RNA–Protein interactions for RNA: ENST00000486995.5

PTCD2-204, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 2

Gene PTCD2, Length 2,648 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-204ENST00000486995 ERVK-24P63145 666 aa13.89□□□□□ -0.19
PTCD2-204ENST00000486995 GABPB1Q06547 395 aaPredicted RBP13.89□□□□□ -0.19
PTCD2-204ENST00000486995 PRR5LQ6MZQ0 368 aa13.89□□□□□ -0.19
PTCD2-204ENST00000486995 FAM196AQ6ZSG2 479 aa13.89□□□□□ -0.19
PTCD2-204ENST00000486995 CREBRFQ8IUR6 639 aa13.89□□□□□ -0.19
PTCD2-204ENST00000486995 EYA3Q99504 573 aa13.89□□□□□ -0.19
PTCD2-204ENST00000486995 PLIN2Q99541 437 aa13.89□□□□□ -0.19
PTCD2-204ENST00000486995 TOM1O60784 492 aa13.89□□□□□ -0.19
PTCD2-204ENST00000486995 TMTC1Q8IUR5 882 aa13.89□□□□□ -0.19
PTCD2-204ENST00000486995 ANKRD20A12PQ8NF67 263 aa13.89□□□□□ -0.19
PTCD2-204ENST00000486995 NEDD1Q8NHV4 660 aa13.89□□□□□ -0.19
PTCD2-204ENST00000486995 ZNF287Q9HBT7 754 aa13.89□□□□□ -0.19
PTCD2-204ENST00000486995 SNED1Q8TER0 1413 aa13.89□□□□□ -0.19
PTCD2-204ENST00000486995 MYL1P05976 194 aa13.88□□□□□ -0.19
PTCD2-204ENST00000486995 PARP1P09874 1014 aaKnown RBP13.88□□□□□ -0.19
PTCD2-204ENST00000486995 IL1R1P14778 569 aa13.88□□□□□ -0.19
PTCD2-204ENST00000486995 RASSF8Q8NHQ8 419 aa13.88□□□□□ -0.19
PTCD2-204ENST00000486995 ARGLU1Q9NWB6 273 aaPredicted RBP13.88□□□□□ -0.19
PTCD2-204ENST00000486995 NHSQ6T4R5 1651 aa13.88□□□□□ -0.19
PTCD2-204ENST00000486995 UFL1O94874 794 aa13.88□□□□□ -0.19
PTCD2-204ENST00000486995 RHOBTB3O94955 611 aa13.88□□□□□ -0.19
PTCD2-204ENST00000486995 PNMA6AP0CW24 399 aaPredicted RBP13.88□□□□□ -0.19
PTCD2-204ENST00000486995 USP17L2Q6R6M4 530 aa13.88□□□□□ -0.19
PTCD2-204ENST00000486995 CERS3Q8IU89 383 aa13.88□□□□□ -0.19
PTCD2-204ENST00000486995 TEX11Q8IYF3 940 aa13.88□□□□□ -0.19
PTCD2-204ENST00000486995 ACRBPQ8NEB7 543 aa13.88□□□□□ -0.19
PTCD2-204ENST00000486995 NUP88Q99567 741 aaPredicted RBP13.88□□□□□ -0.19
PTCD2-204ENST00000486995 KIF5CO60282 957 aa13.87□□□□□ -0.19
PTCD2-204ENST00000486995 FLT1P17948 1338 aa13.87□□□□□ -0.19
PTCD2-204ENST00000486995 NAPAP54920 295 aa13.87□□□□□ -0.19
PTCD2-204ENST00000486995 RHBDL3P58872 404 aa13.87□□□□□ -0.19
PTCD2-204ENST00000486995 UBXN1Q04323 297 aa13.87□□□□□ -0.19
PTCD2-204ENST00000486995 TRIM14Q14142 442 aa13.87□□□□□ -0.19
PTCD2-204ENST00000486995 CRY2Q49AN0 593 aa13.87□□□□□ -0.19
PTCD2-204ENST00000486995 TMCO3Q6UWJ1 677 aa13.87□□□□□ -0.19
PTCD2-204ENST00000486995 GPR161Q8N6U8 529 aaKnown RBP13.87□□□□□ -0.19
PTCD2-204ENST00000486995 GIMAP8Q8ND71 665 aaPredicted RBP13.87□□□□□ -0.19
PTCD2-204ENST00000486995 CERKQ8TCT0 537 aa13.87□□□□□ -0.19
PTCD2-204ENST00000486995 RPGRQ92834 1020 aaKnown RBP13.87□□□□□ -0.19
PTCD2-204ENST00000486995 NAV1Q8NEY1 1877 aa13.87□□□□□ -0.19
PTCD2-204ENST00000486995 SMCO2A6NFE2 343 aa13.87□□□□□ -0.19
PTCD2-204ENST00000486995 ABL1P00519 1130 aa13.87□□□□□ -0.19
PTCD2-204ENST00000486995 CYP26C1Q6V0L0 522 aa13.87□□□□□ -0.19
PTCD2-204ENST00000486995 FAM163AQ96GL9 167 aaPredicted RBP13.87□□□□□ -0.19
PTCD2-204ENST00000486995 TTF2Q9UNY4 1162 aaKnown RBP13.87□□□□□ -0.19
PTCD2-204ENST00000486995 CCNT1O60563 726 aaKnown RBP13.86□□□□□ -0.19
PTCD2-204ENST00000486995 ATP2B4P23634 1241 aa13.86□□□□□ -0.19
PTCD2-204ENST00000486995 KRT9P35527 623 aa13.86□□□□□ -0.19
PTCD2-204ENST00000486995 SEMA3FQ13275 785 aa13.86□□□□□ -0.19
PTCD2-204ENST00000486995 TXNRD1Q16881 649 aa13.86□□□□□ -0.19
PTCD2-204ENST00000486995 LETM2Q2VYF4 491 aa13.86□□□□□ -0.19
PTCD2-204ENST00000486995 KRT25Q7Z3Z0 450 aa13.86□□□□□ -0.19
PTCD2-204ENST00000486995 ZNF507Q8TCN5 953 aa13.86□□□□□ -0.19
PTCD2-204ENST00000486995 CEP95Q96GE4 821 aa13.86□□□□□ -0.19
PTCD2-204ENST00000486995 AK8Q96MA6 479 aa13.86□□□□□ -0.19
PTCD2-204ENST00000486995 ST7Q9NRC1 585 aa13.86□□□□□ -0.19
PTCD2-204ENST00000486995 USP21Q9UK80 565 aa13.86□□□□□ -0.19
PTCD2-204ENST00000486995 TAF1LQ8IZX4 1826 aa13.86□□□□□ -0.19
PTCD2-204ENST00000486995 OR52Z1P0C646 297 aa13.86□□□□□ -0.19
PTCD2-204ENST00000486995 ADRA2BP18089 450 aa13.86□□□□□ -0.19
PTCD2-204ENST00000486995 PLCG1P19174 1290 aa13.86□□□□□ -0.19
PTCD2-204ENST00000486995 NOVP48745 357 aa13.86□□□□□ -0.19
PTCD2-204ENST00000486995 NONOQ15233 471 aaKnown RBP eCLIP13.86□□□□□ -0.19
PTCD2-204ENST00000486995 ZNF569Q5MCW4 686 aa13.86□□□□□ -0.19
PTCD2-204ENST00000486995 TEX35Q5T0J7 233 aa13.86□□□□□ -0.19
PTCD2-204ENST00000486995 CABP7Q86V35 215 aa13.86□□□□□ -0.19
PTCD2-204ENST00000486995 MB21D1Q8N884 522 aa13.86□□□□□ -0.19
PTCD2-204ENST00000486995 RABGGTAQ92696 567 aa13.86□□□□□ -0.19
PTCD2-204ENST00000486995 THAP9Q9H5L6 903 aa13.86□□□□□ -0.19
PTCD2-204ENST00000486995 LRRC4BQ9NT99 713 aa13.86□□□□□ -0.19
PTCD2-204ENST00000486995 GGA1Q9UJY5 639 aa13.86□□□□□ -0.19
PTCD2-204ENST00000486995 SEC31AO94979 1220 aaKnown RBP13.85□□□□□ -0.19
PTCD2-204ENST00000486995 EEF1GP26641 437 aaKnown RBP13.85□□□□□ -0.19
PTCD2-204ENST00000486995 SMARCA1P28370 1054 aa13.85□□□□□ -0.19
PTCD2-204ENST00000486995 GNA11P29992 359 aa13.85□□□□□ -0.19
PTCD2-204ENST00000486995 ARHGAP25P42331 645 aa13.85□□□□□ -0.19
PTCD2-204ENST00000486995 PLA2G4AP47712 749 aa13.85□□□□□ -0.19
PTCD2-204ENST00000486995 TERF2Q15554 542 aa13.85□□□□□ -0.19
PTCD2-204ENST00000486995 TTI2Q6NXR4 508 aa13.85□□□□□ -0.19
PTCD2-204ENST00000486995 RRP36Q96EU6 259 aaKnown RBP13.85□□□□□ -0.19
PTCD2-204ENST00000486995 CUEDC2Q9H467 287 aa13.85□□□□□ -0.19
PTCD2-204ENST00000486995 C6orf50Q9HD87 102 aa13.85□□□□□ -0.19
PTCD2-204ENST00000486995 ZHX1Q9UKY1 873 aaPredicted RBP13.85□□□□□ -0.19
PTCD2-204ENST00000486995 TTC26A0AVF1 554 aa13.85□□□□□ -0.19
PTCD2-204ENST00000486995 LGALS16A8MUM7 142 aa13.85□□□□□ -0.19
PTCD2-204ENST00000486995 PSMA7O14818 248 aa13.85□□□□□ -0.19
PTCD2-204ENST00000486995 PLCG2P16885 1265 aa13.85□□□□□ -0.19
PTCD2-204ENST00000486995 MFSD14BQ5SR56 506 aa13.85□□□□□ -0.19
PTCD2-204ENST00000486995 NEK8Q86SG6 692 aa13.85□□□□□ -0.19
PTCD2-204ENST00000486995 PIGSQ96S52 555 aa13.85□□□□□ -0.19
PTCD2-204ENST00000486995 CHP1Q99653 195 aa13.85□□□□□ -0.19
PTCD2-204ENST00000486995 PARD6BQ9BYG5 372 aa13.85□□□□□ -0.19
PTCD2-204ENST00000486995 MAGEF1Q9HAY2 307 aa13.85□□□□□ -0.19
PTCD2-204ENST00000486995 VAT1LQ9HCJ6 419 aa13.85□□□□□ -0.19
PTCD2-204ENST00000486995 POLLQ9UGP5 575 aa13.85□□□□□ -0.19
PTCD2-204ENST00000486995 CDC23Q9UJX2 597 aa13.85□□□□□ -0.19
PTCD2-204ENST00000486995 LY75O60449 1722 aa13.85□□□□□ -0.19
PTCD2-204ENST00000486995 DDX60LQ5H9U9 1706 aaKnown RBP13.85□□□□□ -0.19
PTCD2-204ENST00000486995 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.84□□□□□ -0.19
PTCD2-204ENST00000486995 A0A1W2PQC6 194 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms