RNA–Protein interactions for RNA: ENST00000473480.5

A1CF-209, Transcript of APOBEC1 complementation factor, humanhuman

TSL 3

Gene A1CF, Length 813 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-209ENST00000473480 TMEM87AQ8NBN3 555 aa10.08□□□□□ -0.8
A1CF-209ENST00000473480 FOXQ1Q9C009 403 aa10.08□□□□□ -0.8
A1CF-209ENST00000473480 CD2APQ9Y5K6 639 aa10.08□□□□□ -0.8
A1CF-209ENST00000473480 FAM221AA4D161 298 aa10.07□□□□□ -0.8
A1CF-209ENST00000473480 CCDC85CA6NKD9 419 aa10.07□□□□□ -0.8
A1CF-209ENST00000473480 F13A1P00488 732 aa10.07□□□□□ -0.8
A1CF-209ENST00000473480 PRNPP04156 253 aa10.07□□□□□ -0.8
A1CF-209ENST00000473480 FAM50AQ14320 339 aaKnown RBP10.07□□□□□ -0.8
A1CF-209ENST00000473480 ZNF827Q17R98 1081 aa10.07□□□□□ -0.8
A1CF-209ENST00000473480 MKNK2Q9HBH9 465 aa10.07□□□□□ -0.8
A1CF-209ENST00000473480 GTF2IRD1Q9UHL9 959 aa10.07□□□□□ -0.8
A1CF-209ENST00000473480 GGT7Q9UJ14 662 aa10.07□□□□□ -0.8
A1CF-209ENST00000473480 ANGEL1Q9UNK9 670 aaKnown RBP10.07□□□□□ -0.8
A1CF-209ENST00000473480 GPRASP1Q5JY77 1395 aa10.06□□□□□ -0.8
A1CF-209ENST00000473480 FOXN1O15353 648 aa10.06□□□□□ -0.8
A1CF-209ENST00000473480 PGRP06401 933 aa10.06□□□□□ -0.8
A1CF-209ENST00000473480 ZC3H6P61129 1189 aaKnown RBP10.06□□□□□ -0.8
A1CF-209ENST00000473480 FAM160A1Q05DH4 1040 aa10.06□□□□□ -0.8
A1CF-209ENST00000473480 NKG7Q16617 165 aa10.06□□□□□ -0.8
A1CF-209ENST00000473480 ARHGAP27Q6ZUM4 889 aa10.06□□□□□ -0.8
A1CF-209ENST00000473480 MFSD2AQ8NA29 543 aa10.06□□□□□ -0.8
A1CF-209ENST00000473480 GOLM1Q8NBJ4 401 aa10.06□□□□□ -0.8
A1CF-209ENST00000473480 COPRSQ9NQ92 184 aa10.06□□□□□ -0.8
A1CF-209ENST00000473480 BCL9O00512 1426 aa10.06□□□□□ -0.8
A1CF-209ENST00000473480 ALS2Q96Q42 1657 aa10.06□□□□□ -0.8
A1CF-209ENST00000473480 CTCFP49711 727 aaPredicted RBP10.05□□□□□ -0.8
A1CF-209ENST00000473480 VSIG10LQ86VR7 867 aa10.05□□□□□ -0.8
A1CF-209ENST00000473480 FAM181AQ8N9Y4 354 aa10.05□□□□□ -0.8
A1CF-209ENST00000473480 SMC1BQ8NDV3 1235 aa10.05□□□□□ -0.8
A1CF-209ENST00000473480 NETO1Q8TDF5 533 aa10.05□□□□□ -0.8
A1CF-209ENST00000473480 BACH2Q9BYV9 841 aa10.05□□□□□ -0.8
A1CF-209ENST00000473480 STK26Q9P289 416 aa10.05□□□□□ -0.8
A1CF-209ENST00000473480 CCDC39Q9UFE4 941 aa10.05□□□□□ -0.8
A1CF-209ENST00000473480 ADAM30Q9UKF2 790 aa10.05□□□□□ -0.8
A1CF-209ENST00000473480 PAPPAQ13219 1627 aa10.04□□□□□ -0.8
A1CF-209ENST00000473480 IGF2BP3O00425 579 aaKnown RBP eCLIP10.04□□□□□ -0.8
A1CF-209ENST00000473480 ADAMTS4O75173 837 aa10.04□□□□□ -0.8
A1CF-209ENST00000473480 GP2P55259 537 aaKnown RBP10.04□□□□□ -0.8
A1CF-209ENST00000473480 LDLRAD1Q5T700 205 aa10.04□□□□□ -0.8
A1CF-209ENST00000473480 MRPL41Q8IXM3 137 aaKnown RBP10.04□□□□□ -0.8
A1CF-209ENST00000473480 TRPM3Q9HCF6 1732 aaPredicted RBP10.04□□□□□ -0.8
A1CF-209ENST00000473480 PNPLA7Q6ZV29 1317 aa10.04□□□□□ -0.8
A1CF-209ENST00000473480 CST3P01034 146 aaPredicted RBP10.03□□□□□ -0.8
A1CF-209ENST00000473480 EIF4A3P38919 411 aaKnown RBP10.03□□□□□ -0.8
A1CF-209ENST00000473480 OXCT1P55809 520 aa10.03□□□□□ -0.8
A1CF-209ENST00000473480 MPP2Q14168 576 aa10.03□□□□□ -0.8
A1CF-209ENST00000473480 PDE4DIPQ5VU43 2346 aa10.03□□□□□ -0.8
A1CF-209ENST00000473480 PRAMEF13Q5VWM6 474 aa10.03□□□□□ -0.8
A1CF-209ENST00000473480 FAM214BQ7L5A3 538 aa10.03□□□□□ -0.8
A1CF-209ENST00000473480 PLD6Q8N2A8 252 aaKnown RBP10.03□□□□□ -0.8
A1CF-209ENST00000473480 MARCH10Q8NA82 808 aaPredicted RBP10.03□□□□□ -0.8
A1CF-209ENST00000473480 HEXIM2Q96MH2 286 aaKnown RBP10.03□□□□□ -0.8
A1CF-209ENST00000473480 KCNQ5Q9NR82 932 aa10.03□□□□□ -0.8
A1CF-209ENST00000473480 TFCP2L1Q9NZI6 479 aa10.03□□□□□ -0.8
A1CF-209ENST00000473480 TJP2Q9UDY2 1190 aa10.03□□□□□ -0.8
A1CF-209ENST00000473480 CRYBG1Q9Y4K1 1723 aa10.03□□□□□ -0.8
A1CF-209ENST00000473480 QSER1Q2KHR3 1735 aa10.02□□□□□ -0.8
A1CF-209ENST00000473480 SLITRK5O94991 958 aa10.02□□□□□ -0.81
A1CF-209ENST00000473480 EOMESO95936 686 aa10.02□□□□□ -0.81
A1CF-209ENST00000473480 GARTP22102 1010 aa10.02□□□□□ -0.81
A1CF-209ENST00000473480 IFI16Q16666 785 aaKnown RBP10.02□□□□□ -0.81
A1CF-209ENST00000473480 SLC6A19Q695T7 634 aa10.02□□□□□ -0.81
A1CF-209ENST00000473480 STK11IPQ8N1F8 1099 aa10.02□□□□□ -0.81
A1CF-209ENST00000473480 MISP3Q96FF7 219 aa10.02□□□□□ -0.81
A1CF-209ENST00000473480 TMEM87BQ96K49 555 aa10.02□□□□□ -0.81
A1CF-209ENST00000473480 MIPEPQ99797 713 aa10.02□□□□□ -0.81
A1CF-209ENST00000473480 PRDM5Q9NQX1 630 aaPredicted RBP10.02□□□□□ -0.81
A1CF-209ENST00000473480 SUPT16HQ9Y5B9 1047 aaKnown RBP10.02□□□□□ -0.81
A1CF-209ENST00000473480 CLTCL1P53675 1640 aa10.02□□□□□ -0.81
A1CF-209ENST00000473480 CEACAM5P06731 702 aa10.01□□□□□ -0.81
A1CF-209ENST00000473480 VAMP1P23763 118 aa10.01□□□□□ -0.81
A1CF-209ENST00000473480 ZNF76P36508 570 aa10.01□□□□□ -0.81
A1CF-209ENST00000473480 FBXL19Q6PCT2 694 aa10.01□□□□□ -0.81
A1CF-209ENST00000473480 MCATQ8IVS2 390 aaKnown RBP10.01□□□□□ -0.81
A1CF-209ENST00000473480 FBXL18Q96ME1 805 aa10.01□□□□□ -0.81
A1CF-209ENST00000473480 MAPK8IP1Q9UQF2 711 aa10.01□□□□□ -0.81
A1CF-209ENST00000473480 TNRC18O15417 2968 aaPredicted RBP10.01□□□□□ -0.81
A1CF-209ENST00000473480 NUP155O75694 1391 aa10.01□□□□□ -0.81
A1CF-209ENST00000473480 ANKRD30BQ9BXX2 1392 aa10.01□□□□□ -0.81
A1CF-209ENST00000473480 PLEKHH1Q9ULM0 1364 aa10.01□□□□□ -0.81
A1CF-209ENST00000473480 LRRC37A3O60309 1634 aa10□□□□□ -0.81
A1CF-209ENST00000473480 IFT172Q9UG01 1749 aa10□□□□□ -0.81
A1CF-209ENST00000473480 PLCG1P19174 1290 aa10□□□□□ -0.81
A1CF-209ENST00000473480 ZNF746Q6NUN9 644 aaPredicted RBP10□□□□□ -0.81
A1CF-209ENST00000473480 LETMD1Q6P1Q0 360 aa10□□□□□ -0.81
A1CF-209ENST00000473480 ACSF2Q96CM8 615 aaPredicted RBP10□□□□□ -0.81
A1CF-209ENST00000473480 METTL5Q9NRN9 209 aaKnown RBP10□□□□□ -0.81
A1CF-209ENST00000473480 TPX2Q9ULW0 747 aaKnown RBP10□□□□□ -0.81
A1CF-209ENST00000473480 CORINQ9Y5Q5 1042 aa10□□□□□ -0.81
A1CF-209ENST00000473480 U3KQE9 123 aa10□□□□□ -0.81
A1CF-209ENST00000473480 AKAP12Q02952 1782 aa10□□□□□ -0.81
A1CF-209ENST00000473480 PRR36Q9H6K5 1346 aa10□□□□□ -0.81
A1CF-209ENST00000473480 BRD4O60885 1362 aaPredicted RBP10□□□□□ -0.81
A1CF-209ENST00000473480 PHRF1Q9P1Y6 1649 aaKnown RBP10□□□□□ -0.81
A1CF-209ENST00000473480 GNAT3A8MTJ3 354 aa9.99□□□□□ -0.81
A1CF-209ENST00000473480 ITIH2P19823 946 aa9.99□□□□□ -0.81
A1CF-209ENST00000473480 LBX1P52954 281 aa9.99□□□□□ -0.81
A1CF-209ENST00000473480 CWF19L2Q2TBE0 894 aaKnown RBP9.99□□□□□ -0.81
A1CF-209ENST00000473480 TMEM201Q5SNT2 666 aa9.99□□□□□ -0.81
A1CF-209ENST00000473480 REC114Q7Z4M0 266 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms