RNA–Protein interactions for RNA: ENST00000482902.5

SSR4-209, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-209ENST00000482902 SLC10A5Q5PT55 438 aa20.25■□□□□ 0.83
SSR4-209ENST00000482902 RCSD1Q6JBY9 416 aa20.25■□□□□ 0.83
SSR4-209ENST00000482902 SMIM5Q71RC9 77 aa20.25■□□□□ 0.83
SSR4-209ENST00000482902 PDS5AQ29RF7 1337 aaKnown RBP20.25■□□□□ 0.83
SSR4-209ENST00000482902 CHRM1P11229 460 aaPredicted RBP20.25■□□□□ 0.83
SSR4-209ENST00000482902 CALML3P27482 149 aa20.25■□□□□ 0.83
SSR4-209ENST00000482902 KCNQ4P56696 695 aa20.25■□□□□ 0.83
SSR4-209ENST00000482902 NCAPH2Q6IBW4 605 aa20.25■□□□□ 0.83
SSR4-209ENST00000482902 BLIDQ8IZY5 108 aa20.25■□□□□ 0.83
SSR4-209ENST00000482902 NELFBQ8WX92 580 aa20.25■□□□□ 0.83
SSR4-209ENST00000482902 VPS16Q9H269 839 aa20.25■□□□□ 0.83
SSR4-209ENST00000482902 MCM9Q9NXL9 1143 aa20.25■□□□□ 0.83
SSR4-209ENST00000482902 HPCAL4Q9UM19 191 aa20.25■□□□□ 0.83
SSR4-209ENST00000482902 JAG2Q9Y219 1238 aa20.25■□□□□ 0.83
SSR4-209ENST00000482902 LRRC10BA6NIK2 292 aa20.24■□□□□ 0.83
SSR4-209ENST00000482902 CDC25AP30304 524 aa20.24■□□□□ 0.83
SSR4-209ENST00000482902 SWT1Q5T5J6 900 aaKnown RBP20.24■□□□□ 0.83
SSR4-209ENST00000482902 ZNF658Q5TYW1 1059 aaPredicted RBP20.24■□□□□ 0.83
SSR4-209ENST00000482902 ARL6IP4Q66PJ3 421 aaKnown RBP20.24■□□□□ 0.83
SSR4-209ENST00000482902 MCTP2Q6DN12 878 aa20.24■□□□□ 0.83
SSR4-209ENST00000482902 KAT14Q9H8E8 782 aa20.24■□□□□ 0.83
SSR4-209ENST00000482902 TAB2Q9NYJ8 693 aa20.24■□□□□ 0.83
SSR4-209ENST00000482902 MYO6Q9UM54 1294 aa20.24■□□□□ 0.83
SSR4-209ENST00000482902 BAZ2BQ9UIF8 2168 aaKnown RBP20.24■□□□□ 0.83
SSR4-209ENST00000482902 RPN1P04843 607 aaKnown RBP20.24■□□□□ 0.83
SSR4-209ENST00000482902 LONP1P36776 959 aaKnown RBP20.24■□□□□ 0.83
SSR4-209ENST00000482902 COPB1P53618 953 aaKnown RBP20.24■□□□□ 0.83
SSR4-209ENST00000482902 SPAG1Q07617 926 aa20.24■□□□□ 0.83
SSR4-209ENST00000482902 C4orf32Q8N8J7 132 aa20.24■□□□□ 0.83
SSR4-209ENST00000482902 GPKOWQ92917 476 aaPredicted RBP eCLIP20.24■□□□□ 0.83
SSR4-209ENST00000482902 RMND1Q9NWS8 449 aa20.24■□□□□ 0.83
SSR4-209ENST00000482902 MYO1AQ9UBC5 1043 aa20.24■□□□□ 0.83
SSR4-209ENST00000482902 COL22A1Q8NFW1 1626 aaPredicted RBP20.23■□□□□ 0.83
SSR4-209ENST00000482902 MYH8P13535 1937 aa20.23■□□□□ 0.83
SSR4-209ENST00000482902 FAM205AQ6ZU69 1335 aa20.23■□□□□ 0.83
SSR4-209ENST00000482902 SHOX2O60902 331 aaPredicted RBP20.23■□□□□ 0.83
SSR4-209ENST00000482902 USP17L8P0C7I0 530 aa20.23■□□□□ 0.83
SSR4-209ENST00000482902 ERVK-24P63145 666 aa20.23■□□□□ 0.83
SSR4-209ENST00000482902 ANKRD20A12PQ8NF67 263 aa20.23■□□□□ 0.83
SSR4-209ENST00000482902 KCNJ18B7U540 433 aa20.23■□□□□ 0.83
SSR4-209ENST00000482902 TFAP4Q01664 338 aa20.23■□□□□ 0.83
SSR4-209ENST00000482902 KCNJ12Q14500 433 aa20.23■□□□□ 0.83
SSR4-209ENST00000482902 TCP11X2Q5H9J9 407 aa20.23■□□□□ 0.83
SSR4-209ENST00000482902 NLRP3Q96P20 1036 aa20.23■□□□□ 0.83
SSR4-209ENST00000482902 ANKRD2Q9GZV1 360 aa20.23■□□□□ 0.83
SSR4-209ENST00000482902 MAPK8IP1Q9UQF2 711 aa20.23■□□□□ 0.83
SSR4-209ENST00000482902 GDAQ9Y2T3 454 aa20.23■□□□□ 0.83
SSR4-209ENST00000482902 STAT6P42226 847 aa20.22■□□□□ 0.83
SSR4-209ENST00000482902 USP14P54578 494 aa20.22■□□□□ 0.83
SSR4-209ENST00000482902 TMTC1Q8IUR5 882 aa20.22■□□□□ 0.83
SSR4-209ENST00000482902 MICALL1Q8N3F8 863 aa20.22■□□□□ 0.83
SSR4-209ENST00000482902 RASGRP4Q8TDF6 673 aa20.22■□□□□ 0.83
SSR4-209ENST00000482902 KAT2BQ92831 832 aa20.22■□□□□ 0.83
SSR4-209ENST00000482902 ABHD10Q9NUJ1 306 aa20.22■□□□□ 0.83
SSR4-209ENST00000482902 PCDHA4Q9UN74 947 aa20.22■□□□□ 0.83
SSR4-209ENST00000482902 DZIP1Q86YF9 867 aaKnown RBP20.22■□□□□ 0.83
SSR4-209ENST00000482902 CCDC148Q8NFR7 591 aa20.22■□□□□ 0.83
SSR4-209ENST00000482902 RIN2Q8WYP3 895 aaPredicted RBP20.22■□□□□ 0.83
SSR4-209ENST00000482902 NUP88Q99567 741 aaPredicted RBP20.22■□□□□ 0.83
SSR4-209ENST00000482902 SPATA31A5Q5VU36 1347 aa20.21■□□□□ 0.83
SSR4-209ENST00000482902 SPATA31A7Q8IWB4 1347 aa20.21■□□□□ 0.83
SSR4-209ENST00000482902 RNF225M0QZC1 329 aaPredicted RBP20.21■□□□□ 0.83
SSR4-209ENST00000482902 PRCPP42785 496 aa20.21■□□□□ 0.83
SSR4-209ENST00000482902 TXNRD3Q86VQ6 643 aa20.21■□□□□ 0.83
SSR4-209ENST00000482902 STAG2Q8N3U4 1231 aa20.21■□□□□ 0.83
SSR4-209ENST00000482902 CCDC24Q8N4L8 307 aa20.21■□□□□ 0.83
SSR4-209ENST00000482902 PNMA1Q8ND90 353 aa20.21■□□□□ 0.83
SSR4-209ENST00000482902 FAM107BQ9H098 131 aa20.21■□□□□ 0.83
SSR4-209ENST00000482902 SH3GLB2Q9NR46 395 aa20.21■□□□□ 0.83
SSR4-209ENST00000482902 IL17RBQ9NRM6 502 aa20.21■□□□□ 0.83
SSR4-209ENST00000482902 MYH13Q9UKX3 1938 aa20.21■□□□□ 0.83
SSR4-209ENST00000482902 ROBO1Q9Y6N7 1651 aa20.21■□□□□ 0.83
SSR4-209ENST00000482902 DGKHQ86XP1 1220 aa20.2■□□□□ 0.82
SSR4-209ENST00000482902 COG1Q8WTW3 980 aa20.2■□□□□ 0.82
SSR4-209ENST00000482902 CEP89Q96ST8 783 aa20.2■□□□□ 0.82
SSR4-209ENST00000482902 NYXQ9GZU5 481 aa20.2■□□□□ 0.82
SSR4-209ENST00000482902 DISC1Q9NRI5 854 aa20.2■□□□□ 0.82
SSR4-209ENST00000482902 RNF216Q9NWF9 866 aaPredicted RBP20.2■□□□□ 0.82
SSR4-209ENST00000482902 CCDC194A0A1B0GVG4 234 aa20.19■□□□□ 0.82
SSR4-209ENST00000482902 TRIM14Q14142 442 aa20.19■□□□□ 0.82
SSR4-209ENST00000482902 TYW1BQ6NUM6 668 aa20.19■□□□□ 0.82
SSR4-209ENST00000482902 CYP26C1Q6V0L0 522 aa20.19■□□□□ 0.82
SSR4-209ENST00000482902 TRAPPC11Q7Z392 1133 aa20.19■□□□□ 0.82
SSR4-209ENST00000482902 NBPF5PQ86XG9 351 aaPredicted RBP20.19■□□□□ 0.82
SSR4-209ENST00000482902 DYNLL2Q96FJ2 89 aa20.19■□□□□ 0.82
SSR4-209ENST00000482902 C12orf60Q5U649 245 aa20.19■□□□□ 0.82
SSR4-209ENST00000482902 DTHD1Q6ZMT9 781 aa20.19■□□□□ 0.82
SSR4-209ENST00000482902 RASSF8Q8NHQ8 419 aa20.19■□□□□ 0.82
SSR4-209ENST00000482902 SETDB2Q96T68 719 aa20.19■□□□□ 0.82
SSR4-209ENST00000482902 LAMB1P07942 1786 aa20.19■□□□□ 0.82
SSR4-209ENST00000482902 UBXN1Q04323 297 aa20.18■□□□□ 0.82
SSR4-209ENST00000482902 STIM1Q13586 685 aa20.18■□□□□ 0.82
SSR4-209ENST00000482902 MAP9Q49MG5 647 aa20.18■□□□□ 0.82
SSR4-209ENST00000482902 SRP68Q9UHB9 627 aaKnown RBP20.18■□□□□ 0.82
SSR4-209ENST00000482902 AHDC1Q5TGY3 1603 aaPredicted RBP20.18■□□□□ 0.82
SSR4-209ENST00000482902 COL5A3P25940 1745 aaPredicted RBP20.18■□□□□ 0.82
SSR4-209ENST00000482902 KDM4FA0A1W2PPD8 638 aa20.18■□□□□ 0.82
SSR4-209ENST00000482902 PP2D1A8MPX8 630 aa20.18■□□□□ 0.82
SSR4-209ENST00000482902 H7C1D1 291 aa20.18■□□□□ 0.82
SSR4-209ENST00000482902 ERLIN2O94905 339 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms