RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 TYW1BQ6NUM6 668 aa22.18■■□□□ 1.14
PSPC1-203ENST00000471658 HEATR3Q7Z4Q2 680 aa22.18■■□□□ 1.14
PSPC1-203ENST00000471658 RLFQ13129 1914 aa22.18■■□□□ 1.14
PSPC1-203ENST00000471658 VWA5AO00534 786 aa22.17■■□□□ 1.14
PSPC1-203ENST00000471658 IRX3P78415 501 aaPredicted RBP22.17■■□□□ 1.14
PSPC1-203ENST00000471658 WASF1Q92558 559 aa22.17■■□□□ 1.14
PSPC1-203ENST00000471658 SLC38A10Q9HBR0 1119 aa22.17■■□□□ 1.14
PSPC1-203ENST00000471658 HOXC10Q9NYD6 342 aa22.17■■□□□ 1.14
PSPC1-203ENST00000471658 RBM27Q9P2N5 1060 aaKnown RBP22.17■■□□□ 1.14
PSPC1-203ENST00000471658 ADAMTS5Q9UNA0 930 aa22.17■■□□□ 1.14
PSPC1-203ENST00000471658 MANSC4A6NHS7 340 aaPredicted RBP22.17■■□□□ 1.14
PSPC1-203ENST00000471658 IGF2BP3O00425 579 aaKnown RBP eCLIP22.17■■□□□ 1.14
PSPC1-203ENST00000471658 AOC2O75106 756 aa22.17■■□□□ 1.14
PSPC1-203ENST00000471658 CYP2C8P10632 490 aa22.17■■□□□ 1.14
PSPC1-203ENST00000471658 KIF23Q02241 960 aaPredicted RBP22.17■■□□□ 1.14
PSPC1-203ENST00000471658 ANKRD23Q86SG2 305 aa22.17■■□□□ 1.14
PSPC1-203ENST00000471658 CAPNS2Q96L46 248 aa22.17■■□□□ 1.14
PSPC1-203ENST00000471658 RAVER2Q9HCJ3 691 aaKnown RBP22.17■■□□□ 1.14
PSPC1-203ENST00000471658 KCNJ14Q9UNX9 436 aa22.17■■□□□ 1.14
PSPC1-203ENST00000471658 ZNF536O15090 1300 aa22.16■■□□□ 1.14
PSPC1-203ENST00000471658 STXBP3O00186 592 aa22.16■■□□□ 1.14
PSPC1-203ENST00000471658 OSBPP22059 807 aa22.16■■□□□ 1.14
PSPC1-203ENST00000471658 CPXCR1Q8N123 301 aa22.16■■□□□ 1.14
PSPC1-203ENST00000471658 REPS2Q8NFH8 660 aa22.16■■□□□ 1.14
PSPC1-203ENST00000471658 C8orf76Q96K31 380 aa22.16■■□□□ 1.14
PSPC1-203ENST00000471658 AGBL1Q96MI9 1066 aa22.16■■□□□ 1.14
PSPC1-203ENST00000471658 PARP14Q460N5 1801 aa22.16■■□□□ 1.14
PSPC1-203ENST00000471658 MYH6P13533 1939 aa22.15■■□□□ 1.14
PSPC1-203ENST00000471658 ZBED4O75132 1171 aa22.15■■□□□ 1.14
PSPC1-203ENST00000471658 HERVK_113P62684 666 aa22.15■■□□□ 1.14
PSPC1-203ENST00000471658 PABPC4Q13310 644 aaKnown RBP eCLIP22.15■■□□□ 1.14
PSPC1-203ENST00000471658 USH1GQ495M9 461 aa22.15■■□□□ 1.14
PSPC1-203ENST00000471658 FBXO11Q86XK2 927 aa22.15■■□□□ 1.14
PSPC1-203ENST00000471658 BARHL2Q9NY43 387 aa22.15■■□□□ 1.14
PSPC1-203ENST00000471658 KIF3AQ9Y496 699 aa22.15■■□□□ 1.14
PSPC1-203ENST00000471658 ADAMTS3O15072 1205 aa22.14■■□□□ 1.14
PSPC1-203ENST00000471658 TMEM132BQ14DG7 1078 aa22.14■■□□□ 1.14
PSPC1-203ENST00000471658 FOXD4L5Q5VV16 416 aaPredicted RBP22.14■■□□□ 1.14
PSPC1-203ENST00000471658 KRT40Q6A162 431 aa22.14■■□□□ 1.14
PSPC1-203ENST00000471658 FOXD4L4Q8WXT5 416 aaPredicted RBP22.14■■□□□ 1.14
PSPC1-203ENST00000471658 MYPNQ86TC9 1320 aa22.14■■□□□ 1.13
PSPC1-203ENST00000471658 VPS37CA5D8V6 355 aaPredicted RBP22.13■■□□□ 1.13
PSPC1-203ENST00000471658 STX6O43752 255 aa22.13■■□□□ 1.13
PSPC1-203ENST00000471658 FBXO18Q8NFZ0 1043 aa22.13■■□□□ 1.13
PSPC1-203ENST00000471658 AMNQ9BXJ7 453 aa22.13■■□□□ 1.13
PSPC1-203ENST00000471658 BTBD7Q9P203 1132 aa22.13■■□□□ 1.13
PSPC1-203ENST00000471658 CTDP1Q9Y5B0 961 aaPredicted RBP22.13■■□□□ 1.13
PSPC1-203ENST00000471658 PCDHA1Q9Y5I3 950 aa22.13■■□□□ 1.13
PSPC1-203ENST00000471658 PDCP20941 246 aa22.13■■□□□ 1.13
PSPC1-203ENST00000471658 MTMR6Q9Y217 621 aa22.13■■□□□ 1.13
PSPC1-203ENST00000471658 SLC45A1Q9Y2W3 748 aa22.13■■□□□ 1.13
PSPC1-203ENST00000471658 ZDHHC9Q9Y397 364 aa22.13■■□□□ 1.13
PSPC1-203ENST00000471658 H3BQV1 296 aa22.12■■□□□ 1.13
PSPC1-203ENST00000471658 CNMDO75829 334 aa22.12■■□□□ 1.13
PSPC1-203ENST00000471658 NAPAP54920 295 aa22.12■■□□□ 1.13
PSPC1-203ENST00000471658 IFFO2Q5TF58 517 aa22.12■■□□□ 1.13
PSPC1-203ENST00000471658 LBX2Q6XYB7 198 aa22.12■■□□□ 1.13
PSPC1-203ENST00000471658 IFNL1Q8IU54 200 aa22.12■■□□□ 1.13
PSPC1-203ENST00000471658 PAGR1Q9BTK6 254 aa22.12■■□□□ 1.13
PSPC1-203ENST00000471658 TXNRD2Q9NNW7 524 aa22.12■■□□□ 1.13
PSPC1-203ENST00000471658 RBPJLQ9UBG7 517 aa22.12■■□□□ 1.13
PSPC1-203ENST00000471658 ZNF214Q9UL59 606 aaPredicted RBP22.12■■□□□ 1.13
PSPC1-203ENST00000471658 ICAM1P05362 532 aa22.11■■□□□ 1.13
PSPC1-203ENST00000471658 FDX1P10109 184 aa22.11■■□□□ 1.13
PSPC1-203ENST00000471658 VEGFBP49765 207 aa22.11■■□□□ 1.13
PSPC1-203ENST00000471658 INHBEP58166 350 aa22.11■■□□□ 1.13
PSPC1-203ENST00000471658 TRIM29Q14134 588 aa22.11■■□□□ 1.13
PSPC1-203ENST00000471658 PHF20Q9BVI0 1012 aa22.11■■□□□ 1.13
PSPC1-203ENST00000471658 PNMA3Q9UL41 463 aa22.11■■□□□ 1.13
PSPC1-203ENST00000471658 CCPG1Q9ULG6 757 aa22.11■■□□□ 1.13
PSPC1-203ENST00000471658 RIPK3Q9Y572 518 aa22.11■■□□□ 1.13
PSPC1-203ENST00000471658 SMCHD1A6NHR9 2005 aa22.11■■□□□ 1.13
PSPC1-203ENST00000471658 TM4SF4P48230 202 aa22.1■■□□□ 1.13
PSPC1-203ENST00000471658 NLRP5P59047 1200 aa22.1■■□□□ 1.13
PSPC1-203ENST00000471658 NOGQ13253 232 aa22.1■■□□□ 1.13
PSPC1-203ENST00000471658 PLS1Q14651 629 aa22.1■■□□□ 1.13
PSPC1-203ENST00000471658 NPY5RQ15761 445 aa22.1■■□□□ 1.13
PSPC1-203ENST00000471658 SH3GLB2Q9NR46 395 aa22.1■■□□□ 1.13
PSPC1-203ENST00000471658 SMCO2A6NFE2 343 aa22.09■■□□□ 1.13
PSPC1-203ENST00000471658 ALAS1P13196 640 aa22.09■■□□□ 1.13
PSPC1-203ENST00000471658 XBP1P17861 261 aa22.09■■□□□ 1.13
PSPC1-203ENST00000471658 SREBF2Q12772 1141 aa22.09■■□□□ 1.13
PSPC1-203ENST00000471658 Q3C1V9 767 aa22.09■■□□□ 1.13
PSPC1-203ENST00000471658 OXER1Q8TDS5 423 aa22.09■■□□□ 1.13
PSPC1-203ENST00000471658 WDR33Q9C0J8 1336 aaKnown RBP22.09■■□□□ 1.13
PSPC1-203ENST00000471658 COL11A1P12107 1806 aaPredicted RBP22.09■■□□□ 1.13
PSPC1-203ENST00000471658 hCG_1984214I3L0E3 225 aa22.09■■□□□ 1.13
PSPC1-203ENST00000471658 MMP1P03956 469 aa22.09■■□□□ 1.13
PSPC1-203ENST00000471658 SNRNP48Q6IEG0 339 aaKnown RBP22.09■■□□□ 1.13
PSPC1-203ENST00000471658 FERMT3Q86UX7 667 aa22.09■■□□□ 1.13
PSPC1-203ENST00000471658 ZNF713Q8N859 430 aaPredicted RBP22.09■■□□□ 1.13
PSPC1-203ENST00000471658 SMCR8Q8TEV9 937 aaPredicted RBP22.09■■□□□ 1.13
PSPC1-203ENST00000471658 HOMER2Q9NSB8 354 aa22.09■■□□□ 1.13
PSPC1-203ENST00000471658 OPLAHO14841 1288 aa22.08■■□□□ 1.13
PSPC1-203ENST00000471658 BRD1O95696 1058 aa22.08■■□□□ 1.13
PSPC1-203ENST00000471658 STAT3P40763 770 aa22.08■■□□□ 1.13
PSPC1-203ENST00000471658 C1QTNF8P60827 252 aa22.08■■□□□ 1.13
PSPC1-203ENST00000471658 MCTP1Q6DN14 999 aa22.08■■□□□ 1.13
PSPC1-203ENST00000471658 MB21D1Q8N884 522 aa22.08■■□□□ 1.13
PSPC1-203ENST00000471658 TBC1D5Q92609 795 aa22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms