RNA–Protein interactions for RNA: ENST00000487558.1

CUL3-211, Transcript of cullin 3, humanhuman

TSL 2

Gene CUL3, Length 1,093 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-211ENST00000487558 PPP2R2AP63151 447 aa8.17□□□□□ -1.1
CUL3-211ENST00000487558 AOC3Q16853 763 aa8.17□□□□□ -1.1
CUL3-211ENST00000487558 POMZP3Q6PJE2 187 aa8.17□□□□□ -1.1
CUL3-211ENST00000487558 FAM214BQ7L5A3 538 aa8.17□□□□□ -1.1
CUL3-211ENST00000487558 PI4K2BQ8TCG2 481 aa8.17□□□□□ -1.1
CUL3-211ENST00000487558 RCC1LQ96I51 464 aaKnown RBP8.17□□□□□ -1.1
CUL3-211ENST00000487558 COX4I2Q96KJ9 171 aa8.17□□□□□ -1.1
CUL3-211ENST00000487558 GP6Q9HCN6 339 aa8.17□□□□□ -1.1
CUL3-211ENST00000487558 ARHGEF4Q9NR80 690 aa8.17□□□□□ -1.1
CUL3-211ENST00000487558 APEX2Q9UBZ4 518 aa8.17□□□□□ -1.1
CUL3-211ENST00000487558 TPX2Q9ULW0 747 aaKnown RBP8.17□□□□□ -1.1
CUL3-211ENST00000487558 AKT3Q9Y243 479 aa8.17□□□□□ -1.1
CUL3-211ENST00000487558 CD2APQ9Y5K6 639 aa8.17□□□□□ -1.1
CUL3-211ENST00000487558 COL4A3BPQ9Y5P4 624 aa8.17□□□□□ -1.1
CUL3-211ENST00000487558 MASP1P48740 699 aa8.16□□□□□ -1.1
CUL3-211ENST00000487558 NBPF9Q3BBW0 867 aa8.16□□□□□ -1.1
CUL3-211ENST00000487558 DALRD3Q5D0E6 543 aaKnown RBP8.16□□□□□ -1.1
CUL3-211ENST00000487558 ZNF227Q86WZ6 799 aa8.16□□□□□ -1.1
CUL3-211ENST00000487558 ZNF513Q8N8E2 541 aaPredicted RBP8.16□□□□□ -1.1
CUL3-211ENST00000487558 FAM168AQ92567 244 aa8.16□□□□□ -1.1
CUL3-211ENST00000487558 HRASLS5Q96KN8 279 aa8.16□□□□□ -1.1
CUL3-211ENST00000487558 HEXIM2Q96MH2 286 aaKnown RBP8.16□□□□□ -1.1
CUL3-211ENST00000487558 DIS3Q9Y2L1 958 aaKnown RBP8.16□□□□□ -1.1
CUL3-211ENST00000487558 TRBV23-1A0A0A0MS06 115 aa8.15□□□□□ -1.1
CUL3-211ENST00000487558 RFPL3O75679 317 aa8.15□□□□□ -1.1
CUL3-211ENST00000487558 FGFR1P11362 822 aa8.15□□□□□ -1.1
CUL3-211ENST00000487558 L1CAMP32004 1257 aa8.15□□□□□ -1.1
CUL3-211ENST00000487558 ZNF124Q15973 351 aa8.15□□□□□ -1.1
CUL3-211ENST00000487558 ARHGEF39Q8N4T4 335 aa8.15□□□□□ -1.1
CUL3-211ENST00000487558 TOP6BLQ8N6T0 577 aa8.15□□□□□ -1.1
CUL3-211ENST00000487558 NINJ1Q92982 152 aa8.15□□□□□ -1.1
CUL3-211ENST00000487558 KISS1RQ969F8 398 aaPredicted RBP8.15□□□□□ -1.1
CUL3-211ENST00000487558 PCDH12Q9NPG4 1184 aa8.15□□□□□ -1.1
CUL3-211ENST00000487558 PRR13Q9NZ81 148 aa8.15□□□□□ -1.1
CUL3-211ENST00000487558 MRPS23Q9Y3D9 190 aaKnown RBP8.15□□□□□ -1.1
CUL3-211ENST00000487558 SHOXO15266 292 aa8.14□□□□□ -1.11
CUL3-211ENST00000487558 FARP2O94887 1054 aaPredicted RBP8.14□□□□□ -1.11
CUL3-211ENST00000487558 FAM209AQ5JX71 171 aa8.14□□□□□ -1.11
CUL3-211ENST00000487558 FOXB2Q5VYV0 432 aa8.14□□□□□ -1.11
CUL3-211ENST00000487558 NSMFQ6X4W1 530 aa8.14□□□□□ -1.11
CUL3-211ENST00000487558 EXOC2Q96KP1 924 aa8.14□□□□□ -1.11
CUL3-211ENST00000487558 KCNH3Q9ULD8 1083 aa8.14□□□□□ -1.11
CUL3-211ENST00000487558 EMC9Q9Y3B6 208 aa8.14□□□□□ -1.11
CUL3-211ENST00000487558 SNX11Q9Y5W9 270 aa8.14□□□□□ -1.11
CUL3-211ENST00000487558 FHOD1Q9Y613 1164 aa8.14□□□□□ -1.11
CUL3-211ENST00000487558 DNAJC25-GNG10A0A024R161 153 aa8.13□□□□□ -1.11
CUL3-211ENST00000487558 PLD2O14939 933 aa8.13□□□□□ -1.11
CUL3-211ENST00000487558 PRODHO43272 600 aa8.13□□□□□ -1.11
CUL3-211ENST00000487558 EOMESO95936 686 aa8.13□□□□□ -1.11
CUL3-211ENST00000487558 PABPC1P11940 636 aaKnown RBP8.13□□□□□ -1.11
CUL3-211ENST00000487558 ZNF445P59923 1031 aa8.13□□□□□ -1.11
CUL3-211ENST00000487558 SUMO1P63165 101 aaKnown RBP8.13□□□□□ -1.11
CUL3-211ENST00000487558 FNDC3BQ53EP0 1204 aaKnown RBP8.13□□□□□ -1.11
CUL3-211ENST00000487558 ANGEL2Q5VTE6 544 aaKnown RBP8.13□□□□□ -1.11
CUL3-211ENST00000487558 SLC23A3Q6PIS1 610 aa8.13□□□□□ -1.11
CUL3-211ENST00000487558 ARHGAP27Q6ZUM4 889 aa8.13□□□□□ -1.11
CUL3-211ENST00000487558 TRIM59Q8IWR1 403 aa8.13□□□□□ -1.11
CUL3-211ENST00000487558 NIM1KQ8IY84 436 aa8.13□□□□□ -1.11
CUL3-211ENST00000487558 ADCY4Q8NFM4 1077 aa8.13□□□□□ -1.11
CUL3-211ENST00000487558 SYTL5Q8TDW5 730 aaPredicted RBP8.13□□□□□ -1.11
CUL3-211ENST00000487558 MRGPRX3Q96LB0 322 aa8.13□□□□□ -1.11
CUL3-211ENST00000487558 PRDM14Q9GZV8 571 aa8.13□□□□□ -1.11
CUL3-211ENST00000487558 NCOA5Q9HCD5 579 aaKnown RBP8.13□□□□□ -1.11
CUL3-211ENST00000487558 DBX1A6NMT0 343 aa8.12□□□□□ -1.11
CUL3-211ENST00000487558 PABPC4Q13310 644 aaKnown RBP eCLIP8.12□□□□□ -1.11
CUL3-211ENST00000487558 C21orf62-AS1Q17RA5 79 aa8.12□□□□□ -1.11
CUL3-211ENST00000487558 SFRP5Q5T4F7 317 aa8.12□□□□□ -1.11
CUL3-211ENST00000487558 YOD1Q5VVQ6 348 aaPredicted RBP8.12□□□□□ -1.11
CUL3-211ENST00000487558 MFSD3Q96ES6 412 aa8.12□□□□□ -1.11
CUL3-211ENST00000487558 CCDC140Q96MF4 163 aa8.12□□□□□ -1.11
CUL3-211ENST00000487558 ASCC2Q9H1I8 757 aaPredicted RBP8.12□□□□□ -1.11
CUL3-211ENST00000487558 PRDM5Q9NQX1 630 aaPredicted RBP8.12□□□□□ -1.11
CUL3-211ENST00000487558 SF3B6Q9Y3B4 125 aaKnown RBP8.12□□□□□ -1.11
CUL3-211ENST00000487558 IGF2BP3O00425 579 aaKnown RBP eCLIP8.11□□□□□ -1.11
CUL3-211ENST00000487558 CAPNS1P04632 268 aa8.11□□□□□ -1.11
CUL3-211ENST00000487558 ITIH2P19823 946 aa8.11□□□□□ -1.11
CUL3-211ENST00000487558 KIR3DL1P43629 444 aa8.11□□□□□ -1.11
CUL3-211ENST00000487558 FLAD1Q8NFF5 587 aa8.11□□□□□ -1.11
CUL3-211ENST00000487558 BRF1Q92994 677 aa8.11□□□□□ -1.11
CUL3-211ENST00000487558 DSCC1Q9BVC3 393 aa8.11□□□□□ -1.11
CUL3-211ENST00000487558 MRPL4Q9BYD3 311 aaKnown RBP8.11□□□□□ -1.11
CUL3-211ENST00000487558 NOL6Q9H6R4 1146 aaKnown RBP8.11□□□□□ -1.11
CUL3-211ENST00000487558 CGGBP1Q9UFW8 167 aaPredicted RBP8.11□□□□□ -1.11
CUL3-211ENST00000487558 GTF2IRD1Q9UHL9 959 aa8.11□□□□□ -1.11
CUL3-211ENST00000487558 LRRN2O75325 713 aa8.1□□□□□ -1.11
CUL3-211ENST00000487558 KCNH1O95259 989 aa8.1□□□□□ -1.11
CUL3-211ENST00000487558 VIL1P09327 827 aaKnown RBP8.1□□□□□ -1.11
CUL3-211ENST00000487558 GRIA2P42262 883 aa8.1□□□□□ -1.11
CUL3-211ENST00000487558 GRB10Q13322 594 aa8.1□□□□□ -1.11
CUL3-211ENST00000487558 PPP2R5DQ14738 602 aa8.1□□□□□ -1.11
CUL3-211ENST00000487558 CBX2Q14781 532 aaPredicted RBP8.1□□□□□ -1.11
CUL3-211ENST00000487558 TM4SF20Q53R12 229 aa8.1□□□□□ -1.11
CUL3-211ENST00000487558 KRT26Q7Z3Y9 468 aa8.1□□□□□ -1.11
CUL3-211ENST00000487558 DHX37Q8IY37 1157 aaKnown RBP8.1□□□□□ -1.11
CUL3-211ENST00000487558 FIBCD1Q8N539 461 aa8.1□□□□□ -1.11
CUL3-211ENST00000487558 IER2Q9BTL4 223 aa8.1□□□□□ -1.11
CUL3-211ENST00000487558 LGR4Q9BXB1 951 aa8.1□□□□□ -1.11
CUL3-211ENST00000487558 RAPGEF3O95398 923 aa8.09□□□□□ -1.11
CUL3-211ENST00000487558 CBX7O95931 251 aa8.09□□□□□ -1.11
CUL3-211ENST00000487558 HOXC12P31275 282 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms