RNA–Protein interactions for RNA: ENST00000478958.5

LRRFIP1-211, Transcript of LRR binding FLII interacting protein 1, humanhuman

TSL 1 (best)

Gene LRRFIP1, Length 2,869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-211ENST00000478958 RIN2Q8WYP3 895 aaPredicted RBP12.35□□□□□ -0.43
LRRFIP1-211ENST00000478958 KIF9Q9HAQ2 790 aa12.35□□□□□ -0.43
LRRFIP1-211ENST00000478958 MYO6Q9UM54 1294 aa12.35□□□□□ -0.43
LRRFIP1-211ENST00000478958 KCNJ18B7U540 433 aa12.35□□□□□ -0.43
LRRFIP1-211ENST00000478958 ADAMTS3O15072 1205 aa12.35□□□□□ -0.43
LRRFIP1-211ENST00000478958 ARHGAP25P42331 645 aa12.35□□□□□ -0.43
LRRFIP1-211ENST00000478958 KCNJ12Q14500 433 aa12.35□□□□□ -0.43
LRRFIP1-211ENST00000478958 CYP26C1Q6V0L0 522 aa12.35□□□□□ -0.43
LRRFIP1-211ENST00000478958 DZIP3Q86Y13 1208 aaKnown RBP12.35□□□□□ -0.43
LRRFIP1-211ENST00000478958 TMTC1Q8IUR5 882 aa12.35□□□□□ -0.43
LRRFIP1-211ENST00000478958 GSPT2Q8IYD1 628 aaKnown RBP12.35□□□□□ -0.43
LRRFIP1-211ENST00000478958 TMTC2Q8N394 836 aa12.35□□□□□ -0.43
LRRFIP1-211ENST00000478958 MTRQ99707 1265 aa12.35□□□□□ -0.43
LRRFIP1-211ENST00000478958 RNF41Q9H4P4 317 aaPredicted RBP12.35□□□□□ -0.43
LRRFIP1-211ENST00000478958 ATRNO75882 1429 aa12.34□□□□□ -0.43
LRRFIP1-211ENST00000478958 KCPQ6ZWJ8 1503 aa12.34□□□□□ -0.43
LRRFIP1-211ENST00000478958 MYO1FO00160 1098 aa12.34□□□□□ -0.43
LRRFIP1-211ENST00000478958 FGFR2P21802 821 aa12.34□□□□□ -0.43
LRRFIP1-211ENST00000478958 DYNLL1P63167 89 aaKnown RBP12.34□□□□□ -0.43
LRRFIP1-211ENST00000478958 PAK1Q13153 545 aa12.34□□□□□ -0.43
LRRFIP1-211ENST00000478958 CATIPQ7Z7H3 387 aa12.34□□□□□ -0.43
LRRFIP1-211ENST00000478958 RNF26Q9BY78 433 aaPredicted RBP12.34□□□□□ -0.43
LRRFIP1-211ENST00000478958 SKAP2O75563 359 aaPredicted RBP12.34□□□□□ -0.43
LRRFIP1-211ENST00000478958 RPS6KA3P51812 740 aa12.34□□□□□ -0.43
LRRFIP1-211ENST00000478958 NLRP5P59047 1200 aa12.34□□□□□ -0.43
LRRFIP1-211ENST00000478958 NAA25Q14CX7 972 aa12.34□□□□□ -0.43
LRRFIP1-211ENST00000478958 SH3RF1Q7Z6J0 888 aa12.34□□□□□ -0.43
LRRFIP1-211ENST00000478958 MSL3Q8N5Y2 521 aaKnown RBP12.34□□□□□ -0.43
LRRFIP1-211ENST00000478958 MSANTD4Q8NCY6 345 aa12.34□□□□□ -0.43
LRRFIP1-211ENST00000478958 HNRNPLLQ8WVV9 542 aaKnown RBP12.34□□□□□ -0.43
LRRFIP1-211ENST00000478958 SLC4A9Q96Q91 983 aa12.34□□□□□ -0.43
LRRFIP1-211ENST00000478958 PHF20Q9BVI0 1012 aa12.34□□□□□ -0.43
LRRFIP1-211ENST00000478958 RAB21Q9UL25 225 aa12.34□□□□□ -0.43
LRRFIP1-211ENST00000478958 EPN1Q9Y6I3 576 aaPredicted RBP12.34□□□□□ -0.43
LRRFIP1-211ENST00000478958 CDHR2Q9BYE9 1310 aa12.34□□□□□ -0.43
LRRFIP1-211ENST00000478958 TNS3Q68CZ2 1445 aa12.34□□□□□ -0.43
LRRFIP1-211ENST00000478958 TTC26A0AVF1 554 aa12.33□□□□□ -0.44
LRRFIP1-211ENST00000478958 POTEB2H3BUK9 544 aa12.33□□□□□ -0.44
LRRFIP1-211ENST00000478958 PIP4K2BP78356 416 aa12.33□□□□□ -0.44
LRRFIP1-211ENST00000478958 MRPS25P82663 173 aaKnown RBP12.33□□□□□ -0.44
LRRFIP1-211ENST00000478958 TCP11X2Q5H9J9 407 aa12.33□□□□□ -0.44
LRRFIP1-211ENST00000478958 FAM47AQ5JRC9 791 aa12.33□□□□□ -0.44
LRRFIP1-211ENST00000478958 RASGRP4Q8TDF6 673 aa12.33□□□□□ -0.44
LRRFIP1-211ENST00000478958 PARD3BQ8TEW8 1205 aa12.33□□□□□ -0.44
LRRFIP1-211ENST00000478958 ZSCAN10Q96SZ4 725 aaPredicted RBP12.33□□□□□ -0.44
LRRFIP1-211ENST00000478958 AKAP11Q9UKA4 1901 aa12.33□□□□□ -0.44
LRRFIP1-211ENST00000478958 PEX19P40855 299 aa12.33□□□□□ -0.44
LRRFIP1-211ENST00000478958 PRCPP42785 496 aa12.33□□□□□ -0.44
LRRFIP1-211ENST00000478958 GYG1P46976 350 aa12.33□□□□□ -0.44
LRRFIP1-211ENST00000478958 NKX1-1Q15270 411 aaPredicted RBP12.33□□□□□ -0.44
LRRFIP1-211ENST00000478958 CCDC122Q5T0U0 273 aa12.33□□□□□ -0.44
LRRFIP1-211ENST00000478958 FERMT2Q96AC1 680 aa12.33□□□□□ -0.44
LRRFIP1-211ENST00000478958 RABEP2Q9H5N1 569 aa12.33□□□□□ -0.44
LRRFIP1-211ENST00000478958 MST1RQ04912 1400 aa12.32□□□□□ -0.44
LRRFIP1-211ENST00000478958 MROH5Q6ZUA9 1318 aa12.32□□□□□ -0.44
LRRFIP1-211ENST00000478958 PP2D1A8MPX8 630 aa12.32□□□□□ -0.44
LRRFIP1-211ENST00000478958 NDUFA10O95299 355 aa12.32□□□□□ -0.44
LRRFIP1-211ENST00000478958 ATP1A1P05023 1023 aaKnown RBP12.32□□□□□ -0.44
LRRFIP1-211ENST00000478958 SEC23AQ15436 765 aa12.32□□□□□ -0.44
LRRFIP1-211ENST00000478958 ARMC3Q5W041 872 aa12.32□□□□□ -0.44
LRRFIP1-211ENST00000478958 RPUSD2Q8IZ73 545 aaKnown RBP12.32□□□□□ -0.44
LRRFIP1-211ENST00000478958 MMS19Q96T76 1030 aa12.32□□□□□ -0.44
LRRFIP1-211ENST00000478958 MAGEB6P1A0A0J9YX57 407 aa12.32□□□□□ -0.44
LRRFIP1-211ENST00000478958 GNAT2P19087 354 aa12.32□□□□□ -0.44
LRRFIP1-211ENST00000478958 USP5P45974 858 aa12.32□□□□□ -0.44
LRRFIP1-211ENST00000478958 WHAMMP3Q1A5X7 153 aa12.32□□□□□ -0.44
LRRFIP1-211ENST00000478958 WLSQ5T9L3 541 aa12.32□□□□□ -0.44
LRRFIP1-211ENST00000478958 TRIM74Q86UV6 250 aa12.32□□□□□ -0.44
LRRFIP1-211ENST00000478958 TRIM73Q86UV7 250 aa12.32□□□□□ -0.44
LRRFIP1-211ENST00000478958 CCDC148Q8NFR7 591 aa12.32□□□□□ -0.44
LRRFIP1-211ENST00000478958 ZBTB10Q96DT7 871 aa12.32□□□□□ -0.44
LRRFIP1-211ENST00000478958 PCMTD1Q96MG8 357 aaPredicted RBP12.32□□□□□ -0.44
LRRFIP1-211ENST00000478958 REXO2Q9Y3B8 237 aaKnown RBP12.32□□□□□ -0.44
LRRFIP1-211ENST00000478958 RNF40O75150 1001 aa12.32□□□□□ -0.44
LRRFIP1-211ENST00000478958 PMS1P54277 932 aaKnown RBP12.32□□□□□ -0.44
LRRFIP1-211ENST00000478958 PDCD2Q16342 344 aaPredicted RBP12.32□□□□□ -0.44
LRRFIP1-211ENST00000478958 IL17AQ16552 155 aa12.32□□□□□ -0.44
LRRFIP1-211ENST00000478958 TSR1Q2NL82 804 aaKnown RBP12.32□□□□□ -0.44
LRRFIP1-211ENST00000478958 FKBP15Q5T1M5 1219 aa12.32□□□□□ -0.44
LRRFIP1-211ENST00000478958 C1QTNF12Q5T7M4 302 aa12.32□□□□□ -0.44
LRRFIP1-211ENST00000478958 SUSD4Q5VX71 490 aa12.32□□□□□ -0.44
LRRFIP1-211ENST00000478958 ANKRD23Q86SG2 305 aa12.32□□□□□ -0.44
LRRFIP1-211ENST00000478958 KIAA1328Q86T90 577 aa12.32□□□□□ -0.44
LRRFIP1-211ENST00000478958 CADPS2Q86UW7 1296 aa12.32□□□□□ -0.44
LRRFIP1-211ENST00000478958 CAGE1Q8TC20 777 aa12.32□□□□□ -0.44
LRRFIP1-211ENST00000478958 LUC7L2Q9Y383 392 aaKnown RBP12.32□□□□□ -0.44
LRRFIP1-211ENST00000478958 NUP188Q5SRE5 1749 aa12.31□□□□□ -0.44
LRRFIP1-211ENST00000478958 MACROD2A1Z1Q3 448 aa12.31□□□□□ -0.44
LRRFIP1-211ENST00000478958 ZNF185O15231 689 aa12.31□□□□□ -0.44
LRRFIP1-211ENST00000478958 RPN1P04843 607 aaKnown RBP12.31□□□□□ -0.44
LRRFIP1-211ENST00000478958 SNX1Q13596 522 aa12.31□□□□□ -0.44
LRRFIP1-211ENST00000478958 CEP57Q86XR8 500 aa12.31□□□□□ -0.44
LRRFIP1-211ENST00000478958 KIRREL3Q8IZU9 778 aa12.31□□□□□ -0.44
LRRFIP1-211ENST00000478958 CCDC51Q96ER9 411 aa12.31□□□□□ -0.44
LRRFIP1-211ENST00000478958 JAG2Q9Y219 1238 aa12.31□□□□□ -0.44
LRRFIP1-211ENST00000478958 DUSP10Q9Y6W6 482 aa12.31□□□□□ -0.44
LRRFIP1-211ENST00000478958 SHTN1A0MZ66 631 aa12.31□□□□□ -0.44
LRRFIP1-211ENST00000478958 PARP1P09874 1014 aaKnown RBP12.31□□□□□ -0.44
LRRFIP1-211ENST00000478958 CYP19A1P11511 503 aaPredicted RBP12.31□□□□□ -0.44
LRRFIP1-211ENST00000478958 STAT6P42226 847 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms