RNA–Protein interactions for RNA: ENST00000471682.1

COMMD6-208, Transcript of COMM domain containing 6, humanhuman

TSL 3

Gene COMMD6, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-208ENST00000471682 PFKFB2O60825 505 aa17.73■□□□□ 0.43
COMMD6-208ENST00000471682 MCM2P49736 904 aa17.73■□□□□ 0.43
COMMD6-208ENST00000471682 FCGRTP55899 365 aa17.73■□□□□ 0.43
COMMD6-208ENST00000471682 SAMD1Q6SPF0 538 aaPredicted RBP17.73■□□□□ 0.43
COMMD6-208ENST00000471682 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.73■□□□□ 0.43
COMMD6-208ENST00000471682 RBM27Q9P2N5 1060 aaKnown RBP17.73■□□□□ 0.43
COMMD6-208ENST00000471682 TPCN1Q9ULQ1 816 aa17.73■□□□□ 0.43
COMMD6-208ENST00000471682 NAP1L2Q9ULW6 460 aaPredicted RBP17.73■□□□□ 0.43
COMMD6-208ENST00000471682 LIMCH1Q9UPQ0 1083 aa17.73■□□□□ 0.43
COMMD6-208ENST00000471682 ZBTB5O15062 677 aa17.72■□□□□ 0.43
COMMD6-208ENST00000471682 STRNO43815 780 aa17.72■□□□□ 0.43
COMMD6-208ENST00000471682 CDC27P30260 824 aa17.72■□□□□ 0.43
COMMD6-208ENST00000471682 LBX1P52954 281 aa17.72■□□□□ 0.43
COMMD6-208ENST00000471682 PLS1Q14651 629 aa17.72■□□□□ 0.43
COMMD6-208ENST00000471682 CDC37Q16543 378 aaPredicted RBP17.72■□□□□ 0.43
COMMD6-208ENST00000471682 SLC35G1Q2M3R5 365 aa17.72■□□□□ 0.43
COMMD6-208ENST00000471682 SNRNP48Q6IEG0 339 aaKnown RBP17.72■□□□□ 0.43
COMMD6-208ENST00000471682 CCAR1Q8IX12 1150 aaKnown RBP17.72■□□□□ 0.43
COMMD6-208ENST00000471682 CCDC144CPQ8IYA2 1237 aa17.72■□□□□ 0.43
COMMD6-208ENST00000471682 SRBD1Q8N5C6 995 aaKnown RBP17.72■□□□□ 0.43
COMMD6-208ENST00000471682 CHST13Q8NET6 341 aa17.72■□□□□ 0.43
COMMD6-208ENST00000471682 RRP36Q96EU6 259 aaKnown RBP17.72■□□□□ 0.43
COMMD6-208ENST00000471682 ZSCAN31Q96LW9 406 aaPredicted RBP17.72■□□□□ 0.43
COMMD6-208ENST00000471682 FBXO40Q9UH90 709 aa17.72■□□□□ 0.43
COMMD6-208ENST00000471682 COL11A1P12107 1806 aaPredicted RBP17.72■□□□□ 0.43
COMMD6-208ENST00000471682 PNMA6FA0A0J9YX94 578 aa17.71■□□□□ 0.43
COMMD6-208ENST00000471682 PLEKHA8P1O95397 391 aa17.71■□□□□ 0.43
COMMD6-208ENST00000471682 ERCC3P19447 782 aa17.71■□□□□ 0.43
COMMD6-208ENST00000471682 HOXD10P28358 340 aa17.71■□□□□ 0.43
COMMD6-208ENST00000471682 PSMC4P43686 418 aa17.71■□□□□ 0.43
COMMD6-208ENST00000471682 PRMT2P55345 433 aa17.71■□□□□ 0.43
COMMD6-208ENST00000471682 FUT2Q10981 343 aa17.71■□□□□ 0.43
COMMD6-208ENST00000471682 CPLX2Q6PUV4 134 aaKnown RBP17.71■□□□□ 0.43
COMMD6-208ENST00000471682 NBPF11Q86T75 865 aa17.71■□□□□ 0.43
COMMD6-208ENST00000471682 ABRAQ8N0Z2 381 aa17.71■□□□□ 0.43
COMMD6-208ENST00000471682 CPXCR1Q8N123 301 aa17.71■□□□□ 0.43
COMMD6-208ENST00000471682 AMNQ9BXJ7 453 aa17.71■□□□□ 0.43
COMMD6-208ENST00000471682 PORCNQ9H237 461 aa17.71■□□□□ 0.43
COMMD6-208ENST00000471682 SLKQ9H2G2 1235 aaPredicted RBP17.71■□□□□ 0.43
COMMD6-208ENST00000471682 CPVLQ9H3G5 476 aa17.71■□□□□ 0.43
COMMD6-208ENST00000471682 RAVER2Q9HCJ3 691 aaKnown RBP17.71■□□□□ 0.43
COMMD6-208ENST00000471682 IFNAR1P17181 557 aa17.7■□□□□ 0.42
COMMD6-208ENST00000471682 ADD1P35611 737 aaKnown RBP17.7■□□□□ 0.42
COMMD6-208ENST00000471682 NTRK3Q16288 839 aa17.7■□□□□ 0.42
COMMD6-208ENST00000471682 QRICH1Q2TAL8 776 aa17.7■□□□□ 0.42
COMMD6-208ENST00000471682 RAB11FIP4Q86YS3 637 aa17.7■□□□□ 0.42
COMMD6-208ENST00000471682 COA7Q96BR5 231 aa17.7■□□□□ 0.42
COMMD6-208ENST00000471682 VAT1LQ9HCJ6 419 aa17.7■□□□□ 0.42
COMMD6-208ENST00000471682 SH2B1Q9NRF2 756 aaPredicted RBP17.7■□□□□ 0.42
COMMD6-208ENST00000471682 SEC63Q9UGP8 760 aaKnown RBP17.7■□□□□ 0.42
COMMD6-208ENST00000471682 CCPG1Q9ULG6 757 aa17.7■□□□□ 0.42
COMMD6-208ENST00000471682 CNTNAP5Q8WYK1 1306 aa17.7■□□□□ 0.42
COMMD6-208ENST00000471682 TNPO2O14787 897 aaKnown RBP17.69■□□□□ 0.42
COMMD6-208ENST00000471682 PEX10O60683 326 aa17.69■□□□□ 0.42
COMMD6-208ENST00000471682 CDKL5O76039 1030 aa17.69■□□□□ 0.42
COMMD6-208ENST00000471682 FMNL1O95466 1100 aaPredicted RBP17.69■□□□□ 0.42
COMMD6-208ENST00000471682 ME3Q16798 604 aa17.69■□□□□ 0.42
COMMD6-208ENST00000471682 CCDC174Q6PII3 467 aa17.69■□□□□ 0.42
COMMD6-208ENST00000471682 GPR142Q7Z601 462 aa17.69■□□□□ 0.42
COMMD6-208ENST00000471682 PLEKHH3Q7Z736 793 aa17.69■□□□□ 0.42
COMMD6-208ENST00000471682 NCAPG2Q86XI2 1143 aa17.69■□□□□ 0.42
COMMD6-208ENST00000471682 FBXO11Q86XK2 927 aa17.69■□□□□ 0.42
COMMD6-208ENST00000471682 TEX2Q8IWB9 1127 aa17.69■□□□□ 0.42
COMMD6-208ENST00000471682 CD99L2Q8TCZ2 262 aa17.69■□□□□ 0.42
COMMD6-208ENST00000471682 SOCS4Q8WXH5 440 aa17.69■□□□□ 0.42
COMMD6-208ENST00000471682 TRIM47Q96LD4 638 aa17.69■□□□□ 0.42
COMMD6-208ENST00000471682 AGBL1Q96MI9 1066 aa17.69■□□□□ 0.42
COMMD6-208ENST00000471682 PIGSQ96S52 555 aa17.69■□□□□ 0.42
COMMD6-208ENST00000471682 RNF26Q9BY78 433 aaPredicted RBP17.69■□□□□ 0.42
COMMD6-208ENST00000471682 EFCC1Q9HA90 598 aa17.69■□□□□ 0.42
COMMD6-208ENST00000471682 RIPK3Q9Y572 518 aa17.69■□□□□ 0.42
COMMD6-208ENST00000471682 IVNS1ABPQ9Y6Y0 642 aa17.69■□□□□ 0.42
COMMD6-208ENST00000471682 ABCB11O95342 1321 aa17.69■□□□□ 0.42
COMMD6-208ENST00000471682 BAZ2BQ9UIF8 2168 aaKnown RBP17.69■□□□□ 0.42
COMMD6-208ENST00000471682 SLC15A5A6NIM6 579 aa17.68■□□□□ 0.42
COMMD6-208ENST00000471682 hCG_1984214I3L0E3 225 aa17.68■□□□□ 0.42
COMMD6-208ENST00000471682 CPLX1O14810 134 aa17.68■□□□□ 0.42
COMMD6-208ENST00000471682 PRPF3O43395 683 aaKnown RBP17.68■□□□□ 0.42
COMMD6-208ENST00000471682 MGAMO43451 1857 aa17.68■□□□□ 0.42
COMMD6-208ENST00000471682 PTPREP23469 700 aa17.68■□□□□ 0.42
COMMD6-208ENST00000471682 CTGFP29279 349 aa17.68■□□□□ 0.42
COMMD6-208ENST00000471682 CCT2P78371 535 aaKnown RBP17.68■□□□□ 0.42
COMMD6-208ENST00000471682 SCRN1Q12765 414 aa17.68■□□□□ 0.42
COMMD6-208ENST00000471682 ZNF713Q8N859 430 aaPredicted RBP17.68■□□□□ 0.42
COMMD6-208ENST00000471682 RGS22Q8NE09 1264 aa17.68■□□□□ 0.42
COMMD6-208ENST00000471682 GTF3C6Q969F1 213 aa17.68■□□□□ 0.42
COMMD6-208ENST00000471682 TRERF1Q96PN7 1200 aa17.68■□□□□ 0.42
COMMD6-208ENST00000471682 LARP6Q9BRS8 491 aaKnown RBP17.68■□□□□ 0.42
COMMD6-208ENST00000471682 ACAD9Q9H845 621 aa17.68■□□□□ 0.42
COMMD6-208ENST00000471682 FCER1AP12319 257 aa17.67■□□□□ 0.42
COMMD6-208ENST00000471682 ALAS1P13196 640 aa17.67■□□□□ 0.42
COMMD6-208ENST00000471682 SNAP25P60880 206 aa17.67■□□□□ 0.42
COMMD6-208ENST00000471682 GRB14Q14449 540 aa17.67■□□□□ 0.42
COMMD6-208ENST00000471682 PKN2Q16513 984 aaKnown RBP17.67■□□□□ 0.42
COMMD6-208ENST00000471682 MORN1Q5T089 497 aa17.67■□□□□ 0.42
COMMD6-208ENST00000471682 HOMER1Q86YM7 354 aa17.67■□□□□ 0.42
COMMD6-208ENST00000471682 CMTR1Q8N1G2 835 aaKnown RBP17.67■□□□□ 0.42
COMMD6-208ENST00000471682 SAMD3Q8N6K7 520 aa17.67■□□□□ 0.42
COMMD6-208ENST00000471682 ARHGAP39Q9C0H5 1083 aa17.67■□□□□ 0.42
COMMD6-208ENST00000471682 CWC22Q9HCG8 908 aaKnown RBP17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms