 917 aa5.77□□□□□ -1.49
ECHDC1-217ENST00000488087 SCRN1Q12765 414 aa5.77□□□□□ -1.49
ECHDC1-217ENST00000488087 DUSP4Q13115 394 aa5.77□□□□□ -1.49
ECHDC1-217ENST00000488087 ZNF792Q3KQV3 632 aa5.77□□□□□ -1.49
ECHDC1-217ENST00000488087 RALGPS1Q5JS13 557 aa5.77□□□□□ -1.49
ECHDC1-217ENST00000488087 RTP2Q5QGT7 225 aa5.77□□□□□ -1.49
ECHDC1-217ENST00000488087 KSR1Q8IVT5 923 aa5.77□□□□□ -1.49
ECHDC1-217ENST00000488087 CCDC120Q96HB5 630 aa5.77□□□□□ -1.49
ECHDC1-217ENST00000488087 FMNL2Q96PY5 1086 aa5.77□□□□□ -1.49
ECHDC1-217ENST00000488087 AARSD1Q9BTE6 412 aaKnown RBP5.77□□□□□ -1.49
ECHDC1-217ENST00000488087 NKX2-4Q9H2Z4 354 aa5.77□□□□□ -1.49
ECHDC1-217ENST00000488087 TMEM59LQ9UK28 342 aa5.77□□□□□ -1.49
ECHDC1-217ENST00000488087 TRAV20A0A0B4J274 112 aa5.76□□□□□ -1.49
ECHDC1-217ENST00000488087 TMEM82A0PJX8 343 aa5.76□□□□□ -1.49
ECHDC1-217ENST00000488087 AURKAO14965 403 aa5.76□□□□□ -1.49
ECHDC1-217ENST00000488087 RNASE1P07998 156 aaKnown RBP5.76□□□□□ -1.49
ECHDC1-217ENST00000488087 ECI1P42126 302 aa5.76□□□□□ -1.49
ECHDC1-217ENST00000488087 FZD5Q13467 585 aa5.76□□□□□ -1.49
ECHDC1-217ENST00000488087 ABI1Q8IZP0 508 aa5.76□□□□□ -1.49
ECHDC1-217ENST00000488087 IPO9Q96P70 1041 aaKnown RBP5.76□□□□□ -1.49
ECHDC1-217ENST00000488087 CDC6Q99741 560 aa5.76□□□□□ -1.49
ECHDC1-217ENST00000488087 MCMBPQ9BTE3 642 aa5.76□□□□□ -1.49
ECHDC1-217ENST00000488087 IER2Q9BTL4 223 aa5.76□□□□□ -1.49
ECHDC1-217ENST00000488087 RC3H2Q9HBD1 1191 aaKnown RBP5.76□□□□□ -1.49
ECHDC1-217ENST00000488087 CYP26B1Q9NR63 512 aa5.76□□□□□ -1.49
ECHDC1-217ENST00000488087 ARHGEF4Q9NR80 690 aa5.76□□□□□ -1.49
ECHDC1-217ENST00000488087 MBNL3Q9NUK0 354 aaKnown RBP5.76□□□□□ -1.49
ECHDC1-217ENST00000488087 ADAMTS6Q9UKP5 1117 aa5.76□□□□□ -1.49
ECHDC1-217ENST00000488087 ZGLP1P0C6A0 271 aa5.75□□□□□ -1.49
ECHDC1-217ENST00000488087 HOXC12P31275 282 aa5.75□□□□□ -1.49
ECHDC1-217ENST00000488087 GRIA2P42262 883 aa5.75□□□□□ -1.49
ECHDC1-217ENST00000488087 SF1Q15637 639 aaKnown RBP5.75□□□□□ -1.49
ECHDC1-217ENST00000488087 EEF1DP3Q658K8 133 aa5.75□□□□□ -1.49
ECHDC1-217ENST00000488087 NOP9Q86U38 636 aaKnown RBP5.75□□□□□ -1.49
ECHDC1-217ENST00000488087 LILRB2Q8N423 598 aa5.75□□□□□ -1.49
ECHDC1-217ENST00000488087 THAP3Q8WTV1 239 aaPredicted RBP5.75□□□□□ -1.49
ECHDC1-217ENST00000488087 FCRL2Q96LA5 508 aaPredicted RBP5.75□□□□□ -1.49
ECHDC1-217ENST00000488087 CCDC140Q96MF4 163 aa5.75□□□□□ -1.49
ECHDC1-217ENST00000488087 ERVK13-1Q9NX77 482 aa5.75□□□□□ -1.49
ECHDC1-217ENST00000488087 FGF10O15520 208 aaPredicted RBP5.74□□□□□ -1.49
ECHDC1-217ENST00000488087 PRODHO43272 600 aa5.74□□□□□ -1.49
ECHDC1-217ENST00000488087 USP2O75604 605 aaPredicted RBP5.74□□□□□ -1.49
ECHDC1-217ENST00000488087 TBC1D8O95759 1140 aa5.74□□□□□ -1.49
ECHDC1-217ENST00000488087 CPP00450 1065 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms