RNA–Protein interactions for RNA: ENST00000483956.1

SEC61A1-205, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 1 (best)

Gene SEC61A1, Length 3,046 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-205ENST00000483956 SEC31BQ9NQW1 1179 aa12.91□□□□□ -0.34
SEC61A1-205ENST00000483956 HDAC6Q9UBN7 1215 aa12.91□□□□□ -0.34
SEC61A1-205ENST00000483956 WWC3Q9ULE0 1092 aa12.91□□□□□ -0.34
SEC61A1-205ENST00000483956 SYNRGQ9UMZ2 1314 aa12.91□□□□□ -0.34
SEC61A1-205ENST00000483956 DCCP43146 1447 aa12.91□□□□□ -0.34
SEC61A1-205ENST00000483956 COL22A1Q8NFW1 1626 aaPredicted RBP12.91□□□□□ -0.34
SEC61A1-205ENST00000483956 GOLGA8KD6RF30 607 aa12.91□□□□□ -0.34
SEC61A1-205ENST00000483956 OPLAHO14841 1288 aa12.91□□□□□ -0.34
SEC61A1-205ENST00000483956 TEX33O43247 280 aa12.91□□□□□ -0.34
SEC61A1-205ENST00000483956 ITGA6P23229 1130 aa12.91□□□□□ -0.34
SEC61A1-205ENST00000483956 RBL2Q08999 1139 aa12.91□□□□□ -0.34
SEC61A1-205ENST00000483956 AKNAD1Q5T1N1 836 aa12.91□□□□□ -0.34
SEC61A1-205ENST00000483956 CCNI2Q6ZMN8 369 aaPredicted RBP12.91□□□□□ -0.34
SEC61A1-205ENST00000483956 SH3RF1Q7Z6J0 888 aa12.91□□□□□ -0.34
SEC61A1-205ENST00000483956 CNGA4Q8IV77 575 aa12.91□□□□□ -0.34
SEC61A1-205ENST00000483956 IFNL3Q8IZI9 196 aa12.91□□□□□ -0.34
SEC61A1-205ENST00000483956 CCDC85AQ96PX6 553 aaPredicted RBP12.91□□□□□ -0.34
SEC61A1-205ENST00000483956 KCNJ14Q9UNX9 436 aa12.91□□□□□ -0.34
SEC61A1-205ENST00000483956 ANKRD36CQ5JPF3 1778 aa12.9□□□□□ -0.34
SEC61A1-205ENST00000483956 TULP1O00294 542 aaPredicted RBP12.9□□□□□ -0.34
SEC61A1-205ENST00000483956 RAB27AP51159 221 aa12.9□□□□□ -0.34
SEC61A1-205ENST00000483956 SPRED3Q2MJR0 410 aa12.9□□□□□ -0.34
SEC61A1-205ENST00000483956 THEMIS2Q5TEJ8 643 aa12.9□□□□□ -0.34
SEC61A1-205ENST00000483956 CRACR2BQ8N4Y2 399 aaPredicted RBP12.9□□□□□ -0.34
SEC61A1-205ENST00000483956 MAGEC3Q8TD91 643 aa12.9□□□□□ -0.34
SEC61A1-205ENST00000483956 RSRC1Q96IZ7 334 aaKnown RBP12.9□□□□□ -0.34
SEC61A1-205ENST00000483956 NAPBQ9H115 298 aa12.9□□□□□ -0.34
SEC61A1-205ENST00000483956 CSRNP2Q9H175 543 aa12.9□□□□□ -0.34
SEC61A1-205ENST00000483956 SLC39A2Q9NP94 309 aa12.9□□□□□ -0.34
SEC61A1-205ENST00000483956 TTF2Q9UNY4 1162 aaKnown RBP12.9□□□□□ -0.34
SEC61A1-205ENST00000483956 ENC1O14682 589 aa12.9□□□□□ -0.34
SEC61A1-205ENST00000483956 PDE8BO95263 885 aa12.9□□□□□ -0.34
SEC61A1-205ENST00000483956 MYH6P13533 1939 aa12.9□□□□□ -0.34
SEC61A1-205ENST00000483956 LSP1P33241 339 aa12.9□□□□□ -0.34
SEC61A1-205ENST00000483956 HDLBPQ00341 1268 aaKnown RBP12.9□□□□□ -0.34
SEC61A1-205ENST00000483956 BCORQ6W2J9 1755 aa12.9□□□□□ -0.34
SEC61A1-205ENST00000483956 KIF6Q6ZMV9 814 aa12.9□□□□□ -0.34
SEC61A1-205ENST00000483956 SND1Q7KZF4 910 aaKnown RBP eCLIP12.9□□□□□ -0.345e-16■■■□□ 17.1
SEC61A1-205ENST00000483956 PAGR1Q9BTK6 254 aa12.9□□□□□ -0.34
SEC61A1-205ENST00000483956 TACC3Q9Y6A5 838 aa12.9□□□□□ -0.34
SEC61A1-205ENST00000483956 ANKRD18BA2A2Z9 1011 aa12.89□□□□□ -0.35
SEC61A1-205ENST00000483956 SRGAP2O75044 1071 aa12.89□□□□□ -0.35
SEC61A1-205ENST00000483956 SEC24CP53992 1094 aa12.89□□□□□ -0.35
SEC61A1-205ENST00000483956 CTSWP56202 376 aa12.89□□□□□ -0.35
SEC61A1-205ENST00000483956 GUCY1A3Q02108 690 aa12.89□□□□□ -0.35
SEC61A1-205ENST00000483956 TBC1D25Q3MII6 688 aa12.89□□□□□ -0.35
SEC61A1-205ENST00000483956 KCTD16Q68DU8 428 aa12.89□□□□□ -0.35
SEC61A1-205ENST00000483956 CCDC50Q8IVM0 306 aa12.89□□□□□ -0.35
SEC61A1-205ENST00000483956 C3orf20Q8ND61 904 aa12.89□□□□□ -0.35
SEC61A1-205ENST00000483956 CABLES1Q8TDN4 633 aa12.89□□□□□ -0.35
SEC61A1-205ENST00000483956 CAPZA3Q96KX2 299 aa12.89□□□□□ -0.35
SEC61A1-205ENST00000483956 GSDMAQ96QA5 445 aa12.89□□□□□ -0.35
SEC61A1-205ENST00000483956 GREM2Q9H772 168 aa12.89□□□□□ -0.35
SEC61A1-205ENST00000483956 MYO1AQ9UBC5 1043 aa12.89□□□□□ -0.35
SEC61A1-205ENST00000483956 CDC25CP30307 473 aa12.89□□□□□ -0.35
SEC61A1-205ENST00000483956 NR5A1Q13285 461 aa12.89□□□□□ -0.35
SEC61A1-205ENST00000483956 TMTC2Q8N394 836 aa12.89□□□□□ -0.35
SEC61A1-205ENST00000483956 TBC1D31Q96DN5 1066 aa12.89□□□□□ -0.35
SEC61A1-205ENST00000483956 EPN3Q9H201 632 aa12.89□□□□□ -0.35
SEC61A1-205ENST00000483956 INCENPQ9NQS7 918 aa12.89□□□□□ -0.35
SEC61A1-205ENST00000483956 CNNM1Q9NRU3 951 aa12.89□□□□□ -0.35
SEC61A1-205ENST00000483956 TAOK2Q9UL54 1235 aa12.89□□□□□ -0.35
SEC61A1-205ENST00000483956 TARSL2A2RTX5 802 aaKnown RBP12.88□□□□□ -0.35
SEC61A1-205ENST00000483956 SLC8A1P32418 973 aa12.88□□□□□ -0.35
SEC61A1-205ENST00000483956 PHKA1P46020 1223 aa12.88□□□□□ -0.35
SEC61A1-205ENST00000483956 CTDSPL2Q05D32 466 aa12.88□□□□□ -0.35
SEC61A1-205ENST00000483956 FILIP1LQ4L180 1135 aa12.88□□□□□ -0.35
SEC61A1-205ENST00000483956 MFSD6Q6ZSS7 791 aa12.88□□□□□ -0.35
SEC61A1-205ENST00000483956 USP49Q70CQ1 688 aa12.88□□□□□ -0.35
SEC61A1-205ENST00000483956 KIAA1328Q86T90 577 aa12.88□□□□□ -0.35
SEC61A1-205ENST00000483956 OR8K1Q8NGG5 319 aa12.88□□□□□ -0.35
SEC61A1-205ENST00000483956 RASSF8Q8NHQ8 419 aa12.88□□□□□ -0.35
SEC61A1-205ENST00000483956 TOGARAM1Q9Y4F4 1720 aa12.88□□□□□ -0.35
SEC61A1-205ENST00000483956 GOLGA6L7A0A1B0GV03 622 aa12.88□□□□□ -0.35
SEC61A1-205ENST00000483956 CD44P16070 742 aaKnown RBP12.88□□□□□ -0.35
SEC61A1-205ENST00000483956 WTAPQ15007 396 aa12.88□□□□□ -0.35
SEC61A1-205ENST00000483956 SLC5A9Q2M3M2 681 aa12.88□□□□□ -0.35
SEC61A1-205ENST00000483956 PLCH1Q4KWH8 1693 aa12.88□□□□□ -0.35
SEC61A1-205ENST00000483956 GSG1L2A8MUP6 293 aa12.88□□□□□ -0.35
SEC61A1-205ENST00000483956 DNM1LO00429 736 aa12.88□□□□□ -0.35
SEC61A1-205ENST00000483956 MBD4O95243 580 aa12.88□□□□□ -0.35
SEC61A1-205ENST00000483956 BMP15O95972 392 aa12.88□□□□□ -0.35
SEC61A1-205ENST00000483956 GYPCP04921 128 aa12.88□□□□□ -0.35
SEC61A1-205ENST00000483956 DPYDQ12882 1025 aa12.88□□□□□ -0.35
SEC61A1-205ENST00000483956 CAPRIN2Q6IMN6 1127 aaKnown RBP12.88□□□□□ -0.35
SEC61A1-205ENST00000483956 GIGYF2Q6Y7W6 1299 aaKnown RBP12.88□□□□□ -0.35
SEC61A1-205ENST00000483956 TRAPPC11Q7Z392 1133 aa12.88□□□□□ -0.35
SEC61A1-205ENST00000483956 TMTC1Q8IUR5 882 aa12.88□□□□□ -0.35
SEC61A1-205ENST00000483956 AENQ8WTP8 325 aaKnown RBP12.88□□□□□ -0.35
SEC61A1-205ENST00000483956 NSMCE1Q8WV22 266 aa12.88□□□□□ -0.35
SEC61A1-205ENST00000483956 PAGE5Q96GU1 130 aa12.88□□□□□ -0.35
SEC61A1-205ENST00000483956 RNPC3Q96LT9 517 aaKnown RBP12.88□□□□□ -0.35
SEC61A1-205ENST00000483956 A0A087X0B3 334 aa12.87□□□□□ -0.35
SEC61A1-205ENST00000483956 TRIM75PA6NK02 468 aa12.87□□□□□ -0.35
SEC61A1-205ENST00000483956 PPP1R3GB7ZBB8 358 aa12.87□□□□□ -0.35
SEC61A1-205ENST00000483956 GNAT2P19087 354 aa12.87□□□□□ -0.35
SEC61A1-205ENST00000483956 PPP2R5BQ15173 497 aa12.87□□□□□ -0.35
SEC61A1-205ENST00000483956 PUM3Q15397 648 aaKnown RBP12.87□□□□□ -0.35
SEC61A1-205ENST00000483956 CCDC181Q5TID7 509 aa12.87□□□□□ -0.35
SEC61A1-205ENST00000483956 CCDC121Q6ZUS5 278 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms