RNA–Protein interactions for RNA: ENST00000487147.5

COL6A4P1-202, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

BASIC

Gene COL6A4P1, Length 4,317 nt, Biotype transcribed unprocessed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-202ENST00000487147 KRT12Q99456 494 aa8.5□□□□□ -1.05
COL6A4P1-202ENST00000487147 CRNKL1Q9BZJ0 848 aaKnown RBP8.5□□□□□ -1.05
COL6A4P1-202ENST00000487147 TRIM31Q9BZY9 425 aa8.5□□□□□ -1.05
COL6A4P1-202ENST00000487147 RIPOR2Q9Y4F9 1068 aa8.5□□□□□ -1.05
COL6A4P1-202ENST00000487147 CEP83Q9Y592 693 aa8.5□□□□□ -1.05
COL6A4P1-202ENST00000487147 PLEKHG1Q9ULL1 1385 aa8.5□□□□□ -1.05
COL6A4P1-202ENST00000487147 STK36Q9NRP7 1315 aa8.49□□□□□ -1.05
COL6A4P1-202ENST00000487147 EIF3HO15372 352 aaKnown RBP eCLIP8.49□□□□□ -1.05
COL6A4P1-202ENST00000487147 NEFHP12036 1026 aa8.49□□□□□ -1.05
COL6A4P1-202ENST00000487147 ANTXR2P58335 489 aa8.49□□□□□ -1.05
COL6A4P1-202ENST00000487147 ATP2B2Q01814 1243 aa8.49□□□□□ -1.05
COL6A4P1-202ENST00000487147 PPARAQ07869 468 aa8.49□□□□□ -1.05
COL6A4P1-202ENST00000487147 RABL6Q3YEC7 729 aaPredicted RBP8.49□□□□□ -1.05
COL6A4P1-202ENST00000487147 SPTY2D1Q68D10 685 aaPredicted RBP8.49□□□□□ -1.05
COL6A4P1-202ENST00000487147 UTYO14607 1347 aa8.49□□□□□ -1.05
COL6A4P1-202ENST00000487147 FRMD3A2A2Y4 597 aa8.49□□□□□ -1.05
COL6A4P1-202ENST00000487147 H7C1W4 665 aa8.49□□□□□ -1.05
COL6A4P1-202ENST00000487147 RPSAP08865 295 aaKnown RBP8.49□□□□□ -1.05
COL6A4P1-202ENST00000487147 RASSF7Q02833 373 aa8.49□□□□□ -1.05
COL6A4P1-202ENST00000487147 MTMR3Q13615 1198 aa8.49□□□□□ -1.05
COL6A4P1-202ENST00000487147 SEPT7Q16181 437 aaKnown RBP8.49□□□□□ -1.05
COL6A4P1-202ENST00000487147 OXER1Q8TDS5 423 aa8.49□□□□□ -1.05
COL6A4P1-202ENST00000487147 ATG3Q9NT62 314 aa8.49□□□□□ -1.05
COL6A4P1-202ENST00000487147 NFU1Q9UMS0 254 aa8.49□□□□□ -1.05
COL6A4P1-202ENST00000487147 LGALS16A8MUM7 142 aa8.49□□□□□ -1.05
COL6A4P1-202ENST00000487147 KRT13P13646 458 aa8.49□□□□□ -1.05
COL6A4P1-202ENST00000487147 TRHP20396 242 aaPredicted RBP8.49□□□□□ -1.05
COL6A4P1-202ENST00000487147 HNRNPH1P31943 449 aaKnown RBP8.49□□□□□ -1.05
COL6A4P1-202ENST00000487147 PHKA1P46020 1223 aa8.49□□□□□ -1.05
COL6A4P1-202ENST00000487147 GRIN1Q05586 938 aa8.49□□□□□ -1.05
COL6A4P1-202ENST00000487147 TBX2Q13207 712 aaPredicted RBP8.49□□□□□ -1.05
COL6A4P1-202ENST00000487147 TCIRG1Q13488 830 aa8.49□□□□□ -1.05
COL6A4P1-202ENST00000487147 CUL4BQ13620 913 aa8.49□□□□□ -1.05
COL6A4P1-202ENST00000487147 LRCH2Q5VUJ6 765 aa8.49□□□□□ -1.05
COL6A4P1-202ENST00000487147 DZIP1Q86YF9 867 aaKnown RBP8.49□□□□□ -1.05
COL6A4P1-202ENST00000487147 FOXP4Q8IVH2 680 aaPredicted RBP8.49□□□□□ -1.05
COL6A4P1-202ENST00000487147 FAM53CQ9NYF3 392 aa8.49□□□□□ -1.05
COL6A4P1-202ENST00000487147 ZNF185O15231 689 aa8.48□□□□□ -1.05
COL6A4P1-202ENST00000487147 TFRCP02786 760 aaKnown RBP8.48□□□□□ -1.05
COL6A4P1-202ENST00000487147 LONP1P36776 959 aaKnown RBP8.48□□□□□ -1.05
COL6A4P1-202ENST00000487147 KRT79Q5XKE5 535 aa8.48□□□□□ -1.05
COL6A4P1-202ENST00000487147 CABP7Q86V35 215 aa8.48□□□□□ -1.05
COL6A4P1-202ENST00000487147 STMN4Q9H169 189 aaPredicted RBP8.48□□□□□ -1.05
COL6A4P1-202ENST00000487147 LY9Q9HBG7 655 aa8.48□□□□□ -1.05
COL6A4P1-202ENST00000487147 ZNF287Q9HBT7 754 aa8.48□□□□□ -1.05
COL6A4P1-202ENST00000487147 ITIH6Q6UXX5 1313 aa8.48□□□□□ -1.05
COL6A4P1-202ENST00000487147 SALL1Q9NSC2 1324 aa8.48□□□□□ -1.05
COL6A4P1-202ENST00000487147 GSTTP1A0A1W2PQM5 241 aa8.48□□□□□ -1.05
COL6A4P1-202ENST00000487147 KCNK3O14649 394 aa8.48□□□□□ -1.05
COL6A4P1-202ENST00000487147 MEFVO15553 781 aaPredicted RBP8.48□□□□□ -1.05
COL6A4P1-202ENST00000487147 ZNF18P17022 549 aa8.48□□□□□ -1.05
COL6A4P1-202ENST00000487147 RFX5P48382 616 aaPredicted RBP8.48□□□□□ -1.05
COL6A4P1-202ENST00000487147 EHHADHQ08426 723 aa8.48□□□□□ -1.05
COL6A4P1-202ENST00000487147 KLHL30Q0D2K2 578 aa8.48□□□□□ -1.05
COL6A4P1-202ENST00000487147 GRIPAP1Q4V328 841 aa8.48□□□□□ -1.05
COL6A4P1-202ENST00000487147 SFMBT2Q5VUG0 894 aa8.48□□□□□ -1.05
COL6A4P1-202ENST00000487147 TBC1D31Q96DN5 1066 aa8.48□□□□□ -1.05
COL6A4P1-202ENST00000487147 ORAI2Q96SN7 254 aa8.48□□□□□ -1.05
COL6A4P1-202ENST00000487147 RASAL2Q9UJF2 1139 aa8.48□□□□□ -1.05
COL6A4P1-202ENST00000487147 UTP11Q9Y3A2 253 aaKnown RBP8.48□□□□□ -1.05
COL6A4P1-202ENST00000487147 CEMIPQ8WUJ3 1361 aa8.48□□□□□ -1.05
COL6A4P1-202ENST00000487147 TRIM49BA6NDI0 452 aa8.48□□□□□ -1.05
COL6A4P1-202ENST00000487147 GUCY1A2P33402 732 aa8.48□□□□□ -1.05
COL6A4P1-202ENST00000487147 GCKP35557 465 aa8.48□□□□□ -1.05
COL6A4P1-202ENST00000487147 ATG9AQ7Z3C6 839 aa8.48□□□□□ -1.05
COL6A4P1-202ENST00000487147 HOOK3Q86VS8 718 aa8.48□□□□□ -1.05
COL6A4P1-202ENST00000487147 CEP120Q8N960 986 aa8.48□□□□□ -1.05
COL6A4P1-202ENST00000487147 ACTR5Q9H9F9 607 aaPredicted RBP8.48□□□□□ -1.05
COL6A4P1-202ENST00000487147 KAT6BQ8WYB5 2073 aa8.48□□□□□ -1.05
COL6A4P1-202ENST00000487147 CEP170BQ9Y4F5 1589 aaPredicted RBP8.48□□□□□ -1.05
COL6A4P1-202ENST00000487147 NEDD4P46934 1319 aa8.48□□□□□ -1.05
COL6A4P1-202ENST00000487147 CLTAP09496 248 aa8.48□□□□□ -1.05
COL6A4P1-202ENST00000487147 EIF4A3P38919 411 aaKnown RBP8.48□□□□□ -1.05
COL6A4P1-202ENST00000487147 LACTBP83111 547 aaPredicted RBP8.48□□□□□ -1.05
COL6A4P1-202ENST00000487147 PPP2R5AQ15172 486 aa8.48□□□□□ -1.05
COL6A4P1-202ENST00000487147 EP400NLQ6ZTU2 488 aa8.48□□□□□ -1.05
COL6A4P1-202ENST00000487147 DYMQ7RTS9 669 aa8.48□□□□□ -1.05
COL6A4P1-202ENST00000487147 CABLES1Q8TDN4 633 aa8.48□□□□□ -1.05
COL6A4P1-202ENST00000487147 MICAL1Q8TDZ2 1067 aa8.48□□□□□ -1.05
COL6A4P1-202ENST00000487147 ZSCAN10Q96SZ4 725 aaPredicted RBP8.48□□□□□ -1.05
COL6A4P1-202ENST00000487147 LRRC1Q9BTT6 524 aa8.48□□□□□ -1.05
COL6A4P1-202ENST00000487147 THAP9Q9H5L6 903 aa8.48□□□□□ -1.05
COL6A4P1-202ENST00000487147 C6orf50Q9HD87 102 aa8.48□□□□□ -1.05
COL6A4P1-202ENST00000487147 LIMA1Q9UHB6 759 aaKnown RBP8.48□□□□□ -1.05
COL6A4P1-202ENST00000487147 PCDHA13Q9Y5I0 950 aa8.48□□□□□ -1.05
COL6A4P1-202ENST00000487147 CPDO75976 1380 aa8.47□□□□□ -1.05
COL6A4P1-202ENST00000487147 PSMD14O00487 310 aa8.47□□□□□ -1.05
COL6A4P1-202ENST00000487147 PRCPP42785 496 aa8.47□□□□□ -1.05
COL6A4P1-202ENST00000487147 KIF11P52732 1056 aa8.47□□□□□ -1.05
COL6A4P1-202ENST00000487147 SATB1Q01826 763 aa8.47□□□□□ -1.05
COL6A4P1-202ENST00000487147 ACTN3Q08043 901 aaPredicted RBP8.47□□□□□ -1.05
COL6A4P1-202ENST00000487147 CCDC152Q4G0S7 254 aa8.47□□□□□ -1.05
COL6A4P1-202ENST00000487147 SGMS1Q86VZ5 419 aa8.47□□□□□ -1.05
COL6A4P1-202ENST00000487147 SH2D3CQ8N5H7 860 aa8.47□□□□□ -1.05
COL6A4P1-202ENST00000487147 SPATA4Q8NEY3 305 aa8.47□□□□□ -1.05
COL6A4P1-202ENST00000487147 SDR42E1Q8WUS8 393 aa8.47□□□□□ -1.05
COL6A4P1-202ENST00000487147 P2RX5Q93086 422 aa8.47□□□□□ -1.05
COL6A4P1-202ENST00000487147 DHTKD1Q96HY7 919 aaPredicted RBP8.47□□□□□ -1.05
COL6A4P1-202ENST00000487147 NUCKS1Q9H1E3 243 aaKnown RBP8.47□□□□□ -1.05
COL6A4P1-202ENST00000487147 RNF14Q9UBS8 474 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms