RNA–Protein interactions for RNA: ENST00000487147.5

COL6A4P1-202, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

BASIC

Gene COL6A4P1, Length 4,317 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-202ENST00000487147 KRT12Q99456 494 aa8.5□□□□□ -1.05
COL6A4P1-202ENST00000487147 CRNKL1Q9BZJ0 848 aaKnown RBP8.5□□□□□ -1.05
COL6A4P1-202ENST00000487147 TRIM31Q9BZY9 425 aa8.5□□□□□ -1.05
COL6A4P1-202ENST00000487147 RIPOR2Q9Y4F9 1068 aa8.5□□□□□ -1.05
COL6A4P1-202ENST00000487147 CEP83Q9Y592 693 aa8.5□□□□□ -1.05
COL6A4P1-202ENST00000487147 PLEKHG1Q9ULL1 1385 aa8.5□□□□□ -1.05
COL6A4P1-202ENST00000487147 STK36Q9NRP7 1315 aa8.49□□□□□ -1.05
COL6A4P1-202ENST00000487147 EIF3HO15372 352 aaKnown RBP eCLIP8.49□□□□□ -1.05
COL6A4P1-202ENST00000487147 NEFHP12036 1026 aa8.49□□□□□ -1.05
COL6A4P1-202ENST00000487147 ANTXR2P58335 489 aa8.49□□□□□ -1.05
COL6A4P1-202ENST00000487147 ATP2B2Q01814 1243 aa8.49□□□□□ -1.05
COL6A4P1-202ENST00000487147 PPARAQ07869 468 aa8.49□□□□□ -1.05
COL6A4P1-202ENST00000487147 RABL6Q3YEC7 729 aaPredicted RBP8.49□□□□□ -1.05
COL6A4P1-202ENST00000487147 SPTY2D1Q68D10 685 aaPredicted RBP8.49□□□□□ -1.05
COL6A4P1-202ENST00000487147 UTYO14607 1347 aa8.49□□□□□ -1.05
COL6A4P1-202ENST00000487147 FRMD3A2A2Y4 597 aa8.49□□□□□ -1.05
COL6A4P1-202ENST00000487147 H7C1W4 665 aa8.49□□□□□ -1.05
COL6A4P1-202ENST00000487147 RPSAP08865 295 aaKnown RBP8.49□□□□□ -1.05
COL6A4P1-202ENST00000487147 RASSF7Q02833 373 aa8.49□□□□□ -1.05
COL6A4P1-202ENST00000487147 MTMR3Q13615 1198 aa8.49□□□□□ -1.05
COL6A4P1-202ENST00000487147 SEPT7Q16181 437 aaKnown RBP8.49□□□□□ -1.05
COL6A4P1-202ENST00000487147 OXER1Q8TDS5 423 aa8.49□□□□□ -1.05
COL6A4P1-202ENST00000487147 ATG3Q9NT62 314 aa8.49□□□□□ -1.05
COL6A4P1-202ENST00000487147 NFU1Q9UMS0 254 aa8.49□□□□□ -1.05
COL6A4P1-202ENST00000487147 LGALS16A8MUM7 142 aa8.49□□□□□ -1.05
COL6A4P1-202ENST00000487147 KRT13P13646 458 aa8.49□□□□□ -1.05
COL6A4P1-202ENST00000487147 TRHP20396 242 aaPredicted RBP8.49□□□□□ -1.05
COL6A4P1-202ENST00000487147 HNRNPH1P31943 449 aaKnown RBP8.49□□□□□ -1.05
COL6A4P1-202ENST00000487147 PHKA1P46020 1223 aa8.49□□□□□ -1.05
COL6A4P1-202ENST00000487147 GRIN1Q05586 938 aa8.49□□□□□ -1.05
COL6A4P1-202ENST00000487147 TBX2Q13207 712 aaPredicted RBP8.49□□□□□ -1.05
COL6A4P1-202ENST00000487147 TCIRG1Q13488 830 aa8.49□□□□□ -1.05
COL6A4P1-202ENST00000487147 CUL4BQ13620 913 aa8.49□□□□□ -1.05
COL6A4P1-202ENST00000487147 LRCH2Q5VUJ6 765 aa8.49□□□□□ -1.05
COL6A4P1-202ENST00000487147 DZIP1Q86YF9 867 aaKnown RBP8.49□□□□□ -1.05
COL6A4P1-202ENST00000487147 FOXP4Q8IVH2 680 aaPredicted RBP8.49□□□□□ -1.05
COL6A4P1-202ENST00000487147 FAM53CQ9NYF3 392 aa8.49□□□□□ -1.05
COL6A4P1-202ENST00000487147 ZNF185O15231 689 aa8.48□□□□□ -1.05
COL6A4P1-202ENST00000487147 TFRCP02786 760 aaKnown RBP8.48□□□□□ -1.05
COL6A4P1-202ENST00000487147 LONP1P36776 959 aaKnown RBP8.48□□□□□ -1.05
COL6A4P1-202ENST00000487147 KRT79Q5XKE5 535 aa8.48□□□□□ -1.05
COL6A4P1-202ENST00000487147 CABP7Q86V35 215 aa8.48□□□□□ -1.05
COL6A4P1-202ENST00000487147 STMN4Q9H169 189 aaPredicted RBP8.48□□□□□ -1.05
COL6A4P1-202ENST00000487147 LY9Q9HBG7 655 aa8.48□□□□□ -1.05
COL6A4P1-202ENST00000487147 ZNF287Q9HBT7 754 aa8.48□□□□□ -1.05
COL6A4P1-202ENST00000487147 ITIH6Q6UXX5 1313 aa8.48□□□□□ -1.05
COL6A4P1-202ENST00000487147 SALL1Q9NSC2 1324 aa8.48□□□□□ -1.05
COL6A4P1-202ENST00000487147 GSTTP1A0A1W2PQM5 241 aa8.48□□□□□ -1.05
COL6A4P1-202ENST00000487147 KCNK3O14649 394 aa8.48□□□□□ -1.05
COL6A4P1-202ENST00000487147 MEFVO15553 781 aaPredicted RBP8.48□□□□□ -1.05
COL6A4P1-202ENST00000487147 ZNF18P17022 549 aa8.48□□□□□ -1.05
COL6A4P1-202ENST00000487147 RFX5P48382 616 aaPredicted RBP8.48□□□□□ -1.05
COL6A4P1-202ENST00000487147 EHHADHQ08426 723 aa8.48□□□□□ -1.05
COL6A4P1-202ENST00000487147 KLHL30Q0D2K2 578 aa8.48□□□□□ -1.05
COL6A4P1-202ENST00000487147 GRIPAP1Q4V328 841 aa8.48□□□□□ -1.05
COL6A4P1-202ENST00000487147 SFMBT2Q5VUG0 894 aa8.48□□□□□ -1.05
COL6A4P1-202ENST00000487147 TBC1D31Q96DN5 1066 aa8.48□□□□□ -1.05
COL6A4P1-202ENST00000487147 ORAI2Q96SN7 254 aa8.48□□□□□ -1.05
COL6A4P1-202ENST00000487147 RASAL2Q9UJF2 1139 aa8.48□□□□□ -1.05
COL6A4P1-202ENST00000487147 UTP11Q9Y3A2 253 aaKnown RBP8.48□□□□□ -1.05
COL6A4P1-202ENST00000487147 CEMIPQ8WUJ3 1361 aa8.48□□□□□ -1.05
COL6A4P1-202ENST00000487147 TRIM49BA6NDI0 452 aa8.48□□□□□ -1.05
COL6A4P1-202ENST00000487147 GUCY1A2P33402 732 aa8.48□□□□□ -1.05
COL6A4P1-202ENST00000487147 GCKP35557 465 aa8.48□□□□□ -1.05
COL6A4P1-202ENST00000487147 ATG9AQ7Z3C6 839 aa8.48□□□□□ -1.05
COL6A4P1-202ENST00000487147 HOOK3Q86VS8 718 aa8.48□□□□□ -1.05
COL6A4P1-202ENST00000487147 CEP120Q8N960 986 aa8.48□□□□□ -1.05
COL6A4P1-202ENST00000487147 ACTR5Q9H9F9 607 aaPredicted RBP8.48□□□□□ -1.05
COL6A4P1-202ENST00000487147 KAT6BQ8WYB5 2073 aa8.48□□□□□ -1.05
COL6A4P1-202ENST00000487147 CEP170BQ9Y4F5 1589 aaPredicted RBP8.48□□□□□ -1.05
COL6A4P1-202ENST00000487147 NEDD4P46934 1319 aa8.48□□□□□ -1.05
COL6A4P1-202ENST00000487147 CLTAP09496 248 aa8.48□□□□□ -1.05
COL6A4P1-202ENST00000487147 EIF4A3P38919 411 aaKnown RBP8.48□□□□□ -1.05
COL6A4P1-202ENST00000487147 LACTBP83111 547 aaPredicted RBP8.48□□□□□ -1.05
COL6A4P1-202ENST00000487147 PPP2R5AQ15172 486 aa8.48□□□□□ -1.05
COL6A4P1-202ENST00000487147 EP400NLQ6ZTU2 488 aa8.48□□□□□ -1.05
COL6A4P1-202ENST00000487147 DYMQ7RTS9 669 aa8.48□□□□□ -1.05
COL6A4P1-202ENST00000487147 CABLES1Q8TDN4 633 aa8.48□□□□□ -1.05
COL6A4P1-202ENST00000487147 MICAL1Q8TDZ2 1067 aa8.48□□□□□ -1.05
COL6A4P1-202ENST00000487147 ZSCAN10Q96SZ4 725 aaPredicted RBP8.48□□□□□ -1.05
COL6A4P1-202ENST00000487147 LRRC1Q9BTT6 524 aa8.48□□□□□ -1.05
COL6A4P1-202ENST00000487147 THAP9Q9H5L6 903 aa8.48□□□□□ -1.05
COL6A4P1-202ENST00000487147 C6orf50Q9HD87 102 aa8.48□□□□□ -1.05
COL6A4P1-202ENST00000487147 LIMA1Q9UHB6 759 aaKnown RBP8.48□□□□□ -1.05
COL6A4P1-202ENST00000487147 PCDHA13Q9Y5I0 950 aa8.48□□□□□ -1.05
COL6A4P1-202ENST00000487147 CPDO75976 1380 aa8.47□□□□□ -1.05
COL6A4P1-202ENST00000487147 PSMD14O00487 310 aa8.47□□□□□ -1.05
COL6A4P1-202ENST00000487147 PRCPP42785 496 aa8.47□□□□□ -1.05
COL6A4P1-202ENST00000487147 KIF11P52732 1056 aa8.47□□□□□ -1.05
COL6A4P1-202ENST00000487147 SATB1Q01826 763 aa8.47□□□□□ -1.05
COL6A4P1-202ENST00000487147 ACTN3Q08043 901 aaPredicted RBP8.47□□□□□ -1.05
COL6A4P1-202ENST00000487147 CCDC152Q4G0S7 254 aa8.47□□□□□ -1.05
COL6A4P1-202ENST00000487147 SGMS1Q86VZ5 419 aa8.47□□□□□ -1.05
COL6A4P1-202ENST00000487147 SH2D3CQ8N5H7 860 aa8.47□□□□□ -1.05
COL6A4P1-202ENST00000487147 SPATA4Q8NEY3 305 aa8.47□□□□□ -1.05
COL6A4P1-202ENST00000487147 SDR42E1Q8WUS8 393 aa8.47□□□□□ -1.05
COL6A4P1-202ENST00000487147 P2RX5Q93086 422 aa8.47□□□□□ -1.05
COL6A4P1-202ENST00000487147 DHTKD1Q96HY7 919 aaPredicted RBP8.47□□□□□ -1.05
COL6A4P1-202ENST00000487147 NUCKS1Q9H1E3 243 aaKnown RBP8.47□□□□□ -1.05
COL6A4P1-202ENST00000487147 RNF14Q9UBS8 474 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms