RNA–Protein interactions for RNA: ENST00000487711.5

TTC3-220, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-220ENST00000487711 VAMP4O75379 141 aa6.3□□□□□ -1.4
TTC3-220ENST00000487711 USP2O75604 605 aaPredicted RBP6.3□□□□□ -1.4
TTC3-220ENST00000487711 HPXP02790 462 aa6.3□□□□□ -1.4
TTC3-220ENST00000487711 IFNGR1P15260 489 aa6.3□□□□□ -1.4
TTC3-220ENST00000487711 GRB10Q13322 594 aa6.3□□□□□ -1.4
TTC3-220ENST00000487711 SLC14A2Q15849 920 aa6.3□□□□□ -1.4
TTC3-220ENST00000487711 RTP2Q5QGT7 225 aa6.3□□□□□ -1.4
TTC3-220ENST00000487711 FYB2Q5VWT5 728 aa6.3□□□□□ -1.4
TTC3-220ENST00000487711 ZNF513Q8N8E2 541 aaPredicted RBP6.3□□□□□ -1.4
TTC3-220ENST00000487711 ANKS4BQ8N8V4 417 aa6.3□□□□□ -1.4
TTC3-220ENST00000487711 KIRREL1Q96J84 757 aa6.3□□□□□ -1.4
TTC3-220ENST00000487711 HHIPL1Q96JK4 782 aa6.3□□□□□ -1.4
TTC3-220ENST00000487711 FCRL3Q96P31 734 aaPredicted RBP6.3□□□□□ -1.4
TTC3-220ENST00000487711 G6PC3Q9BUM1 346 aa6.3□□□□□ -1.4
TTC3-220ENST00000487711 C19orf44Q9H6X5 657 aa6.3□□□□□ -1.4
TTC3-220ENST00000487711 EBF1Q9UH73 591 aa6.3□□□□□ -1.4
TTC3-220ENST00000487711 EMC9Q9Y3B6 208 aa6.3□□□□□ -1.4
TTC3-220ENST00000487711 CCDC85CA6NKD9 419 aa6.29□□□□□ -1.4
TTC3-220ENST00000487711 AGRPO00253 132 aa6.29□□□□□ -1.4
TTC3-220ENST00000487711 TRHRP34981 398 aaPredicted RBP6.29□□□□□ -1.4
TTC3-220ENST00000487711 KIR2DL1P43626 348 aaPredicted RBP6.29□□□□□ -1.4
TTC3-220ENST00000487711 KIR2DL2P43627 348 aaPredicted RBP6.29□□□□□ -1.4
TTC3-220ENST00000487711 RBL2Q08999 1139 aa6.29□□□□□ -1.4
TTC3-220ENST00000487711 KCNMB1Q16558 191 aa6.29□□□□□ -1.4
TTC3-220ENST00000487711 CEP128Q6ZU80 1094 aa6.29□□□□□ -1.4
TTC3-220ENST00000487711 ZSWIM9Q86XI8 627 aa6.29□□□□□ -1.4
TTC3-220ENST00000487711 ABHD4Q8TB40 342 aa6.29□□□□□ -1.4
TTC3-220ENST00000487711 PMFBP1Q8TBY8 1022 aa6.29□□□□□ -1.4
TTC3-220ENST00000487711 FAM168AQ92567 244 aa6.29□□□□□ -1.4
TTC3-220ENST00000487711 DRC1Q96MC2 740 aa6.29□□□□□ -1.4
TTC3-220ENST00000487711 DNAJC2Q99543 621 aaKnown RBP6.29□□□□□ -1.4
TTC3-220ENST00000487711 LGR4Q9BXB1 951 aa6.29□□□□□ -1.4
TTC3-220ENST00000487711 EPN3Q9H201 632 aa6.29□□□□□ -1.4
TTC3-220ENST00000487711 ERVK13-1Q9NX77 482 aa6.29□□□□□ -1.4
TTC3-220ENST00000487711 GPR55Q9Y2T6 319 aaPredicted RBP6.29□□□□□ -1.4
TTC3-220ENST00000487711 ITGAVP06756 1048 aa6.28□□□□□ -1.4
TTC3-220ENST00000487711 RTP1P59025 263 aa6.28□□□□□ -1.4
TTC3-220ENST00000487711 SLC10A6Q3KNW5 377 aa6.28□□□□□ -1.4
TTC3-220ENST00000487711 TMEM67Q5HYA8 995 aa6.28□□□□□ -1.4
TTC3-220ENST00000487711 SOGA3Q5TF21 947 aa6.28□□□□□ -1.4
TTC3-220ENST00000487711 TRIM59Q8IWR1 403 aa6.28□□□□□ -1.4
TTC3-220ENST00000487711 LILRA2Q8N149 483 aa6.28□□□□□ -1.4
TTC3-220ENST00000487711 ASIC4Q96FT7 647 aa6.28□□□□□ -1.4
TTC3-220ENST00000487711 MCMBPQ9BTE3 642 aa6.28□□□□□ -1.4
TTC3-220ENST00000487711 SIRPGQ9P1W8 387 aa6.28□□□□□ -1.4
TTC3-220ENST00000487711 TNFRSF10DQ9UBN6 386 aa6.28□□□□□ -1.4
TTC3-220ENST00000487711 GPR160Q9UJ42 338 aa6.28□□□□□ -1.4
TTC3-220ENST00000487711 C2orf71A6NGG8 1288 aa6.27□□□□□ -1.41
TTC3-220ENST00000487711 AURKAO14965 403 aa6.27□□□□□ -1.41
TTC3-220ENST00000487711 FGF10O15520 208 aaPredicted RBP6.27□□□□□ -1.41
TTC3-220ENST00000487711 SEPHS1P49903 392 aa6.27□□□□□ -1.41
TTC3-220ENST00000487711 NR0B2Q15466 257 aa6.27□□□□□ -1.41
TTC3-220ENST00000487711 TIGD5Q53EQ6 642 aa6.27□□□□□ -1.41
TTC3-220ENST00000487711 EEF1DP3Q658K8 133 aa6.27□□□□□ -1.41
TTC3-220ENST00000487711 GTF2IRD2BQ6EKJ0 949 aa6.27□□□□□ -1.41
TTC3-220ENST00000487711 CYP2R1Q6VVX0 501 aa6.27□□□□□ -1.41
TTC3-220ENST00000487711 GTF2IRD2Q86UP8 949 aa6.27□□□□□ -1.41
TTC3-220ENST00000487711 ZNF227Q86WZ6 799 aa6.27□□□□□ -1.41
TTC3-220ENST00000487711 KSR1Q8IVT5 923 aa6.27□□□□□ -1.41
TTC3-220ENST00000487711 BACE2Q9Y5Z0 518 aa6.27□□□□□ -1.41
TTC3-220ENST00000487711 FADS2P1A8MWK0 482 aa6.26□□□□□ -1.41
TTC3-220ENST00000487711 TBX1O43435 398 aa6.26□□□□□ -1.41
TTC3-220ENST00000487711 TBC1D8O95759 1140 aa6.26□□□□□ -1.41
TTC3-220ENST00000487711 GLI1P08151 1106 aa6.26□□□□□ -1.41
TTC3-220ENST00000487711 RCSD1Q6JBY9 416 aa6.26□□□□□ -1.41
TTC3-220ENST00000487711 JAMLQ86YT9 394 aa6.26□□□□□ -1.41
TTC3-220ENST00000487711 BTN2A2Q8WVV5 523 aa6.26□□□□□ -1.41
TTC3-220ENST00000487711 MRGPRX3Q96LB0 322 aa6.26□□□□□ -1.41
TTC3-220ENST00000487711 PTCHD1Q96NR3 888 aa6.26□□□□□ -1.41
TTC3-220ENST00000487711 SP110Q9HB58 689 aa6.26□□□□□ -1.41
TTC3-220ENST00000487711 TAF6LQ9Y6J9 622 aa6.26□□□□□ -1.41
TTC3-220ENST00000487711 IQCA1LA6NCM1 817 aa6.25□□□□□ -1.41
TTC3-220ENST00000487711 PDPK1O15530 556 aa6.25□□□□□ -1.41
TTC3-220ENST00000487711 NRDCO43847 1150 aa6.25□□□□□ -1.41
TTC3-220ENST00000487711 PSPNO60542 156 aa6.25□□□□□ -1.41
TTC3-220ENST00000487711 RANGAP1P46060 587 aaPredicted RBP6.25□□□□□ -1.41
TTC3-220ENST00000487711 SCRN1Q12765 414 aa6.25□□□□□ -1.41
TTC3-220ENST00000487711 HLA-DQA1Q5Y7H0 255 aa6.25□□□□□ -1.41
TTC3-220ENST00000487711 GALNT18Q6P9A2 607 aa6.25□□□□□ -1.41
TTC3-220ENST00000487711 MPZL3Q6UWV2 235 aa6.25□□□□□ -1.41
TTC3-220ENST00000487711 TMEM52Q8NDY8 209 aa6.25□□□□□ -1.41
TTC3-220ENST00000487711 ST13P5Q8NFI4 369 aaPredicted RBP6.25□□□□□ -1.41
TTC3-220ENST00000487711 RNF32Q9H0A6 362 aa6.25□□□□□ -1.41
TTC3-220ENST00000487711 CCDC113Q9H0I3 377 aa6.25□□□□□ -1.41
TTC3-220ENST00000487711 NKX2-4Q9H2Z4 354 aa6.25□□□□□ -1.41
TTC3-220ENST00000487711 MSRB2Q9Y3D2 182 aa6.25□□□□□ -1.41
TTC3-220ENST00000487711 CARMIL2Q6F5E8 1435 aa6.25□□□□□ -1.41
TTC3-220ENST00000487711 A0A1W2PQ27 194 aa6.24□□□□□ -1.41
TTC3-220ENST00000487711 A0A1W2PQ45 241 aaPredicted RBP6.24□□□□□ -1.41
TTC3-220ENST00000487711 A0A1W2PQ64 194 aa6.24□□□□□ -1.41
TTC3-220ENST00000487711 A0A1W2PQC6 194 aa6.24□□□□□ -1.41
TTC3-220ENST00000487711 A0A1W2PQD8 194 aa6.24□□□□□ -1.41
TTC3-220ENST00000487711 A0A1W2PQY0 241 aa6.24□□□□□ -1.41
TTC3-220ENST00000487711 WTIPA6NIX2 430 aaPredicted RBP6.24□□□□□ -1.41
TTC3-220ENST00000487711 NOTOA8MTQ0 251 aa6.24□□□□□ -1.41
TTC3-220ENST00000487711 SNRPB2P08579 225 aaKnown RBP6.24□□□□□ -1.41
TTC3-220ENST00000487711 GALK1P51570 392 aa6.24□□□□□ -1.41
TTC3-220ENST00000487711 SERINC3Q13530 473 aa6.24□□□□□ -1.41
TTC3-220ENST00000487711 SNX17Q15036 470 aa6.24□□□□□ -1.41
TTC3-220ENST00000487711 MTERF2Q49AM1 385 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms