RNA–Protein interactions for RNA: ENST00000488035.5

R3HDM1-219, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-219ENST00000488035 APOBRQ0VD83 1088 aa4.62□□□□□ -1.67
R3HDM1-219ENST00000488035 NMIQ13287 307 aaPredicted RBP4.62□□□□□ -1.67
R3HDM1-219ENST00000488035 SEZ6Q53EL9 994 aa4.62□□□□□ -1.67
R3HDM1-219ENST00000488035 UBXN11Q5T124 520 aa4.62□□□□□ -1.67
R3HDM1-219ENST00000488035 GALNT18Q6P9A2 607 aa4.62□□□□□ -1.67
R3HDM1-219ENST00000488035 TMC6Q7Z403 805 aa4.62□□□□□ -1.67
R3HDM1-219ENST00000488035 REC114Q7Z4M0 266 aa4.62□□□□□ -1.67
R3HDM1-219ENST00000488035 DAGLBQ8NCG7 672 aa4.62□□□□□ -1.67
R3HDM1-219ENST00000488035 RASGRP4Q8TDF6 673 aa4.62□□□□□ -1.67
R3HDM1-219ENST00000488035 CCDC74BQ96LY2 380 aa4.62□□□□□ -1.67
R3HDM1-219ENST00000488035 LRRC3Q9BY71 257 aa4.62□□□□□ -1.67
R3HDM1-219ENST00000488035 GINM1Q9NU53 330 aa4.62□□□□□ -1.67
R3HDM1-219ENST00000488035 CORINQ9Y5Q5 1042 aa4.62□□□□□ -1.67
R3HDM1-219ENST00000488035 WTIPA6NIX2 430 aaPredicted RBP4.61□□□□□ -1.67
R3HDM1-219ENST00000488035 OVOL3O00110 214 aa4.61□□□□□ -1.67
R3HDM1-219ENST00000488035 PRICKLE3O43900 615 aaPredicted RBP4.61□□□□□ -1.67
R3HDM1-219ENST00000488035 EFEMP2O95967 443 aa4.61□□□□□ -1.67
R3HDM1-219ENST00000488035 SDHBP21912 280 aa4.61□□□□□ -1.67
R3HDM1-219ENST00000488035 DNAJA1P31689 397 aaKnown RBP4.61□□□□□ -1.67
R3HDM1-219ENST00000488035 SLURP1P55000 103 aa4.61□□□□□ -1.67
R3HDM1-219ENST00000488035 MPP2Q14168 576 aa4.61□□□□□ -1.67
R3HDM1-219ENST00000488035 RAB3GAP1Q15042 981 aa4.61□□□□□ -1.67
R3HDM1-219ENST00000488035 CCDC84Q86UT8 332 aaPredicted RBP4.61□□□□□ -1.67
R3HDM1-219ENST00000488035 USHBP1Q8N6Y0 703 aa4.61□□□□□ -1.67
R3HDM1-219ENST00000488035 ZNF655Q8N720 491 aaPredicted RBP4.61□□□□□ -1.67
R3HDM1-219ENST00000488035 TP53I13Q8NBR0 393 aaPredicted RBP4.61□□□□□ -1.67
R3HDM1-219ENST00000488035 LINC00116Q8NCU8 138 aa4.61□□□□□ -1.67
R3HDM1-219ENST00000488035 HHIPL1Q96JK4 782 aa4.61□□□□□ -1.67
R3HDM1-219ENST00000488035 BRMS1Q9HCU9 246 aa4.61□□□□□ -1.67
R3HDM1-219ENST00000488035 USP40Q9NVE5 1235 aa4.61□□□□□ -1.67
R3HDM1-219ENST00000488035 KLHL14Q9P2G3 628 aa4.61□□□□□ -1.67
R3HDM1-219ENST00000488035 TNFRSF10DQ9UBN6 386 aa4.61□□□□□ -1.67
R3HDM1-219ENST00000488035 TCFL5Q9UL49 500 aa4.61□□□□□ -1.67
R3HDM1-219ENST00000488035 EFR3BQ9Y2G0 817 aa4.61□□□□□ -1.67
R3HDM1-219ENST00000488035 PCDHA5Q9Y5H7 936 aa4.61□□□□□ -1.67
R3HDM1-219ENST00000488035 TAF6LQ9Y6J9 622 aa4.61□□□□□ -1.67
R3HDM1-219ENST00000488035 BUB1BO60566 1050 aaPredicted RBP4.6□□□□□ -1.67
R3HDM1-219ENST00000488035 IGSF3O75054 1194 aa4.6□□□□□ -1.67
R3HDM1-219ENST00000488035 BPNT1O95861 308 aa4.6□□□□□ -1.67
R3HDM1-219ENST00000488035 FGRP09769 529 aa4.6□□□□□ -1.67
R3HDM1-219ENST00000488035 PFKLP17858 780 aa4.6□□□□□ -1.67
R3HDM1-219ENST00000488035 ATF4P18848 351 aaPredicted RBP4.6□□□□□ -1.67
R3HDM1-219ENST00000488035 ENDOUP21128 410 aaKnown RBP4.6□□□□□ -1.67
R3HDM1-219ENST00000488035 MAGEA10P43363 369 aaPredicted RBP4.6□□□□□ -1.67
R3HDM1-219ENST00000488035 NASPP49321 788 aaPredicted RBP4.6□□□□□ -1.67
R3HDM1-219ENST00000488035 RNF4P78317 190 aa4.6□□□□□ -1.67
R3HDM1-219ENST00000488035 ZXDAP98168 799 aa4.6□□□□□ -1.67
R3HDM1-219ENST00000488035 CLCQ05315 142 aa4.6□□□□□ -1.67
R3HDM1-219ENST00000488035 CCDC81Q6ZN84 652 aa4.6□□□□□ -1.67
R3HDM1-219ENST00000488035 MCF2L2Q86YR7 1114 aa4.6□□□□□ -1.67
R3HDM1-219ENST00000488035 SLITRK4Q8IW52 837 aa4.6□□□□□ -1.67
R3HDM1-219ENST00000488035 NKD1Q969G9 470 aa4.6□□□□□ -1.67
R3HDM1-219ENST00000488035 HDAC8Q9BY41 377 aa4.6□□□□□ -1.67
R3HDM1-219ENST00000488035 FOXP3Q9BZS1 431 aa4.6□□□□□ -1.67
R3HDM1-219ENST00000488035 SRRDQ9UH36 339 aa4.6□□□□□ -1.67
R3HDM1-219ENST00000488035 PPT2Q9UMR5 302 aa4.6□□□□□ -1.67
R3HDM1-219ENST00000488035 TMEM82A0PJX8 343 aa4.59□□□□□ -1.67
R3HDM1-219ENST00000488035 FFAR3O14843 346 aa4.59□□□□□ -1.67
R3HDM1-219ENST00000488035 DNAJA2O60884 412 aa4.59□□□□□ -1.67
R3HDM1-219ENST00000488035 SOX9P48436 509 aa4.59□□□□□ -1.67
R3HDM1-219ENST00000488035 CBX2Q14781 532 aaPredicted RBP4.59□□□□□ -1.67
R3HDM1-219ENST00000488035 CWF19L2Q2TBE0 894 aaKnown RBP4.59□□□□□ -1.67
R3HDM1-219ENST00000488035 GK5Q6ZS86 529 aa4.59□□□□□ -1.67
R3HDM1-219ENST00000488035 SLC43A3Q8NBI5 491 aa4.59□□□□□ -1.67
R3HDM1-219ENST00000488035 VWCEQ96DN2 955 aa4.59□□□□□ -1.67
R3HDM1-219ENST00000488035 TCTN2Q96GX1 697 aa4.59□□□□□ -1.67
R3HDM1-219ENST00000488035 FCRL2Q96LA5 508 aaPredicted RBP4.59□□□□□ -1.67
R3HDM1-219ENST00000488035 GMLQ99445 158 aa4.59□□□□□ -1.67
R3HDM1-219ENST00000488035 PLCD4Q9BRC7 762 aa4.59□□□□□ -1.67
R3HDM1-219ENST00000488035 ANTXR1Q9H6X2 564 aa4.59□□□□□ -1.67
R3HDM1-219ENST00000488035 PCDHB14Q9Y5E9 798 aa4.59□□□□□ -1.67
R3HDM1-219ENST00000488035 SYPP08247 313 aa4.58□□□□□ -1.68
R3HDM1-219ENST00000488035 MCM4P33991 863 aa4.58□□□□□ -1.68
R3HDM1-219ENST00000488035 CYP4F8P98187 520 aa4.58□□□□□ -1.68
R3HDM1-219ENST00000488035 TARBP2Q15633 366 aaKnown RBP4.58□□□□□ -1.68
R3HDM1-219ENST00000488035 PHACTR4Q8IZ21 702 aa4.58□□□□□ -1.68
R3HDM1-219ENST00000488035 ROBO2Q9HCK4 1378 aa4.57□□□□□ -1.68
R3HDM1-219ENST00000488035 PRR36Q9H6K5 1346 aa4.57□□□□□ -1.68
R3HDM1-219ENST00000488035 FADS2P1A8MWK0 482 aa4.57□□□□□ -1.68
R3HDM1-219ENST00000488035 HTR3BO95264 441 aa4.57□□□□□ -1.68
R3HDM1-219ENST00000488035 GBP1P32455 592 aa4.57□□□□□ -1.68
R3HDM1-219ENST00000488035 ARID5AQ03989 594 aa4.57□□□□□ -1.68
R3HDM1-219ENST00000488035 GNL2Q13823 731 aaKnown RBP4.57□□□□□ -1.68
R3HDM1-219ENST00000488035 HSF5Q4G112 596 aaPredicted RBP4.57□□□□□ -1.68
R3HDM1-219ENST00000488035 SREK1Q8WXA9 508 aaKnown RBP4.57□□□□□ -1.68
R3HDM1-219ENST00000488035 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.57□□□□□ -1.68
R3HDM1-219ENST00000488035 TANGO6Q9C0B7 1094 aa4.57□□□□□ -1.68
R3HDM1-219ENST00000488035 MRVI1Q9Y6F6 885 aa4.57□□□□□ -1.68
R3HDM1-219ENST00000488035 IRS2Q9Y4H2 1338 aa4.56□□□□□ -1.68
R3HDM1-219ENST00000488035 A0A1W2PQ45 241 aaPredicted RBP4.56□□□□□ -1.68
R3HDM1-219ENST00000488035 A0A1W2PQY0 241 aa4.56□□□□□ -1.68
R3HDM1-219ENST00000488035 NUDT19A8MXV4 375 aa4.56□□□□□ -1.68
R3HDM1-219ENST00000488035 C1QTNF3-AMACRE9PGA6 284 aa4.56□□□□□ -1.68
R3HDM1-219ENST00000488035 FKTNO75072 461 aa4.56□□□□□ -1.68
R3HDM1-219ENST00000488035 PRKCAP17252 672 aa4.56□□□□□ -1.68
R3HDM1-219ENST00000488035 IGFBP6P24592 240 aaPredicted RBP4.56□□□□□ -1.68
R3HDM1-219ENST00000488035 NCKAP1LP55160 1127 aa4.56□□□□□ -1.68
R3HDM1-219ENST00000488035 NR1I3Q14994 352 aa4.56□□□□□ -1.68
R3HDM1-219ENST00000488035 NT5DC1Q5TFE4 455 aa4.56□□□□□ -1.68
R3HDM1-219ENST00000488035 ZC3H14Q6PJT7 736 aaKnown RBP4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms