RNA–Protein interactions for RNA: ENST00000484822.1

RXRA-203, Transcript of retinoid X receptor alpha, humanhuman

TSL 2

Gene RXRA, Length 5,215 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-203ENST00000484822 ADAT2Q7Z6V5 191 aaKnown RBP16.65■□□□□ 0.26
RXRA-203ENST00000484822 VPS54Q9P1Q0 977 aa16.65■□□□□ 0.26
RXRA-203ENST00000484822 TTC36A6NLP5 189 aa16.65■□□□□ 0.26
RXRA-203ENST00000484822 E7EWF7 191 aa16.65■□□□□ 0.26
RXRA-203ENST00000484822 CALUO43852 315 aaPredicted RBP16.65■□□□□ 0.26
RXRA-203ENST00000484822 VPS41P49754 854 aa16.65■□□□□ 0.26
RXRA-203ENST00000484822 SPATA5Q8NB90 893 aa16.65■□□□□ 0.26
RXRA-203ENST00000484822 EPN1Q9Y6I3 576 aaPredicted RBP16.65■□□□□ 0.26
RXRA-203ENST00000484822 H7C1D1 291 aa16.65■□□□□ 0.26
RXRA-203ENST00000484822 SNX16P57768 344 aa16.65■□□□□ 0.26
RXRA-203ENST00000484822 FBXO38Q6PIJ6 1188 aa16.65■□□□□ 0.26
RXRA-203ENST00000484822 CFAP61Q8NHU2 1237 aa16.65■□□□□ 0.26
RXRA-203ENST00000484822 TBC1D22AQ8WUA7 517 aa16.65■□□□□ 0.26
RXRA-203ENST00000484822 MORC3Q14149 939 aa16.65■□□□□ 0.26
RXRA-203ENST00000484822 LIN9Q5TKA1 542 aa16.65■□□□□ 0.26
RXRA-203ENST00000484822 GPHNQ9NQX3 736 aaPredicted RBP16.65■□□□□ 0.26
RXRA-203ENST00000484822 U2AF1L4Q8WU68 220 aaKnown RBP16.64■□□□□ 0.26
RXRA-203ENST00000484822 LUC7L3O95232 432 aaKnown RBP16.64■□□□□ 0.25
RXRA-203ENST00000484822 CTDSPL2Q05D32 466 aa16.64■□□□□ 0.25
RXRA-203ENST00000484822 ANTXR1Q9H6X2 564 aa16.64■□□□□ 0.25
RXRA-203ENST00000484822 ARHGEF10LQ9HCE6 1279 aa16.64■□□□□ 0.25
RXRA-203ENST00000484822 GPCPD1Q9NPB8 672 aa16.64■□□□□ 0.25
RXRA-203ENST00000484822 PARP2Q9UGN5 583 aa16.64■□□□□ 0.25
RXRA-203ENST00000484822 THRAP3Q9Y2W1 955 aaKnown RBP16.64■□□□□ 0.25
RXRA-203ENST00000484822 TERF2Q15554 542 aa16.64■□□□□ 0.25
RXRA-203ENST00000484822 ARHGAP44Q17R89 818 aa16.64■□□□□ 0.25
RXRA-203ENST00000484822 EXOC4Q96A65 974 aa16.64■□□□□ 0.25
RXRA-203ENST00000484822 ASAP1Q9ULH1 1129 aa16.64■□□□□ 0.25
RXRA-203ENST00000484822 SH2D4BQ5SQS7 431 aa16.64■□□□□ 0.25
RXRA-203ENST00000484822 PFDN1O60925 122 aa16.63■□□□□ 0.25
RXRA-203ENST00000484822 CRCPO75575 148 aa16.63■□□□□ 0.25
RXRA-203ENST00000484822 PARD6BQ9BYG5 372 aa16.63■□□□□ 0.25
RXRA-203ENST00000484822 ZNF521Q96K83 1311 aa16.63■□□□□ 0.25
RXRA-203ENST00000484822 CMA1P23946 247 aa16.63■□□□□ 0.25
RXRA-203ENST00000484822 FAM196AQ6ZSG2 479 aa16.63■□□□□ 0.25
RXRA-203ENST00000484822 CABP7Q86V35 215 aa16.63■□□□□ 0.25
RXRA-203ENST00000484822 FCHSD1Q86WN1 690 aa16.63■□□□□ 0.25
RXRA-203ENST00000484822 CTAGE3PQ8IX95 158 aa16.63■□□□□ 0.25
RXRA-203ENST00000484822 CCDC13Q8IYE1 715 aa16.63■□□□□ 0.25
RXRA-203ENST00000484822 CCT6BQ92526 530 aa16.63■□□□□ 0.25
RXRA-203ENST00000484822 CLIC6Q96NY7 704 aa16.63■□□□□ 0.25
RXRA-203ENST00000484822 RBM6P78332 1123 aaKnown RBP16.63■□□□□ 0.25
RXRA-203ENST00000484822 CAPN12Q6ZSI9 719 aa16.63■□□□□ 0.25
RXRA-203ENST00000484822 CCDC117Q8IWD4 279 aaPredicted RBP16.63■□□□□ 0.25
RXRA-203ENST00000484822 LSM14BQ9BX40 385 aaKnown RBP16.63■□□□□ 0.25
RXRA-203ENST00000484822 NUCKS1Q9H1E3 243 aaKnown RBP16.63■□□□□ 0.25
RXRA-203ENST00000484822 LPXNO60711 386 aa16.63■□□□□ 0.25
RXRA-203ENST00000484822 CASP14P31944 242 aa16.63■□□□□ 0.25
RXRA-203ENST00000484822 TNFAIP1Q13829 316 aa16.63■□□□□ 0.25
RXRA-203ENST00000484822 TAF12Q16514 161 aa16.63■□□□□ 0.25
RXRA-203ENST00000484822 LGSNQ5TDP6 509 aa16.63■□□□□ 0.25
RXRA-203ENST00000484822 EEF2KMTQ96G04 330 aa16.63■□□□□ 0.25
RXRA-203ENST00000484822 CCDC169A6NNP5 214 aa16.63■□□□□ 0.25
RXRA-203ENST00000484822 IFNB1P01574 187 aa16.63■□□□□ 0.25
RXRA-203ENST00000484822 CRKLP46109 303 aaKnown RBP16.63■□□□□ 0.25
RXRA-203ENST00000484822 ZNF408Q9H9D4 720 aa16.63■□□□□ 0.25
RXRA-203ENST00000484822 MYO1CO00159 1063 aa16.62■□□□□ 0.25
RXRA-203ENST00000484822 GYS2P54840 703 aa16.62■□□□□ 0.25
RXRA-203ENST00000484822 HAUS3Q68CZ6 603 aa16.62■□□□□ 0.25
RXRA-203ENST00000484822 C11orf57Q6ZUT1 292 aaPredicted RBP16.62■□□□□ 0.25
RXRA-203ENST00000484822 CCDC197Q8NCU1 140 aa16.62■□□□□ 0.25
RXRA-203ENST00000484822 EFCC1Q9HA90 598 aa16.62■□□□□ 0.25
RXRA-203ENST00000484822 DNM2P50570 870 aa16.62■□□□□ 0.25
RXRA-203ENST00000484822 MAEAQ7L5Y9 396 aa16.62■□□□□ 0.25
RXRA-203ENST00000484822 FAF1Q9UNN5 650 aaPredicted RBP16.62■□□□□ 0.25
RXRA-203ENST00000484822 NONOQ15233 471 aaKnown RBP eCLIP16.62■□□□□ 0.252e-6■■■■□ 24.9
RXRA-203ENST00000484822 DCUN1D2Q6PH85 259 aa16.62■□□□□ 0.25
RXRA-203ENST00000484822 BACH1O14867 736 aa16.62■□□□□ 0.25
RXRA-203ENST00000484822 EXOC3O60645 756 aa16.62■□□□□ 0.25
RXRA-203ENST00000484822 NAA35Q5VZE5 725 aa16.62■□□□□ 0.25
RXRA-203ENST00000484822 CCDC151A5D8V7 595 aa16.61■□□□□ 0.25
RXRA-203ENST00000484822 ZAP70P43403 619 aa16.61■□□□□ 0.25
RXRA-203ENST00000484822 CASC4Q6P4E1 433 aa16.61■□□□□ 0.25
RXRA-203ENST00000484822 N4BP2L2Q92802 583 aaPredicted RBP16.61■□□□□ 0.25
RXRA-203ENST00000484822 PNMA6AP0CW24 399 aaPredicted RBP16.61■□□□□ 0.25
RXRA-203ENST00000484822 RFX1P22670 979 aa16.61■□□□□ 0.25
RXRA-203ENST00000484822 UNC5CLQ8IV45 518 aa16.61■□□□□ 0.25
RXRA-203ENST00000484822 CCDC24Q8N4L8 307 aa16.61■□□□□ 0.25
RXRA-203ENST00000484822 ZSWIM6Q9HCJ5 1215 aa16.61■□□□□ 0.25
RXRA-203ENST00000484822 SAP30BPQ9UHR5 308 aaKnown RBP16.61■□□□□ 0.25
RXRA-203ENST00000484822 DIP2CQ9Y2E4 1556 aa16.61■□□□□ 0.25
RXRA-203ENST00000484822 DPCR1Q3MIW9 517 aa16.61■□□□□ 0.25
RXRA-203ENST00000484822 INTS9Q9NV88 658 aaKnown RBP16.61■□□□□ 0.25
RXRA-203ENST00000484822 A0A0D9SFI3 127 aa16.61■□□□□ 0.25
RXRA-203ENST00000484822 MAN1A1P33908 653 aa16.61■□□□□ 0.25
RXRA-203ENST00000484822 APBA1Q02410 837 aa16.61■□□□□ 0.25
RXRA-203ENST00000484822 NLGN1Q8N2Q7 840 aa16.61■□□□□ 0.25
RXRA-203ENST00000484822 KRT12Q99456 494 aa16.61■□□□□ 0.25
RXRA-203ENST00000484822 CDC25BP30305 580 aa16.6■□□□□ 0.25
RXRA-203ENST00000484822 EHHADHQ08426 723 aa16.6■□□□□ 0.25
RXRA-203ENST00000484822 NCAPH2Q6IBW4 605 aa16.6■□□□□ 0.25
RXRA-203ENST00000484822 CMTR1Q8N1G2 835 aaKnown RBP16.6■□□□□ 0.25
RXRA-203ENST00000484822 TSPYL2Q9H2G4 693 aaPredicted RBP16.6■□□□□ 0.25
RXRA-203ENST00000484822 TULP4Q9NRJ4 1543 aa16.6■□□□□ 0.25
RXRA-203ENST00000484822 SPATA1Q5VX52 437 aa16.6■□□□□ 0.25
RXRA-203ENST00000484822 PCDHA5Q9Y5H7 936 aa16.6■□□□□ 0.25
RXRA-203ENST00000484822 IBTKQ9P2D0 1353 aaPredicted RBP16.6■□□□□ 0.25
RXRA-203ENST00000484822 SETBP1Q9Y6X0 1596 aa16.6■□□□□ 0.25
RXRA-203ENST00000484822 ADD1P35611 737 aaKnown RBP16.6■□□□□ 0.25
RXRA-203ENST00000484822 NOSTRINQ8IVI9 506 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms