RNA–Protein interactions for RNA: ENST00000482714.5

CCM2-215, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-215ENST00000482714 ZNF214Q9UL59 606 aaPredicted RBP17.77■□□□□ 0.44
CCM2-215ENST00000482714 ICAM1P05362 532 aa17.76■□□□□ 0.43
CCM2-215ENST00000482714 ERVK-9P63128 1117 aa17.76■□□□□ 0.43
CCM2-215ENST00000482714 ERVK-24P63145 666 aa17.76■□□□□ 0.43
CCM2-215ENST00000482714 TMEM132BQ14DG7 1078 aa17.76■□□□□ 0.43
CCM2-215ENST00000482714 RIOX2Q8IUF8 465 aa17.76■□□□□ 0.43
CCM2-215ENST00000482714 TEX2Q8IWB9 1127 aa17.76■□□□□ 0.43
CCM2-215ENST00000482714 FAM177A1Q8N128 213 aaPredicted RBP17.76■□□□□ 0.43
CCM2-215ENST00000482714 SHCBP1Q8NEM2 672 aa17.76■□□□□ 0.43
CCM2-215ENST00000482714 AMNQ9BXJ7 453 aa17.76■□□□□ 0.43
CCM2-215ENST00000482714 SEC63Q9UGP8 760 aaKnown RBP17.76■□□□□ 0.43
CCM2-215ENST00000482714 V9GY48 417 aaPredicted RBP17.76■□□□□ 0.43
CCM2-215ENST00000482714 hCG_1984214I3L0E3 225 aa17.75■□□□□ 0.43
CCM2-215ENST00000482714 CD2BP2O95400 341 aaKnown RBP17.75■□□□□ 0.43
CCM2-215ENST00000482714 SSRP1Q08945 709 aaKnown RBP17.75■□□□□ 0.43
CCM2-215ENST00000482714 POTEEQ6S8J3 1075 aa17.75■□□□□ 0.43
CCM2-215ENST00000482714 NOL8Q76FK4 1167 aaKnown RBP17.75■□□□□ 0.43
CCM2-215ENST00000482714 ZNF713Q8N859 430 aaPredicted RBP17.75■□□□□ 0.43
CCM2-215ENST00000482714 SPATC1LQ9H0A9 340 aa17.75■□□□□ 0.43
CCM2-215ENST00000482714 MROH8Q9H579 483 aa17.75■□□□□ 0.43
CCM2-215ENST00000482714 NCOA5Q9HCD5 579 aaKnown RBP17.75■□□□□ 0.43
CCM2-215ENST00000482714 BTBD7Q9P203 1132 aa17.75■□□□□ 0.43
CCM2-215ENST00000482714 RLFQ13129 1914 aa17.75■□□□□ 0.43
CCM2-215ENST00000482714 K7ELQ4 463 aaPredicted RBP17.75■□□□□ 0.43
CCM2-215ENST00000482714 TBC1D8O95759 1140 aa17.75■□□□□ 0.43
CCM2-215ENST00000482714 CDC37Q16543 378 aaPredicted RBP17.75■□□□□ 0.43
CCM2-215ENST00000482714 SLC35G1Q2M3R5 365 aa17.75■□□□□ 0.43
CCM2-215ENST00000482714 QRICH1Q2TAL8 776 aa17.75■□□□□ 0.43
CCM2-215ENST00000482714 Q3C1V9 767 aa17.75■□□□□ 0.43
CCM2-215ENST00000482714 SAMD1Q6SPF0 538 aaPredicted RBP17.75■□□□□ 0.43
CCM2-215ENST00000482714 FBXO11Q86XK2 927 aa17.75■□□□□ 0.43
CCM2-215ENST00000482714 HSCBQ8IWL3 235 aa17.75■□□□□ 0.43
CCM2-215ENST00000482714 CCDC82Q8N4S0 544 aa17.75■□□□□ 0.43
CCM2-215ENST00000482714 SAMD3Q8N6K7 520 aa17.75■□□□□ 0.43
CCM2-215ENST00000482714 ANKRD13CQ8N6S4 541 aa17.75■□□□□ 0.43
CCM2-215ENST00000482714 NECAB1Q8N987 351 aa17.75■□□□□ 0.43
CCM2-215ENST00000482714 CHST13Q8NET6 341 aa17.75■□□□□ 0.43
CCM2-215ENST00000482714 PIGSQ96S52 555 aa17.75■□□□□ 0.43
CCM2-215ENST00000482714 CPVLQ9H3G5 476 aa17.75■□□□□ 0.43
CCM2-215ENST00000482714 TXNRD2Q9NNW7 524 aa17.75■□□□□ 0.43
CCM2-215ENST00000482714 FBXO40Q9UH90 709 aa17.75■□□□□ 0.43
CCM2-215ENST00000482714 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.75■□□□□ 0.43
CCM2-215ENST00000482714 ZNF536O15090 1300 aa17.74■□□□□ 0.43
CCM2-215ENST00000482714 CNMDO75829 334 aa17.74■□□□□ 0.43
CCM2-215ENST00000482714 DEXIO95424 95 aa17.74■□□□□ 0.43
CCM2-215ENST00000482714 LARGE1O95461 756 aa17.74■□□□□ 0.43
CCM2-215ENST00000482714 FMNL1O95466 1100 aaPredicted RBP17.74■□□□□ 0.43
CCM2-215ENST00000482714 HMGN5P82970 282 aaKnown RBP17.74■□□□□ 0.43
CCM2-215ENST00000482714 CUL4AQ13619 759 aa17.74■□□□□ 0.43
CCM2-215ENST00000482714 ARHGEF6Q15052 776 aa17.74■□□□□ 0.43
CCM2-215ENST00000482714 CPXCR1Q8N123 301 aa17.74■□□□□ 0.43
CCM2-215ENST00000482714 CMTR1Q8N1G2 835 aaKnown RBP17.74■□□□□ 0.43
CCM2-215ENST00000482714 WASF1Q92558 559 aa17.74■□□□□ 0.43
CCM2-215ENST00000482714 INTS4Q96HW7 963 aaKnown RBP17.74■□□□□ 0.43
CCM2-215ENST00000482714 PAGR1Q9BTK6 254 aa17.74■□□□□ 0.43
CCM2-215ENST00000482714 MAP3K20Q9NYL2 800 aaKnown RBP17.74■□□□□ 0.43
CCM2-215ENST00000482714 CPA4Q9UI42 421 aa17.74■□□□□ 0.43
CCM2-215ENST00000482714 CNTNAP5Q8WYK1 1306 aa17.73■□□□□ 0.43
CCM2-215ENST00000482714 STK36Q9NRP7 1315 aa17.73■□□□□ 0.43
CCM2-215ENST00000482714 GPR25O00155 361 aa17.73■□□□□ 0.43
CCM2-215ENST00000482714 STRNO43815 780 aa17.73■□□□□ 0.43
CCM2-215ENST00000482714 MAPK4P31152 587 aa17.73■□□□□ 0.43
CCM2-215ENST00000482714 SP3Q02447 781 aa17.73■□□□□ 0.43
CCM2-215ENST00000482714 BECN1Q14457 450 aa17.73■□□□□ 0.43
CCM2-215ENST00000482714 PFKFB3Q16875 520 aaPredicted RBP17.73■□□□□ 0.43
CCM2-215ENST00000482714 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.73■□□□□ 0.43
CCM2-215ENST00000482714 RGS22Q8NE09 1264 aa17.73■□□□□ 0.43
CCM2-215ENST00000482714 RAVER2Q9HCJ3 691 aaKnown RBP17.73■□□□□ 0.43
CCM2-215ENST00000482714 MRPL11Q9Y3B7 192 aaKnown RBP17.73■□□□□ 0.43
CCM2-215ENST00000482714 ABCB11O95342 1321 aa17.73■□□□□ 0.43
CCM2-215ENST00000482714 CTDNEP1O95476 244 aa17.72■□□□□ 0.43
CCM2-215ENST00000482714 PLS1Q14651 629 aa17.72■□□□□ 0.43
CCM2-215ENST00000482714 HOMER1Q86YM7 354 aa17.72■□□□□ 0.43
CCM2-215ENST00000482714 CCDC83Q8IWF9 413 aa17.72■□□□□ 0.43
CCM2-215ENST00000482714 CCAR1Q8IX12 1150 aaKnown RBP17.72■□□□□ 0.43
CCM2-215ENST00000482714 NSUN7Q8NE18 718 aaKnown RBP17.72■□□□□ 0.43
CCM2-215ENST00000482714 SMARCC2Q8TAQ2 1214 aa17.72■□□□□ 0.43
CCM2-215ENST00000482714 SLC26A6Q9BXS9 759 aa17.72■□□□□ 0.43
CCM2-215ENST00000482714 MOV10L1Q9BXT6 1211 aaKnown RBP17.72■□□□□ 0.43
CCM2-215ENST00000482714 CCPG1Q9ULG6 757 aa17.72■□□□□ 0.43
CCM2-215ENST00000482714 PCDHA1Q9Y5I3 950 aa17.72■□□□□ 0.43
CCM2-215ENST00000482714 BAZ2BQ9UIF8 2168 aaKnown RBP17.72■□□□□ 0.43
CCM2-215ENST00000482714 PARP14Q460N5 1801 aa17.71■□□□□ 0.43
CCM2-215ENST00000482714 GNRH1P01148 92 aa17.71■□□□□ 0.43
CCM2-215ENST00000482714 KIF22Q14807 665 aa17.71■□□□□ 0.43
CCM2-215ENST00000482714 SNRNP48Q6IEG0 339 aaKnown RBP17.71■□□□□ 0.43
CCM2-215ENST00000482714 CCDC174Q6PII3 467 aa17.71■□□□□ 0.43
CCM2-215ENST00000482714 MCF2L2Q86YR7 1114 aa17.71■□□□□ 0.43
CCM2-215ENST00000482714 ABRAQ8N0Z2 381 aa17.71■□□□□ 0.43
CCM2-215ENST00000482714 CCDC12Q8WUD4 166 aaPredicted RBP17.71■□□□□ 0.43
CCM2-215ENST00000482714 PHKBQ93100 1093 aa17.71■□□□□ 0.43
CCM2-215ENST00000482714 AGBL1Q96MI9 1066 aa17.71■□□□□ 0.43
CCM2-215ENST00000482714 GLT8D2Q9H1C3 349 aa17.71■□□□□ 0.43
CCM2-215ENST00000482714 R3HDMLQ9H3Y0 253 aa17.71■□□□□ 0.43
CCM2-215ENST00000482714 SH3GLB2Q9NR46 395 aa17.71■□□□□ 0.43
CCM2-215ENST00000482714 KIF3AQ9Y496 699 aa17.71■□□□□ 0.43
CCM2-215ENST00000482714 FOXN1O15353 648 aa17.7■□□□□ 0.42
CCM2-215ENST00000482714 FKTNO75072 461 aa17.7■□□□□ 0.42
CCM2-215ENST00000482714 SCG2P13521 617 aa17.7■□□□□ 0.42
CCM2-215ENST00000482714 XBP1P17861 261 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms