RNA–Protein interactions for RNA: ENST00000486335.1

CCDC142-208, Transcript of coiled-coil domain containing 142, humanhuman

TSL 5

Gene CCDC142, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC142-208ENST00000486335 A0A0U1RQG5 324 aaPredicted RBP11.09□□□□□ -0.63
CCDC142-208ENST00000486335 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.09□□□□□ -0.63
CCDC142-208ENST00000486335 GPR37L1O60883 481 aa11.09□□□□□ -0.63
CCDC142-208ENST00000486335 BEX3Q00994 111 aa11.09□□□□□ -0.63
CCDC142-208ENST00000486335 ICA1Q05084 483 aa11.09□□□□□ -0.63
CCDC142-208ENST00000486335 KCTD2Q14681 263 aa11.09□□□□□ -0.63
CCDC142-208ENST00000486335 CCDC144BQ3MJ40 725 aa11.09□□□□□ -0.63
CCDC142-208ENST00000486335 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.09□□□□□ -0.63
CCDC142-208ENST00000486335 SPRED2Q7Z698 418 aa11.09□□□□□ -0.63
CCDC142-208ENST00000486335 CERS3Q8IU89 383 aa11.09□□□□□ -0.63
CCDC142-208ENST00000486335 AGBL1Q96MI9 1066 aa11.09□□□□□ -0.63
CCDC142-208ENST00000486335 GLT1D1Q96MS3 346 aa11.09□□□□□ -0.63
CCDC142-208ENST00000486335 NOC4LQ9BVI4 516 aaKnown RBP11.09□□□□□ -0.63
CCDC142-208ENST00000486335 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.09□□□□□ -0.63
CCDC142-208ENST00000486335 CNPY2Q9Y2B0 182 aa11.09□□□□□ -0.63
CCDC142-208ENST00000486335 LPXNO60711 386 aa11.08□□□□□ -0.64
CCDC142-208ENST00000486335 C6orf222P0C671 652 aaPredicted RBP11.08□□□□□ -0.64
CCDC142-208ENST00000486335 CDK8P49336 464 aa11.08□□□□□ -0.64
CCDC142-208ENST00000486335 CCL23P55773 120 aa11.08□□□□□ -0.64
CCDC142-208ENST00000486335 TTLL4Q14679 1199 aa11.08□□□□□ -0.64
CCDC142-208ENST00000486335 GNASQ5JWF2 1037 aa11.08□□□□□ -0.64
CCDC142-208ENST00000486335 FAM83BQ5T0W9 1011 aa11.08□□□□□ -0.64
CCDC142-208ENST00000486335 ZNF467Q7Z7K2 595 aaPredicted RBP11.08□□□□□ -0.64
CCDC142-208ENST00000486335 SIRT2Q8IXJ6 389 aa11.08□□□□□ -0.64
CCDC142-208ENST00000486335 SMC5Q8IY18 1101 aa11.08□□□□□ -0.64
CCDC142-208ENST00000486335 NUP88Q99567 741 aaPredicted RBP11.08□□□□□ -0.64
CCDC142-208ENST00000486335 TRPV6Q9H1D0 765 aa11.08□□□□□ -0.64
CCDC142-208ENST00000486335 C1orf115Q9H7X2 142 aa11.08□□□□□ -0.64
CCDC142-208ENST00000486335 ZHX1Q9UKY1 873 aaPredicted RBP11.08□□□□□ -0.64
CCDC142-208ENST00000486335 GNEQ9Y223 722 aaKnown RBP11.08□□□□□ -0.64
CCDC142-208ENST00000486335 DDX49Q9Y6V7 483 aaKnown RBP11.08□□□□□ -0.64
CCDC142-208ENST00000486335 GBF1Q92538 1859 aa11.08□□□□□ -0.64
CCDC142-208ENST00000486335 ZNF532Q9HCE3 1301 aa11.08□□□□□ -0.64
CCDC142-208ENST00000486335 FAM86C2PA6NEL3 165 aa11.07□□□□□ -0.64
CCDC142-208ENST00000486335 TMEM31Q5JXX7 168 aa11.07□□□□□ -0.64
CCDC142-208ENST00000486335 SLC9C2Q5TAH2 1124 aa11.07□□□□□ -0.64
CCDC142-208ENST00000486335 C12orf60Q5U649 245 aa11.07□□□□□ -0.64
CCDC142-208ENST00000486335 CXCL17Q6UXB2 119 aa11.07□□□□□ -0.64
CCDC142-208ENST00000486335 ALYREFQ86V81 257 aaKnown RBP11.07□□□□□ -0.64
CCDC142-208ENST00000486335 MICALL1Q8N3F8 863 aa11.07□□□□□ -0.64
CCDC142-208ENST00000486335 PCSK9Q8NBP7 692 aaKnown RBP11.07□□□□□ -0.64
CCDC142-208ENST00000486335 SCLYQ96I15 445 aa11.07□□□□□ -0.64
CCDC142-208ENST00000486335 HIPK3Q9H422 1215 aa11.07□□□□□ -0.64
CCDC142-208ENST00000486335 ARMT1Q9H993 441 aa11.07□□□□□ -0.64
CCDC142-208ENST00000486335 PCDHA11Q9Y5I1 949 aa11.07□□□□□ -0.64
CCDC142-208ENST00000486335 MROH7Q68CQ1 1323 aa11.07□□□□□ -0.64
CCDC142-208ENST00000486335 PI4K2BG5E9Z4 385 aa11.06□□□□□ -0.64
CCDC142-208ENST00000486335 ATP2A1O14983 1001 aa11.06□□□□□ -0.64
CCDC142-208ENST00000486335 B4GALT4O60513 344 aa11.06□□□□□ -0.64
CCDC142-208ENST00000486335 PPP2R2DQ66LE6 453 aa11.06□□□□□ -0.64
CCDC142-208ENST00000486335 CEP85Q6P2H3 762 aa11.06□□□□□ -0.64
CCDC142-208ENST00000486335 CCDC174Q6PII3 467 aa11.06□□□□□ -0.64
CCDC142-208ENST00000486335 TMED8Q6PL24 325 aaPredicted RBP11.06□□□□□ -0.64
CCDC142-208ENST00000486335 C16orf86Q6ZW13 317 aa11.06□□□□□ -0.64
CCDC142-208ENST00000486335 ARMCX2Q7L311 632 aa11.06□□□□□ -0.64
CCDC142-208ENST00000486335 VTI1AQ96AJ9 217 aa11.06□□□□□ -0.64
CCDC142-208ENST00000486335 CRNKL1Q9BZJ0 848 aaKnown RBP11.06□□□□□ -0.64
CCDC142-208ENST00000486335 ABHD16BQ9H3Z7 469 aa11.06□□□□□ -0.64
CCDC142-208ENST00000486335 CERS4Q9HA82 394 aa11.06□□□□□ -0.64
CCDC142-208ENST00000486335 ARHGEF10LQ9HCE6 1279 aa11.06□□□□□ -0.64
CCDC142-208ENST00000486335 SWAP70Q9UH65 585 aa11.06□□□□□ -0.64
CCDC142-208ENST00000486335 MCM3APO60318 1980 aa11.06□□□□□ -0.64
CCDC142-208ENST00000486335 SOWAHBA6NEL2 793 aa11.05□□□□□ -0.64
CCDC142-208ENST00000486335 USP17L12C9JPN9 530 aa11.05□□□□□ -0.64
CCDC142-208ENST00000486335 USP17L21D6R901 530 aa11.05□□□□□ -0.64
CCDC142-208ENST00000486335 CA3P07451 260 aa11.05□□□□□ -0.64
CCDC142-208ENST00000486335 PSMC6P62333 389 aa11.05□□□□□ -0.64
CCDC142-208ENST00000486335 CNTN2Q02246 1040 aa11.05□□□□□ -0.64
CCDC142-208ENST00000486335 ITGA7Q13683 1181 aa11.05□□□□□ -0.64
CCDC142-208ENST00000486335 SNRNP48Q6IEG0 339 aaKnown RBP11.05□□□□□ -0.64
CCDC142-208ENST00000486335 CCDC144CPQ8IYA2 1237 aa11.05□□□□□ -0.64
CCDC142-208ENST00000486335 CCDC17Q96LX7 622 aa11.05□□□□□ -0.64
CCDC142-208ENST00000486335 TEX13BQ9BXU2 312 aa11.05□□□□□ -0.64
CCDC142-208ENST00000486335 DCTPP1Q9H773 170 aa11.05□□□□□ -0.64
CCDC142-208ENST00000486335 KANSL2Q9H9L4 492 aa11.05□□□□□ -0.64
CCDC142-208ENST00000486335 ATP2A2P16615 1042 aaKnown RBP11.04□□□□□ -0.64
CCDC142-208ENST00000486335 SMPD1P17405 629 aa11.04□□□□□ -0.64
CCDC142-208ENST00000486335 COPB2P35606 906 aa11.04□□□□□ -0.64
CCDC142-208ENST00000486335 TAP1Q03518 808 aa11.04□□□□□ -0.64
CCDC142-208ENST00000486335 OS9Q13438 667 aaPredicted RBP11.04□□□□□ -0.64
CCDC142-208ENST00000486335 FAM133AQ8N9E0 248 aa11.04□□□□□ -0.64
CCDC142-208ENST00000486335 IL27Q8NEV9 243 aa11.04□□□□□ -0.64
CCDC142-208ENST00000486335 DDX11Q96FC9 970 aa11.04□□□□□ -0.64
CCDC142-208ENST00000486335 SLF1Q9BQI6 1058 aa11.04□□□□□ -0.64
CCDC142-208ENST00000486335 RAVER2Q9HCJ3 691 aaKnown RBP11.04□□□□□ -0.64
CCDC142-208ENST00000486335 PDGFCQ9NRA1 345 aa11.04□□□□□ -0.64
CCDC142-208ENST00000486335 SLC4A7Q9Y6M7 1214 aa11.04□□□□□ -0.64
CCDC142-208ENST00000486335 TET1Q8NFU7 2136 aa11.03□□□□□ -0.64
CCDC142-208ENST00000486335 IGKV6D-41A0A0C4DH26 115 aa11.03□□□□□ -0.64
CCDC142-208ENST00000486335 F5H6K3 240 aa11.03□□□□□ -0.64
CCDC142-208ENST00000486335 APBB1O00213 710 aa11.03□□□□□ -0.64
CCDC142-208ENST00000486335 TLR3O15455 904 aaKnown RBP11.03□□□□□ -0.64
CCDC142-208ENST00000486335 HMMRO75330 724 aa11.03□□□□□ -0.64
CCDC142-208ENST00000486335 NDUFB10O96000 172 aa11.03□□□□□ -0.64
CCDC142-208ENST00000486335 KLRC3Q07444 240 aa11.03□□□□□ -0.64
CCDC142-208ENST00000486335 GPNMBQ14956 572 aa11.03□□□□□ -0.64
CCDC142-208ENST00000486335 AAK1Q2M2I8 961 aa11.03□□□□□ -0.64
CCDC142-208ENST00000486335 TAPT1Q6NXT6 567 aa11.03□□□□□ -0.64
CCDC142-208ENST00000486335 CTR9Q6PD62 1173 aa11.03□□□□□ -0.64
CCDC142-208ENST00000486335 AACSQ86V21 672 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms