RNA–Protein interactions for RNA: ENST00000484275.1

SCAF11-207, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-207ENST00000484275 TRIM13O60858 407 aa7.78□□□□□ -1.16
SCAF11-207ENST00000484275 CTSWP56202 376 aa7.78□□□□□ -1.16
SCAF11-207ENST00000484275 RACK1P63244 317 aaKnown RBP7.78□□□□□ -1.16
SCAF11-207ENST00000484275 TCERG1LQ5VWI1 586 aa7.78□□□□□ -1.16
SCAF11-207ENST00000484275 RUFY4Q6ZNE9 571 aa7.78□□□□□ -1.16
SCAF11-207ENST00000484275 TMEFF1Q8IYR6 380 aa7.78□□□□□ -1.16
SCAF11-207ENST00000484275 DACT3Q96B18 629 aaPredicted RBP7.78□□□□□ -1.16
SCAF11-207ENST00000484275 DHRS1Q96LJ7 313 aa7.78□□□□□ -1.16
SCAF11-207ENST00000484275 TNFRSF12AQ9NP84 129 aa7.78□□□□□ -1.16
SCAF11-207ENST00000484275 IMPACTQ9P2X3 320 aa7.78□□□□□ -1.16
SCAF11-207ENST00000484275 PPT2Q9UMR5 302 aa7.78□□□□□ -1.16
SCAF11-207ENST00000484275 H0Y8X5 98 aa7.77□□□□□ -1.17
SCAF11-207ENST00000484275 RFXAPO00287 272 aa7.77□□□□□ -1.17
SCAF11-207ENST00000484275 IRS4O14654 1257 aaPredicted RBP7.77□□□□□ -1.17
SCAF11-207ENST00000484275 PRRG2O14669 202 aa7.77□□□□□ -1.17
SCAF11-207ENST00000484275 GSNP06396 782 aa7.77□□□□□ -1.17
SCAF11-207ENST00000484275 MSL3P1P0C860 447 aa7.77□□□□□ -1.17
SCAF11-207ENST00000484275 CYP4F8P98187 520 aa7.77□□□□□ -1.17
SCAF11-207ENST00000484275 MARCH10Q8NA82 808 aaPredicted RBP7.77□□□□□ -1.17
SCAF11-207ENST00000484275 NUP43Q8NFH3 380 aa7.77□□□□□ -1.17
SCAF11-207ENST00000484275 MZB1Q8WU39 189 aa7.77□□□□□ -1.17
SCAF11-207ENST00000484275 FERD3LQ96RJ6 166 aa7.77□□□□□ -1.17
SCAF11-207ENST00000484275 DSCC1Q9BVC3 393 aa7.77□□□□□ -1.17
SCAF11-207ENST00000484275 A0A0G2JLL6 359 aaPredicted RBP7.76□□□□□ -1.17
SCAF11-207ENST00000484275 B8ZZF3 427 aa7.76□□□□□ -1.17
SCAF11-207ENST00000484275 MPOP05164 745 aa7.76□□□□□ -1.17
SCAF11-207ENST00000484275 GSTM1P09488 218 aa7.76□□□□□ -1.17
SCAF11-207ENST00000484275 IMPDH2P12268 514 aa7.76□□□□□ -1.17
SCAF11-207ENST00000484275 ENDOUP21128 410 aaKnown RBP7.76□□□□□ -1.17
SCAF11-207ENST00000484275 ZNF445P59923 1031 aa7.76□□□□□ -1.17
SCAF11-207ENST00000484275 RAB3GAP1Q15042 981 aa7.76□□□□□ -1.17
SCAF11-207ENST00000484275 ANKRD39Q53RE8 183 aa7.76□□□□□ -1.17
SCAF11-207ENST00000484275 TMC6Q7Z403 805 aa7.76□□□□□ -1.17
SCAF11-207ENST00000484275 IGDCC3Q8IVU1 814 aa7.76□□□□□ -1.17
SCAF11-207ENST00000484275 BRF1Q92994 677 aa7.76□□□□□ -1.17
SCAF11-207ENST00000484275 TM9SF2Q99805 663 aa7.76□□□□□ -1.17
SCAF11-207ENST00000484275 KRTAP4-11Q9BYQ6 195 aa7.76□□□□□ -1.17
SCAF11-207ENST00000484275 ZCCHC4Q9H5U6 513 aa7.76□□□□□ -1.17
SCAF11-207ENST00000484275 GP6Q9HCN6 339 aa7.76□□□□□ -1.17
SCAF11-207ENST00000484275 FAM86C1Q9NVL1 165 aa7.76□□□□□ -1.17
SCAF11-207ENST00000484275 NUDT19A8MXV4 375 aa7.75□□□□□ -1.17
SCAF11-207ENST00000484275 TP53P04637 393 aaPredicted RBP7.75□□□□□ -1.17
SCAF11-207ENST00000484275 ARL4AP40617 200 aa7.75□□□□□ -1.17
SCAF11-207ENST00000484275 BUD31P41223 144 aaPredicted RBP7.75□□□□□ -1.17
SCAF11-207ENST00000484275 MVKQ03426 396 aa7.75□□□□□ -1.17
SCAF11-207ENST00000484275 LAPTM5Q13571 262 aa7.75□□□□□ -1.17
SCAF11-207ENST00000484275 RPTNQ6XPR3 784 aa7.75□□□□□ -1.17
SCAF11-207ENST00000484275 UNC5AQ6ZN44 842 aa7.75□□□□□ -1.17
SCAF11-207ENST00000484275 LDHDQ86WU2 507 aa7.75□□□□□ -1.17
SCAF11-207ENST00000484275 RBBP8NLQ8NC74 664 aaPredicted RBP7.75□□□□□ -1.17
SCAF11-207ENST00000484275 BCL11AQ9H165 835 aa7.75□□□□□ -1.17
SCAF11-207ENST00000484275 METTL5Q9NRN9 209 aaKnown RBP7.75□□□□□ -1.17
SCAF11-207ENST00000484275 ZNF451Q9Y4E5 1061 aa7.75□□□□□ -1.17
SCAF11-207ENST00000484275 ABLIM1O14639 778 aa7.74□□□□□ -1.17
SCAF11-207ENST00000484275 AFF3P51826 1226 aaKnown RBP7.74□□□□□ -1.17
SCAF11-207ENST00000484275 CBX2Q14781 532 aaPredicted RBP7.74□□□□□ -1.17
SCAF11-207ENST00000484275 VMACQ2NL98 169 aa7.74□□□□□ -1.17
SCAF11-207ENST00000484275 FBXW10Q5XX13 1052 aa7.74□□□□□ -1.17
SCAF11-207ENST00000484275 LSRQ86X29 649 aaPredicted RBP7.74□□□□□ -1.17
SCAF11-207ENST00000484275 SRRTQ9BXP5 876 aaKnown RBP7.74□□□□□ -1.17
SCAF11-207ENST00000484275 DDX41Q9UJV9 622 aaKnown RBP7.74□□□□□ -1.17
SCAF11-207ENST00000484275 PCDHA5Q9Y5H7 936 aa7.74□□□□□ -1.17
SCAF11-207ENST00000484275 CD247P20963 164 aa7.73□□□□□ -1.17
SCAF11-207ENST00000484275 GUCY2CP25092 1073 aa7.73□□□□□ -1.17
SCAF11-207ENST00000484275 NCKAP1LP55160 1127 aa7.73□□□□□ -1.17
SCAF11-207ENST00000484275 FAM129CQ86XR2 697 aa7.73□□□□□ -1.17
SCAF11-207ENST00000484275 TMEM151BQ8IW70 566 aa7.73□□□□□ -1.17
SCAF11-207ENST00000484275 SMARCC1Q92922 1105 aaPredicted RBP7.73□□□□□ -1.17
SCAF11-207ENST00000484275 FCRL3Q96P31 734 aaPredicted RBP7.73□□□□□ -1.17
SCAF11-207ENST00000484275 LTBP3Q9NS15 1303 aa7.73□□□□□ -1.17
SCAF11-207ENST00000484275 FGF10O15520 208 aaPredicted RBP7.72□□□□□ -1.17
SCAF11-207ENST00000484275 CBFA2T2O43439 604 aa7.72□□□□□ -1.17
SCAF11-207ENST00000484275 PLEKHN1Q494U1 663 aaPredicted RBP7.72□□□□□ -1.17
SCAF11-207ENST00000484275 NOL9Q5SY16 702 aaKnown RBP7.72□□□□□ -1.17
SCAF11-207ENST00000484275 TMCO4Q5TGY1 634 aa7.72□□□□□ -1.17
SCAF11-207ENST00000484275 OLFML2BQ68BL8 750 aa7.72□□□□□ -1.17
SCAF11-207ENST00000484275 CWF19L1Q69YN2 538 aaKnown RBP7.72□□□□□ -1.17
SCAF11-207ENST00000484275 CCDC81Q6ZN84 652 aa7.72□□□□□ -1.17
SCAF11-207ENST00000484275 FIBCD1Q8N539 461 aa7.72□□□□□ -1.17
SCAF11-207ENST00000484275 RNF34Q969K3 372 aa7.72□□□□□ -1.17
SCAF11-207ENST00000484275 KRTAP9-3Q9BYQ3 159 aa7.72□□□□□ -1.17
SCAF11-207ENST00000484275 XYLT2Q9H1B5 865 aa7.72□□□□□ -1.17
SCAF11-207ENST00000484275 ZNF214Q9UL59 606 aaPredicted RBP7.72□□□□□ -1.17
SCAF11-207ENST00000484275 PLA2G2DQ9UNK4 145 aa7.72□□□□□ -1.17
SCAF11-207ENST00000484275 HCFC2Q9Y5Z7 792 aa7.72□□□□□ -1.17
SCAF11-207ENST00000484275 FHOD1Q9Y613 1164 aa7.72□□□□□ -1.17
SCAF11-207ENST00000484275 RECKO95980 971 aa7.71□□□□□ -1.18
SCAF11-207ENST00000484275 IFNGR1P15260 489 aa7.71□□□□□ -1.18
SCAF11-207ENST00000484275 LCE5AQ5TCM9 118 aa7.71□□□□□ -1.18
SCAF11-207ENST00000484275 NAT16Q8N8M0 369 aa7.71□□□□□ -1.18
SCAF11-207ENST00000484275 GINM1Q9NU53 330 aa7.71□□□□□ -1.18
SCAF11-207ENST00000484275 HLA-DQA1Q5Y7H0 255 aa7.7□□□□□ -1.18
SCAF11-207ENST00000484275 CNKSR3Q6P9H4 555 aa7.7□□□□□ -1.18
SCAF11-207ENST00000484275 RELTQ969Z4 430 aa7.7□□□□□ -1.18
SCAF11-207ENST00000484275 IRS2Q9Y4H2 1338 aa7.7□□□□□ -1.18
SCAF11-207ENST00000484275 ADAMTS20P59510 1910 aa7.7□□□□□ -1.18
SCAF11-207ENST00000484275 BUB1BO60566 1050 aaPredicted RBP7.69□□□□□ -1.18
SCAF11-207ENST00000484275 MAPKAPK2P49137 400 aa7.69□□□□□ -1.18
SCAF11-207ENST00000484275 PAK2Q13177 524 aa7.69□□□□□ -1.18
SCAF11-207ENST00000484275 MCMBPQ9BTE3 642 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms