RNA–Protein interactions for RNA: ENST00000472103.5

SMARCD3-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 5

Gene SMARCD3, Length 798 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-207ENST00000472103 GCLCP48506 637 aaPredicted RBP17.02■□□□□ 0.32
SMARCD3-207ENST00000472103 GNAQP50148 359 aa17.02■□□□□ 0.32
SMARCD3-207ENST00000472103 ERVK-9P63128 1117 aa17.02■□□□□ 0.32
SMARCD3-207ENST00000472103 ERVK-24P63145 666 aa17.02■□□□□ 0.32
SMARCD3-207ENST00000472103 QRICH1Q2TAL8 776 aa17.02■□□□□ 0.32
SMARCD3-207ENST00000472103 HOMER1Q86YM7 354 aa17.02■□□□□ 0.32
SMARCD3-207ENST00000472103 GTF3C6Q969F1 213 aa17.02■□□□□ 0.32
SMARCD3-207ENST00000472103 AGBL1Q96MI9 1066 aa17.02■□□□□ 0.32
SMARCD3-207ENST00000472103 SPZ1Q9BXG8 430 aa17.02■□□□□ 0.32
SMARCD3-207ENST00000472103 RIPK3Q9Y572 518 aa17.02■□□□□ 0.32
SMARCD3-207ENST00000472103 FOXN1O15353 648 aa17.01■□□□□ 0.31
SMARCD3-207ENST00000472103 ZBED4O75132 1171 aa17.01■□□□□ 0.31
SMARCD3-207ENST00000472103 HSPA1AP0DMV8 641 aaKnown RBP17.01■□□□□ 0.31
SMARCD3-207ENST00000472103 HSPA1BP0DMV9 641 aaKnown RBP17.01■□□□□ 0.31
SMARCD3-207ENST00000472103 FAM110CQ1W6H9 321 aa17.01■□□□□ 0.31
SMARCD3-207ENST00000472103 CCDC83Q8IWF9 413 aa17.01■□□□□ 0.31
SMARCD3-207ENST00000472103 PHKBQ93100 1093 aa17.01■□□□□ 0.31
SMARCD3-207ENST00000472103 TMX3Q96JJ7 454 aa17.01■□□□□ 0.31
SMARCD3-207ENST00000472103 MOV10L1Q9BXT6 1211 aaKnown RBP17.01■□□□□ 0.31
SMARCD3-207ENST00000472103 SPATC1LQ9H0A9 340 aa17.01■□□□□ 0.31
SMARCD3-207ENST00000472103 PORCNQ9H237 461 aa17.01■□□□□ 0.31
SMARCD3-207ENST00000472103 GPR25O00155 361 aa17■□□□□ 0.31
SMARCD3-207ENST00000472103 SMARCA1P28370 1054 aa17■□□□□ 0.31
SMARCD3-207ENST00000472103 SLC4A3P48751 1232 aa17■□□□□ 0.31
SMARCD3-207ENST00000472103 PLS1Q14651 629 aa17■□□□□ 0.31
SMARCD3-207ENST00000472103 MB21D1Q8N884 522 aa17■□□□□ 0.31
SMARCD3-207ENST00000472103 GPRC5AQ8NFJ5 357 aa17■□□□□ 0.31
SMARCD3-207ENST00000472103 GTF3C2Q8WUA4 911 aaPredicted RBP17■□□□□ 0.31
SMARCD3-207ENST00000472103 ZSCAN31Q96LW9 406 aaPredicted RBP17■□□□□ 0.31
SMARCD3-207ENST00000472103 LZTS2Q9BRK4 669 aa17■□□□□ 0.31
SMARCD3-207ENST00000472103 BEGAINQ9BUH8 593 aa17■□□□□ 0.31
SMARCD3-207ENST00000472103 ARHGAP39Q9C0H5 1083 aa17■□□□□ 0.31
SMARCD3-207ENST00000472103 EFCC1Q9HA90 598 aa17■□□□□ 0.31
SMARCD3-207ENST00000472103 MGAMO43451 1857 aa16.99■□□□□ 0.31
SMARCD3-207ENST00000472103 ATP2A1O14983 1001 aa16.99■□□□□ 0.31
SMARCD3-207ENST00000472103 ZBTB5O15062 677 aa16.99■□□□□ 0.31
SMARCD3-207ENST00000472103 FDX1P10109 184 aa16.99■□□□□ 0.31
SMARCD3-207ENST00000472103 HSPA8P11142 646 aaKnown RBP16.99■□□□□ 0.31
SMARCD3-207ENST00000472103 IFNAR1P17181 557 aa16.99■□□□□ 0.31
SMARCD3-207ENST00000472103 STAT3P40763 770 aa16.99■□□□□ 0.31
SMARCD3-207ENST00000472103 PPP2R5BQ15173 497 aa16.99■□□□□ 0.31
SMARCD3-207ENST00000472103 PKN1Q16512 942 aa16.99■□□□□ 0.31
SMARCD3-207ENST00000472103 SNRNP48Q6IEG0 339 aaKnown RBP16.99■□□□□ 0.31
SMARCD3-207ENST00000472103 V9GY48 417 aaPredicted RBP16.99■□□□□ 0.31
SMARCD3-207ENST00000472103 DOCK3Q8IZD9 2030 aa16.99■□□□□ 0.31
SMARCD3-207ENST00000472103 CEP350Q5VT06 3117 aa16.98■□□□□ 0.31
SMARCD3-207ENST00000472103 CCDC196A0A1B0GTZ2 297 aa16.98■□□□□ 0.31
SMARCD3-207ENST00000472103 JAK2O60674 1132 aa16.98■□□□□ 0.31
SMARCD3-207ENST00000472103 ICAM1P05362 532 aa16.98■□□□□ 0.31
SMARCD3-207ENST00000472103 USH1GQ495M9 461 aa16.98■□□□□ 0.31
SMARCD3-207ENST00000472103 MUM1L1Q5H9M0 696 aa16.98■□□□□ 0.31
SMARCD3-207ENST00000472103 RIOX2Q8IUF8 465 aa16.98■□□□□ 0.31
SMARCD3-207ENST00000472103 NSUN7Q8NE18 718 aaKnown RBP16.98■□□□□ 0.31
SMARCD3-207ENST00000472103 ZNF296Q8WUU4 475 aaPredicted RBP16.98■□□□□ 0.31
SMARCD3-207ENST00000472103 SNX21Q969T3 373 aa16.98■□□□□ 0.31
SMARCD3-207ENST00000472103 COA7Q96BR5 231 aa16.98■□□□□ 0.31
SMARCD3-207ENST00000472103 SHISA4Q96DD7 197 aa16.98■□□□□ 0.31
SMARCD3-207ENST00000472103 SLC26A6Q9BXS9 759 aa16.98■□□□□ 0.31
SMARCD3-207ENST00000472103 SH2B1Q9NRF2 756 aaPredicted RBP16.98■□□□□ 0.31
SMARCD3-207ENST00000472103 CTDP1Q9Y5B0 961 aaPredicted RBP16.98■□□□□ 0.31
SMARCD3-207ENST00000472103 PNMA6FA0A0J9YX94 578 aa16.97■□□□□ 0.31
SMARCD3-207ENST00000472103 PRPF3O43395 683 aaKnown RBP16.97■□□□□ 0.31
SMARCD3-207ENST00000472103 ALAS1P13196 640 aa16.97■□□□□ 0.31
SMARCD3-207ENST00000472103 ERCC3P19447 782 aa16.97■□□□□ 0.31
SMARCD3-207ENST00000472103 MCM2P49736 904 aa16.97■□□□□ 0.31
SMARCD3-207ENST00000472103 OAZ1P54368 228 aa16.97■□□□□ 0.31
SMARCD3-207ENST00000472103 SP3Q02447 781 aa16.97■□□□□ 0.31
SMARCD3-207ENST00000472103 FBXO11Q86XK2 927 aa16.97■□□□□ 0.31
SMARCD3-207ENST00000472103 IL27Q8NEV9 243 aa16.97■□□□□ 0.31
SMARCD3-207ENST00000472103 CD99L2Q8TCZ2 262 aa16.97■□□□□ 0.31
SMARCD3-207ENST00000472103 GPKOWQ92917 476 aaPredicted RBP eCLIP16.97■□□□□ 0.31
SMARCD3-207ENST00000472103 RRP36Q96EU6 259 aaKnown RBP16.97■□□□□ 0.31
SMARCD3-207ENST00000472103 AIFM3Q96NN9 605 aa16.97■□□□□ 0.31
SMARCD3-207ENST00000472103 TEX13BQ9BXU2 312 aa16.97■□□□□ 0.31
SMARCD3-207ENST00000472103 CCPG1Q9ULG6 757 aa16.97■□□□□ 0.31
SMARCD3-207ENST00000472103 CASP8AP2Q9UKL3 1982 aa16.97■□□□□ 0.31
SMARCD3-207ENST00000472103 PLXNB2O15031 1838 aa16.96■□□□□ 0.31
SMARCD3-207ENST00000472103 CPLX1O14810 134 aa16.96■□□□□ 0.31
SMARCD3-207ENST00000472103 FMNL1O95466 1100 aaPredicted RBP16.96■□□□□ 0.31
SMARCD3-207ENST00000472103 FDPSP14324 419 aaKnown RBP16.96■□□□□ 0.31
SMARCD3-207ENST00000472103 LACTBP83111 547 aaPredicted RBP16.96■□□□□ 0.31
SMARCD3-207ENST00000472103 TYW1BQ6NUM6 668 aa16.96■□□□□ 0.31
SMARCD3-207ENST00000472103 NCAPG2Q86XI2 1143 aa16.96■□□□□ 0.31
SMARCD3-207ENST00000472103 CLEC4DQ8WXI8 215 aa16.96■□□□□ 0.31
SMARCD3-207ENST00000472103 RNF26Q9BY78 433 aaPredicted RBP16.96■□□□□ 0.31
SMARCD3-207ENST00000472103 HOMER2Q9NSB8 354 aa16.96■□□□□ 0.31
SMARCD3-207ENST00000472103 PTPDC1A2A3K4 754 aa16.95■□□□□ 0.3
SMARCD3-207ENST00000472103 OPLAHO14841 1288 aa16.95■□□□□ 0.3
SMARCD3-207ENST00000472103 FKTNO75072 461 aa16.95■□□□□ 0.3
SMARCD3-207ENST00000472103 SSRP1Q08945 709 aaKnown RBP16.95■□□□□ 0.3
SMARCD3-207ENST00000472103 NOM1Q5C9Z4 860 aaKnown RBP16.95■□□□□ 0.3
SMARCD3-207ENST00000472103 WWC2Q6AWC2 1192 aa16.95■□□□□ 0.3
SMARCD3-207ENST00000472103 SHCBP1Q8NEM2 672 aa16.95■□□□□ 0.3
SMARCD3-207ENST00000472103 TBC1D5Q92609 795 aa16.95■□□□□ 0.3
SMARCD3-207ENST00000472103 DDX11Q96FC9 970 aa16.95■□□□□ 0.3
SMARCD3-207ENST00000472103 TRERF1Q96PN7 1200 aa16.95■□□□□ 0.3
SMARCD3-207ENST00000472103 AMNQ9BXJ7 453 aa16.95■□□□□ 0.3
SMARCD3-207ENST00000472103 RNF146Q9NTX7 359 aa16.95■□□□□ 0.3
SMARCD3-207ENST00000472103 ZNFX1Q9P2E3 1918 aaKnown RBP16.94■□□□□ 0.3
SMARCD3-207ENST00000472103 K7ELQ4 463 aaPredicted RBP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms