RNA–Protein interactions for RNA: ENST00000471887.1

HDAC9-221, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 446 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-221ENST00000471887 MYLIPQ8WY64 445 aa8.05□□□□□ -1.12
HDAC9-221ENST00000471887 ASIC4Q96FT7 647 aa8.05□□□□□ -1.12
HDAC9-221ENST00000471887 EPN3Q9H201 632 aa8.05□□□□□ -1.12
HDAC9-221ENST00000471887 EBF1Q9UH73 591 aa8.05□□□□□ -1.12
HDAC9-221ENST00000471887 KIR2DL1P43626 348 aaPredicted RBP8.04□□□□□ -1.12
HDAC9-221ENST00000471887 KIR2DL2P43627 348 aaPredicted RBP8.04□□□□□ -1.12
HDAC9-221ENST00000471887 ERVFC1P60507 584 aa8.04□□□□□ -1.12
HDAC9-221ENST00000471887 AMPD2Q01433 879 aa8.04□□□□□ -1.12
HDAC9-221ENST00000471887 NR0B2Q15466 257 aa8.04□□□□□ -1.12
HDAC9-221ENST00000471887 ZSWIM9Q86XI8 627 aa8.04□□□□□ -1.12
HDAC9-221ENST00000471887 LILRA2Q8N149 483 aa8.04□□□□□ -1.12
HDAC9-221ENST00000471887 NAT16Q8N8M0 369 aa8.04□□□□□ -1.12
HDAC9-221ENST00000471887 ABHD4Q8TB40 342 aa8.04□□□□□ -1.12
HDAC9-221ENST00000471887 FCRL3Q96P31 734 aaPredicted RBP8.04□□□□□ -1.12
HDAC9-221ENST00000471887 ERVK13-1Q9NX77 482 aa8.04□□□□□ -1.12
HDAC9-221ENST00000471887 TNFRSF10DQ9UBN6 386 aa8.04□□□□□ -1.12
HDAC9-221ENST00000471887 EMC9Q9Y3B6 208 aa8.04□□□□□ -1.12
HDAC9-221ENST00000471887 VAMP4O75379 141 aa8.03□□□□□ -1.12
HDAC9-221ENST00000471887 USP2O75604 605 aaPredicted RBP8.03□□□□□ -1.12
HDAC9-221ENST00000471887 RBL2Q08999 1139 aa8.03□□□□□ -1.12
HDAC9-221ENST00000471887 KCNMB1Q16558 191 aa8.03□□□□□ -1.12
HDAC9-221ENST00000471887 FAM168AQ92567 244 aa8.03□□□□□ -1.12
HDAC9-221ENST00000471887 LRP2BPQ9P2M1 347 aa8.03□□□□□ -1.12
HDAC9-221ENST00000471887 AGRPO00253 132 aa8.02□□□□□ -1.13
HDAC9-221ENST00000471887 IFNGR1P15260 489 aa8.02□□□□□ -1.13
HDAC9-221ENST00000471887 SLC14A2Q15849 920 aa8.02□□□□□ -1.13
HDAC9-221ENST00000471887 DPY19L1Q2PZI1 675 aa8.02□□□□□ -1.13
HDAC9-221ENST00000471887 SOGA3Q5TF21 947 aa8.02□□□□□ -1.13
HDAC9-221ENST00000471887 FYB2Q5VWT5 728 aa8.02□□□□□ -1.13
HDAC9-221ENST00000471887 CYP2R1Q6VVX0 501 aa8.02□□□□□ -1.13
HDAC9-221ENST00000471887 CEP128Q6ZU80 1094 aa8.02□□□□□ -1.13
HDAC9-221ENST00000471887 HHIPL1Q96JK4 782 aa8.02□□□□□ -1.13
HDAC9-221ENST00000471887 C19orf44Q9H6X5 657 aa8.02□□□□□ -1.13
HDAC9-221ENST00000471887 AURKAO14965 403 aa8.01□□□□□ -1.13
HDAC9-221ENST00000471887 FGF10O15520 208 aaPredicted RBP8.01□□□□□ -1.13
HDAC9-221ENST00000471887 KCNH1O95259 989 aa8.01□□□□□ -1.13
HDAC9-221ENST00000471887 TRHRP34981 398 aaPredicted RBP8.01□□□□□ -1.13
HDAC9-221ENST00000471887 SLC10A6Q3KNW5 377 aa8.01□□□□□ -1.13
HDAC9-221ENST00000471887 TMEM67Q5HYA8 995 aa8.01□□□□□ -1.13
HDAC9-221ENST00000471887 MCMBPQ9BTE3 642 aa8.01□□□□□ -1.13
HDAC9-221ENST00000471887 SP110Q9HB58 689 aa8.01□□□□□ -1.13
HDAC9-221ENST00000471887 SIRPGQ9P1W8 387 aa8.01□□□□□ -1.13
HDAC9-221ENST00000471887 GPR55Q9Y2T6 319 aaPredicted RBP8.01□□□□□ -1.13
HDAC9-221ENST00000471887 BACE2Q9Y5Z0 518 aa8.01□□□□□ -1.13
HDAC9-221ENST00000471887 FADS2P1A8MWK0 482 aa8□□□□□ -1.13
HDAC9-221ENST00000471887 STXBP3O00186 592 aa8□□□□□ -1.13
HDAC9-221ENST00000471887 ITGAVP06756 1048 aa8□□□□□ -1.13
HDAC9-221ENST00000471887 GLI1P08151 1106 aa8□□□□□ -1.13
HDAC9-221ENST00000471887 RTP1P59025 263 aa8□□□□□ -1.13
HDAC9-221ENST00000471887 EEF1DP3Q658K8 133 aa8□□□□□ -1.13
HDAC9-221ENST00000471887 RCSD1Q6JBY9 416 aa8□□□□□ -1.13
HDAC9-221ENST00000471887 TRIM59Q8IWR1 403 aa8□□□□□ -1.13
HDAC9-221ENST00000471887 ST13P5Q8NFI4 369 aaPredicted RBP8□□□□□ -1.13
HDAC9-221ENST00000471887 MRGPRX3Q96LB0 322 aa8□□□□□ -1.13
HDAC9-221ENST00000471887 DRC1Q96MC2 740 aa8□□□□□ -1.13
HDAC9-221ENST00000471887 GPR160Q9UJ42 338 aa8□□□□□ -1.13
HDAC9-221ENST00000471887 A0A1W2PQ45 241 aaPredicted RBP7.99□□□□□ -1.13
HDAC9-221ENST00000471887 A0A1W2PQY0 241 aa7.99□□□□□ -1.13
HDAC9-221ENST00000471887 C2orf71A6NGG8 1288 aa7.99□□□□□ -1.13
HDAC9-221ENST00000471887 NRDCO43847 1150 aa7.99□□□□□ -1.13
HDAC9-221ENST00000471887 TBC1D8O95759 1140 aa7.99□□□□□ -1.13
HDAC9-221ENST00000471887 SEPHS1P49903 392 aa7.99□□□□□ -1.13
HDAC9-221ENST00000471887 SNX17Q15036 470 aa7.99□□□□□ -1.13
HDAC9-221ENST00000471887 TIGD5Q53EQ6 642 aa7.99□□□□□ -1.13
HDAC9-221ENST00000471887 HLA-DQA1Q5Y7H0 255 aa7.99□□□□□ -1.13
HDAC9-221ENST00000471887 CARMIL2Q6F5E8 1435 aa7.99□□□□□ -1.13
HDAC9-221ENST00000471887 ZNF227Q86WZ6 799 aa7.99□□□□□ -1.13
HDAC9-221ENST00000471887 KSR1Q8IVT5 923 aa7.99□□□□□ -1.13
HDAC9-221ENST00000471887 PTCHD1Q96NR3 888 aa7.99□□□□□ -1.13
HDAC9-221ENST00000471887 LGR4Q9BXB1 951 aa7.99□□□□□ -1.13
HDAC9-221ENST00000471887 CWC22Q9HCG8 908 aaKnown RBP7.99□□□□□ -1.13
HDAC9-221ENST00000471887 MSRB2Q9Y3D2 182 aa7.99□□□□□ -1.13
HDAC9-221ENST00000471887 WTIPA6NIX2 430 aaPredicted RBP7.98□□□□□ -1.13
HDAC9-221ENST00000471887 PAX4O43316 350 aa7.98□□□□□ -1.13
HDAC9-221ENST00000471887 PSPNO60542 156 aa7.98□□□□□ -1.13
HDAC9-221ENST00000471887 GTF2IRD2BQ6EKJ0 949 aa7.98□□□□□ -1.13
HDAC9-221ENST00000471887 SLCO6A1Q86UG4 719 aa7.98□□□□□ -1.13
HDAC9-221ENST00000471887 GTF2IRD2Q86UP8 949 aa7.98□□□□□ -1.13
HDAC9-221ENST00000471887 TMEM52Q8NDY8 209 aa7.98□□□□□ -1.13
HDAC9-221ENST00000471887 KRTAP9-2Q9BYQ4 174 aa7.98□□□□□ -1.13
HDAC9-221ENST00000471887 RNF32Q9H0A6 362 aa7.98□□□□□ -1.13
HDAC9-221ENST00000471887 TAF6LQ9Y6J9 622 aa7.98□□□□□ -1.13
HDAC9-221ENST00000471887 IQCA1LA6NCM1 817 aa7.97□□□□□ -1.13
HDAC9-221ENST00000471887 NOTOA8MTQ0 251 aa7.97□□□□□ -1.13
HDAC9-221ENST00000471887 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.97□□□□□ -1.13
HDAC9-221ENST00000471887 HSF5Q4G112 596 aaPredicted RBP7.97□□□□□ -1.13
HDAC9-221ENST00000471887 GALNT18Q6P9A2 607 aa7.97□□□□□ -1.13
HDAC9-221ENST00000471887 JAMLQ86YT9 394 aa7.97□□□□□ -1.13
HDAC9-221ENST00000471887 PMFBP1Q8TBY8 1022 aa7.97□□□□□ -1.13
HDAC9-221ENST00000471887 BTN2A2Q8WVV5 523 aa7.97□□□□□ -1.13
HDAC9-221ENST00000471887 DNAJC2Q99543 621 aaKnown RBP7.97□□□□□ -1.13
HDAC9-221ENST00000471887 CCDC113Q9H0I3 377 aa7.97□□□□□ -1.13
HDAC9-221ENST00000471887 NKX2-4Q9H2Z4 354 aa7.97□□□□□ -1.13
HDAC9-221ENST00000471887 CYP26B1Q9NR63 512 aa7.97□□□□□ -1.13
HDAC9-221ENST00000471887 ZNF503-AS2A6NEH8 195 aa7.96□□□□□ -1.14
HDAC9-221ENST00000471887 CCDC85CA6NKD9 419 aa7.96□□□□□ -1.14
HDAC9-221ENST00000471887 PDPK1O15530 556 aa7.96□□□□□ -1.14
HDAC9-221ENST00000471887 CEBPAP49715 358 aaPredicted RBP7.96□□□□□ -1.14
HDAC9-221ENST00000471887 SCRN1Q12765 414 aa7.96□□□□□ -1.14
HDAC9-221ENST00000471887 SERINC3Q13530 473 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms