RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 ZFYP08048 801 aaPredicted RBP5.59□□□□□ -1.52
CCDC39-204ENST00000476379 TTF1Q15361 905 aaPredicted RBP5.59□□□□□ -1.52
CCDC39-204ENST00000476379 PUM3Q15397 648 aaKnown RBP5.59□□□□□ -1.52
CCDC39-204ENST00000476379 LONRF2Q1L5Z9 754 aa5.59□□□□□ -1.52
CCDC39-204ENST00000476379 DPP8Q6V1X1 898 aaPredicted RBP5.59□□□□□ -1.52
CCDC39-204ENST00000476379 RRAGAQ7L523 313 aa5.59□□□□□ -1.52
CCDC39-204ENST00000476379 SPICE1Q8N0Z3 855 aa5.59□□□□□ -1.52
CCDC39-204ENST00000476379 LARGE2Q8N3Y3 721 aa5.59□□□□□ -1.52
CCDC39-204ENST00000476379 FEZ1Q99689 392 aa5.59□□□□□ -1.52
CCDC39-204ENST00000476379 KRT23Q9C075 422 aa5.59□□□□□ -1.52
CCDC39-204ENST00000476379 CWC15Q9P013 229 aaKnown RBP5.59□□□□□ -1.52
CCDC39-204ENST00000476379 PRUNE2Q8WUY3 3088 aa5.59□□□□□ -1.52
CCDC39-204ENST00000476379 POLRMTO00411 1230 aaKnown RBP5.58□□□□□ -1.52
CCDC39-204ENST00000476379 TRAF5O00463 557 aa5.58□□□□□ -1.52
CCDC39-204ENST00000476379 ARHGAP6O43182 974 aa5.58□□□□□ -1.52
CCDC39-204ENST00000476379 ABCB4P21439 1286 aa5.58□□□□□ -1.52
CCDC39-204ENST00000476379 EARS2Q5JPH6 523 aaKnown RBP5.58□□□□□ -1.52
CCDC39-204ENST00000476379 CEP57Q86XR8 500 aa5.58□□□□□ -1.52
CCDC39-204ENST00000476379 FOXP4Q8IVH2 680 aaPredicted RBP5.58□□□□□ -1.52
CCDC39-204ENST00000476379 CCDC155Q8N6L0 562 aa5.58□□□□□ -1.52
CCDC39-204ENST00000476379 TMEM87AQ8NBN3 555 aa5.58□□□□□ -1.52
CCDC39-204ENST00000476379 COA7Q96BR5 231 aa5.58□□□□□ -1.52
CCDC39-204ENST00000476379 ZNF274Q96GC6 653 aaPredicted RBP5.58□□□□□ -1.52
CCDC39-204ENST00000476379 ADAM33Q9BZ11 813 aa5.58□□□□□ -1.52
CCDC39-204ENST00000476379 CHORDC1Q9UHD1 332 aaPredicted RBP5.58□□□□□ -1.52
CCDC39-204ENST00000476379 SERPINA10Q9UK55 444 aa5.58□□□□□ -1.52
CCDC39-204ENST00000476379 PRDM4Q9UKN5 801 aa5.58□□□□□ -1.52
CCDC39-204ENST00000476379 CDH23Q9H251 3354 aa5.58□□□□□ -1.52
CCDC39-204ENST00000476379 MARF1Q9Y4F3 1742 aaKnown RBP5.58□□□□□ -1.52
CCDC39-204ENST00000476379 ASTN2O75129 1339 aaPredicted RBP5.58□□□□□ -1.52
CCDC39-204ENST00000476379 KIF2AO00139 706 aaPredicted RBP5.58□□□□□ -1.52
CCDC39-204ENST00000476379 MEIS1O00470 390 aa5.58□□□□□ -1.52
CCDC39-204ENST00000476379 ADD2P35612 726 aa5.58□□□□□ -1.52
CCDC39-204ENST00000476379 HTRA3P83110 453 aa5.58□□□□□ -1.52
CCDC39-204ENST00000476379 DTHD1Q6ZMT9 781 aa5.58□□□□□ -1.52
CCDC39-204ENST00000476379 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.58□□□□□ -1.52
CCDC39-204ENST00000476379 ISCA1Q9BUE6 129 aa5.58□□□□□ -1.52
CCDC39-204ENST00000476379 RNF41Q9H4P4 317 aaPredicted RBP5.58□□□□□ -1.52
CCDC39-204ENST00000476379 DDX41Q9UJV9 622 aaKnown RBP5.58□□□□□ -1.52
CCDC39-204ENST00000476379 DUSP10Q9Y6W6 482 aa5.58□□□□□ -1.52
CCDC39-204ENST00000476379 KIF24Q5T7B8 1368 aa5.58□□□□□ -1.52
CCDC39-204ENST00000476379 SFI1A8K8P3 1242 aa5.58□□□□□ -1.52
CCDC39-204ENST00000476379 KCNJ18B7U540 433 aa5.58□□□□□ -1.52
CCDC39-204ENST00000476379 DEXIO95424 95 aa5.58□□□□□ -1.52
CCDC39-204ENST00000476379 EGFRP00533 1210 aa5.58□□□□□ -1.52
CCDC39-204ENST00000476379 MYCP01106 439 aaPredicted RBP5.58□□□□□ -1.52
CCDC39-204ENST00000476379 VPS41P49754 854 aa5.58□□□□□ -1.52
CCDC39-204ENST00000476379 PAK1Q13153 545 aa5.58□□□□□ -1.52
CCDC39-204ENST00000476379 KCNJ12Q14500 433 aa5.58□□□□□ -1.52
CCDC39-204ENST00000476379 SYCP1Q15431 976 aa5.58□□□□□ -1.52
CCDC39-204ENST00000476379 SHROOM1Q2M3G4 852 aaPredicted RBP5.58□□□□□ -1.52
CCDC39-204ENST00000476379 NBPF9Q3BBW0 867 aa5.58□□□□□ -1.52
CCDC39-204ENST00000476379 CAPN12Q6ZSI9 719 aa5.58□□□□□ -1.52
CCDC39-204ENST00000476379 NBPF11Q86T75 865 aa5.58□□□□□ -1.52
CCDC39-204ENST00000476379 CDAN1Q8IWY9 1227 aa5.58□□□□□ -1.52
CCDC39-204ENST00000476379 STAG2Q8N3U4 1231 aa5.58□□□□□ -1.52
CCDC39-204ENST00000476379 IQUBQ8NA54 791 aa5.58□□□□□ -1.52
CCDC39-204ENST00000476379 SPAG5Q96R06 1193 aa5.58□□□□□ -1.52
CCDC39-204ENST00000476379 LLPHQ9BRT6 129 aaKnown RBP5.58□□□□□ -1.52
CCDC39-204ENST00000476379 ZC3H12CQ9C0D7 883 aaKnown RBP5.58□□□□□ -1.52
CCDC39-204ENST00000476379 PCDH10Q9P2E7 1040 aa5.58□□□□□ -1.52
CCDC39-204ENST00000476379 MINPP1Q9UNW1 487 aa5.58□□□□□ -1.52
CCDC39-204ENST00000476379 TAF1P21675 1872 aa5.58□□□□□ -1.52
CCDC39-204ENST00000476379 H7C1W4 665 aa5.58□□□□□ -1.52
CCDC39-204ENST00000476379 SH2B2O14492 632 aaPredicted RBP5.58□□□□□ -1.52
CCDC39-204ENST00000476379 FTCDO95954 541 aa5.58□□□□□ -1.52
CCDC39-204ENST00000476379 FXR1P51114 621 aaKnown RBP eCLIP5.58□□□□□ -1.52
CCDC39-204ENST00000476379 RILPL1Q5EBL4 403 aa5.58□□□□□ -1.52
CCDC39-204ENST00000476379 PAXIP1Q6ZW49 1069 aaPredicted RBP5.58□□□□□ -1.52
CCDC39-204ENST00000476379 ZNF34Q8IZ26 560 aa5.58□□□□□ -1.52
CCDC39-204ENST00000476379 ELMO3Q96BJ8 720 aa5.58□□□□□ -1.52
CCDC39-204ENST00000476379 PAIP2Q9BPZ3 127 aaKnown RBP5.58□□□□□ -1.52
CCDC39-204ENST00000476379 DNAJC17Q9NVM6 304 aaKnown RBP5.58□□□□□ -1.52
CCDC39-204ENST00000476379 POLLQ9UGP5 575 aa5.58□□□□□ -1.52
CCDC39-204ENST00000476379 HPS5Q9UPZ3 1129 aa5.58□□□□□ -1.52
CCDC39-204ENST00000476379 AHDC1Q5TGY3 1603 aaPredicted RBP5.57□□□□□ -1.52
CCDC39-204ENST00000476379 WNT7AO00755 349 aa5.57□□□□□ -1.52
CCDC39-204ENST00000476379 PSMA7O14818 248 aa5.57□□□□□ -1.52
CCDC39-204ENST00000476379 ONECUT3O60422 494 aaPredicted RBP5.57□□□□□ -1.52
CCDC39-204ENST00000476379 CUTAO60888 179 aa5.57□□□□□ -1.52
CCDC39-204ENST00000476379 ERFP50548 548 aa5.57□□□□□ -1.52
CCDC39-204ENST00000476379 APBA1Q02410 837 aa5.57□□□□□ -1.52
CCDC39-204ENST00000476379 KIF5AQ12840 1032 aa5.57□□□□□ -1.52
CCDC39-204ENST00000476379 MORC3Q14149 939 aa5.57□□□□□ -1.52
CCDC39-204ENST00000476379 FOXR1Q6PIV2 292 aa5.57□□□□□ -1.52
CCDC39-204ENST00000476379 MIGA2Q7L4E1 593 aa5.57□□□□□ -1.52
CCDC39-204ENST00000476379 NOA1Q8NC60 698 aaKnown RBP5.57□□□□□ -1.52
CCDC39-204ENST00000476379 TTC16Q8NEE8 873 aa5.57□□□□□ -1.52
CCDC39-204ENST00000476379 SPIRE2Q8WWL2 714 aa5.57□□□□□ -1.52
CCDC39-204ENST00000476379 JAKMIP2Q96AA8 810 aa5.57□□□□□ -1.52
CCDC39-204ENST00000476379 NAPGQ99747 312 aaPredicted RBP5.57□□□□□ -1.52
CCDC39-204ENST00000476379 ACBD3Q9H3P7 528 aa5.57□□□□□ -1.52
CCDC39-204ENST00000476379 FAM204AQ9H8W3 233 aa5.57□□□□□ -1.52
CCDC39-204ENST00000476379 EPB41L4AQ9HCS5 686 aaPredicted RBP5.57□□□□□ -1.52
CCDC39-204ENST00000476379 PPANQ9NQ55 473 aaKnown RBP5.57□□□□□ -1.52
CCDC39-204ENST00000476379 MYH14Q7Z406 1995 aaKnown RBP5.57□□□□□ -1.52
CCDC39-204ENST00000476379 ZMYM6O95789 1325 aa5.57□□□□□ -1.52
CCDC39-204ENST00000476379 UQCRFS1P1P0C7P4 283 aa5.57□□□□□ -1.52
CCDC39-204ENST00000476379 ARID4AP29374 1257 aaPredicted RBP5.57□□□□□ -1.52
CCDC39-204ENST00000476379 RFX5P48382 616 aaPredicted RBP5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms