RNA–Protein interactions for RNA: ENST00000483338.1

COL4A5-205, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 3,622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-205ENST00000483338 ALDH5A1P51649 535 aaPredicted RBP8.66□□□□□ -1.02
COL4A5-205ENST00000483338 ANKRD1Q15327 319 aa8.66□□□□□ -1.02
COL4A5-205ENST00000483338 EMBQ6PCB8 327 aa8.66□□□□□ -1.02
COL4A5-205ENST00000483338 NCCRP1Q6ZVX7 275 aaPredicted RBP8.66□□□□□ -1.02
COL4A5-205ENST00000483338 LRRC1Q9BTT6 524 aa8.66□□□□□ -1.02
COL4A5-205ENST00000483338 PCDH18Q9HCL0 1135 aa8.66□□□□□ -1.02
COL4A5-205ENST00000483338 DLGAP2Q9P1A6 1054 aa8.66□□□□□ -1.02
COL4A5-205ENST00000483338 CEP131Q9UPN4 1083 aa8.66□□□□□ -1.02
COL4A5-205ENST00000483338 EMILIN1Q9Y6C2 1016 aa8.66□□□□□ -1.02
COL4A5-205ENST00000483338 CFAP73A6NFT4 308 aa8.66□□□□□ -1.02
COL4A5-205ENST00000483338 PSMD14O00487 310 aa8.66□□□□□ -1.02
COL4A5-205ENST00000483338 ZNF18P17022 549 aa8.66□□□□□ -1.02
COL4A5-205ENST00000483338 GKAP1Q5VSY0 366 aaPredicted RBP8.66□□□□□ -1.02
COL4A5-205ENST00000483338 PAPD7Q5XG87 772 aaKnown RBP8.66□□□□□ -1.02
COL4A5-205ENST00000483338 OGFOD1Q8N543 542 aa8.66□□□□□ -1.02
COL4A5-205ENST00000483338 ZCRB1Q8TBF4 217 aaKnown RBP8.66□□□□□ -1.02
COL4A5-205ENST00000483338 CAVIN3Q969G5 261 aa8.66□□□□□ -1.02
COL4A5-205ENST00000483338 PHACTR3Q96KR7 559 aa8.66□□□□□ -1.02
COL4A5-205ENST00000483338 UBA5Q9GZZ9 404 aa8.66□□□□□ -1.02
COL4A5-205ENST00000483338 SLC12A6Q9UHW9 1150 aa8.66□□□□□ -1.02
COL4A5-205ENST00000483338 AGAP1Q9UPQ3 857 aa8.66□□□□□ -1.02
COL4A5-205ENST00000483338 LRRC42Q9Y546 428 aa8.66□□□□□ -1.02
COL4A5-205ENST00000483338 RBM8AQ9Y5S9 174 aaKnown RBP8.66□□□□□ -1.02
COL4A5-205ENST00000483338 TMEM131LA2VDJ0 1609 aa8.65□□□□□ -1.02
COL4A5-205ENST00000483338 PHF20L1A8MW92 1017 aa8.65□□□□□ -1.02
COL4A5-205ENST00000483338 F8W031 263 aaPredicted RBP8.65□□□□□ -1.02
COL4A5-205ENST00000483338 TEX33O43247 280 aa8.65□□□□□ -1.02
COL4A5-205ENST00000483338 PFDN1O60925 122 aa8.65□□□□□ -1.02
COL4A5-205ENST00000483338 GSTA1P08263 222 aa8.65□□□□□ -1.02
COL4A5-205ENST00000483338 RPS6KB1P23443 525 aa8.65□□□□□ -1.02
COL4A5-205ENST00000483338 NR1I3Q14994 352 aa8.65□□□□□ -1.02
COL4A5-205ENST00000483338 SLC4A8Q2Y0W8 1093 aa8.65□□□□□ -1.02
COL4A5-205ENST00000483338 CCDC92Q53HC0 331 aaPredicted RBP8.65□□□□□ -1.02
COL4A5-205ENST00000483338 USHBP1Q8N6Y0 703 aa8.65□□□□□ -1.02
COL4A5-205ENST00000483338 AIDAQ96BJ3 306 aa8.65□□□□□ -1.02
COL4A5-205ENST00000483338 CCDC43Q96MW1 224 aaKnown RBP8.65□□□□□ -1.02
COL4A5-205ENST00000483338 TRAPPC9Q96Q05 1148 aa8.65□□□□□ -1.02
COL4A5-205ENST00000483338 GUCA1BQ9UMX6 200 aa8.65□□□□□ -1.02
COL4A5-205ENST00000483338 THRAP3Q9Y2W1 955 aaKnown RBP8.65□□□□□ -1.02
COL4A5-205ENST00000483338 CCDC61Q9Y6R9 512 aa8.65□□□□□ -1.02
COL4A5-205ENST00000483338 KIAA1210Q9ULL0 1709 aa8.65□□□□□ -1.02
COL4A5-205ENST00000483338 CEP104O60308 925 aa8.65□□□□□ -1.02
COL4A5-205ENST00000483338 TMCC1O94876 653 aa8.65□□□□□ -1.02
COL4A5-205ENST00000483338 NQO1P15559 274 aaKnown RBP8.65□□□□□ -1.02
COL4A5-205ENST00000483338 TMOD1P28289 359 aa8.65□□□□□ -1.02
COL4A5-205ENST00000483338 ERVK-24P63145 666 aa8.65□□□□□ -1.02
COL4A5-205ENST00000483338 PHEXP78562 749 aa8.65□□□□□ -1.02
COL4A5-205ENST00000483338 CKAP4Q07065 602 aaKnown RBP8.65□□□□□ -1.02
COL4A5-205ENST00000483338 NAA16Q6N069 864 aaPredicted RBP8.65□□□□□ -1.02
COL4A5-205ENST00000483338 BLOC1S2Q6QNY1 142 aa8.65□□□□□ -1.02
COL4A5-205ENST00000483338 LMNTD2Q8IXW0 634 aa8.65□□□□□ -1.02
COL4A5-205ENST00000483338 CNTROBQ8N137 903 aa8.65□□□□□ -1.02
COL4A5-205ENST00000483338 ANKRD27Q96NW4 1050 aa8.65□□□□□ -1.02
COL4A5-205ENST00000483338 MOV10L1Q9BXT6 1211 aaKnown RBP8.65□□□□□ -1.02
COL4A5-205ENST00000483338 ADAM22Q9P0K1 906 aa8.65□□□□□ -1.02
COL4A5-205ENST00000483338 NEXMIFQ5QGS0 1516 aa8.65□□□□□ -1.02
COL4A5-205ENST00000483338 PNOCQ13519 176 aa8.65□□□□□ -1.03
COL4A5-205ENST00000483338 POSTNQ15063 836 aa8.65□□□□□ -1.03
COL4A5-205ENST00000483338 SYNE3Q6ZMZ3 975 aa8.65□□□□□ -1.03
COL4A5-205ENST00000483338 IQCF2Q8IXL9 164 aa8.65□□□□□ -1.03
COL4A5-205ENST00000483338 GBP7Q8N8V2 638 aaPredicted RBP8.65□□□□□ -1.03
COL4A5-205ENST00000483338 CAGE1Q8TC20 777 aa8.65□□□□□ -1.03
COL4A5-205ENST00000483338 JAKMIP2Q96AA8 810 aa8.65□□□□□ -1.03
COL4A5-205ENST00000483338 TRAIPQ9BWF2 469 aa8.65□□□□□ -1.03
COL4A5-205ENST00000483338 PAIP2BQ9ULR5 123 aaKnown RBP8.65□□□□□ -1.03
COL4A5-205ENST00000483338 CRYBG1Q9Y4K1 1723 aa8.64□□□□□ -1.03
COL4A5-205ENST00000483338 HMGB1P1B2RPK0 211 aaPredicted RBP8.64□□□□□ -1.03
COL4A5-205ENST00000483338 MFAP3LO75121 409 aa8.64□□□□□ -1.03
COL4A5-205ENST00000483338 FLOT1O75955 427 aa8.64□□□□□ -1.03
COL4A5-205ENST00000483338 BMP6P22004 513 aa8.64□□□□□ -1.03
COL4A5-205ENST00000483338 PSMA5P28066 241 aa8.64□□□□□ -1.03
COL4A5-205ENST00000483338 GSTT1P30711 240 aa8.64□□□□□ -1.03
COL4A5-205ENST00000483338 CFAP58Q5T655 872 aa8.64□□□□□ -1.03
COL4A5-205ENST00000483338 MEX3CQ5U5Q3 659 aaKnown RBP8.64□□□□□ -1.03
COL4A5-205ENST00000483338 SPTY2D1Q68D10 685 aaPredicted RBP8.64□□□□□ -1.03
COL4A5-205ENST00000483338 ZNF280DQ6N043 979 aa8.64□□□□□ -1.03
COL4A5-205ENST00000483338 APBB1IPQ7Z5R6 666 aaPredicted RBP8.64□□□□□ -1.03
COL4A5-205ENST00000483338 LONP2Q86WA8 852 aa8.64□□□□□ -1.03
COL4A5-205ENST00000483338 LINC00301Q8NCQ3 95 aa8.64□□□□□ -1.03
COL4A5-205ENST00000483338 KLHDC4Q8TBB5 520 aa8.64□□□□□ -1.03
COL4A5-205ENST00000483338 ALDH8A1Q9H2A2 487 aaPredicted RBP8.64□□□□□ -1.03
COL4A5-205ENST00000483338 GPCPD1Q9NPB8 672 aa8.64□□□□□ -1.03
COL4A5-205ENST00000483338 TRPV5Q9NQA5 729 aa8.64□□□□□ -1.03
COL4A5-205ENST00000483338 ZMYND8Q9ULU4 1186 aaPredicted RBP8.64□□□□□ -1.03
COL4A5-205ENST00000483338 ROBO2Q9HCK4 1378 aa8.64□□□□□ -1.03
COL4A5-205ENST00000483338 NEURL4Q96JN8 1562 aa8.64□□□□□ -1.03
COL4A5-205ENST00000483338 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.64□□□□□ -1.03
COL4A5-205ENST00000483338 GNAI2P04899 355 aa8.64□□□□□ -1.03
COL4A5-205ENST00000483338 PFKFB1P16118 471 aa8.64□□□□□ -1.03
COL4A5-205ENST00000483338 PCK1P35558 622 aa8.64□□□□□ -1.03
COL4A5-205ENST00000483338 OXCT1P55809 520 aa8.64□□□□□ -1.03
COL4A5-205ENST00000483338 NFE2L2Q16236 605 aa8.64□□□□□ -1.03
COL4A5-205ENST00000483338 IFI16Q16666 785 aaKnown RBP8.64□□□□□ -1.03
COL4A5-205ENST00000483338 KIAA0753Q2KHM9 967 aa8.64□□□□□ -1.03
COL4A5-205ENST00000483338 PALB2Q86YC2 1186 aa8.64□□□□□ -1.03
COL4A5-205ENST00000483338 CD302Q8IX05 232 aa8.64□□□□□ -1.03
COL4A5-205ENST00000483338 SMC1BQ8NDV3 1235 aa8.64□□□□□ -1.03
COL4A5-205ENST00000483338 NEK9Q8TD19 979 aa8.64□□□□□ -1.03
COL4A5-205ENST00000483338 RAPGEF5Q92565 580 aa8.64□□□□□ -1.03
COL4A5-205ENST00000483338 AZIN2Q96A70 460 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms