RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 LRRFIP1Q32MZ4 808 aaKnown RBP2.5□□□□□ -2.01
UBXN4-207ENST00000471246 NBPF9Q3BBW0 867 aa2.5□□□□□ -2.01
UBXN4-207ENST00000471246 BBS9Q3SYG4 887 aa2.5□□□□□ -2.01
UBXN4-207ENST00000471246 TIGD5Q53EQ6 642 aa2.5□□□□□ -2.01
UBXN4-207ENST00000471246 FERMT3Q86UX7 667 aa2.5□□□□□ -2.01
UBXN4-207ENST00000471246 TMEM192Q8IY95 271 aa2.5□□□□□ -2.01
UBXN4-207ENST00000471246 DAGLBQ8NCG7 672 aa2.5□□□□□ -2.01
UBXN4-207ENST00000471246 PDZD8Q8NEN9 1154 aa2.5□□□□□ -2.01
UBXN4-207ENST00000471246 SYTL5Q8TDW5 730 aaPredicted RBP2.5□□□□□ -2.01
UBXN4-207ENST00000471246 TCTN2Q96GX1 697 aa2.5□□□□□ -2.01
UBXN4-207ENST00000471246 FERD3LQ96RJ6 166 aa2.5□□□□□ -2.01
UBXN4-207ENST00000471246 SLC9A7Q96T83 725 aa2.5□□□□□ -2.01
UBXN4-207ENST00000471246 C1QTNF3Q9BXJ4 246 aa2.5□□□□□ -2.01
UBXN4-207ENST00000471246 FOXP3Q9BZS1 431 aa2.5□□□□□ -2.01
UBXN4-207ENST00000471246 MKRN2Q9H000 416 aaKnown RBP2.5□□□□□ -2.01
UBXN4-207ENST00000471246 C19orf44Q9H6X5 657 aa2.5□□□□□ -2.01
UBXN4-207ENST00000471246 C11orf21Q9P2W6 132 aa2.5□□□□□ -2.01
UBXN4-207ENST00000471246 MBD1Q9UIS9 605 aaPredicted RBP2.5□□□□□ -2.01
UBXN4-207ENST00000471246 DDX41Q9UJV9 622 aaKnown RBP2.5□□□□□ -2.01
UBXN4-207ENST00000471246 PPT2Q9UMR5 302 aa2.5□□□□□ -2.01
UBXN4-207ENST00000471246 FITM1A5D6W6 292 aa2.49□□□□□ -2.01
UBXN4-207ENST00000471246 MEIS1O00470 390 aa2.49□□□□□ -2.01
UBXN4-207ENST00000471246 SIGLEC6O43699 453 aa2.49□□□□□ -2.01
UBXN4-207ENST00000471246 FKTNO75072 461 aa2.49□□□□□ -2.01
UBXN4-207ENST00000471246 USP2O75604 605 aaPredicted RBP2.49□□□□□ -2.01
UBXN4-207ENST00000471246 IMPDH2P12268 514 aa2.49□□□□□ -2.01
UBXN4-207ENST00000471246 RPL10P27635 214 aaKnown RBP2.49□□□□□ -2.01
UBXN4-207ENST00000471246 EPHB3P54753 998 aa2.49□□□□□ -2.01
UBXN4-207ENST00000471246 CHRNEQ04844 493 aa2.49□□□□□ -2.01
UBXN4-207ENST00000471246 KLF10Q13118 480 aa2.49□□□□□ -2.01
UBXN4-207ENST00000471246 PAK2Q13177 524 aa2.49□□□□□ -2.01
UBXN4-207ENST00000471246 UBXN11Q5T124 520 aa2.49□□□□□ -2.01
UBXN4-207ENST00000471246 TDRD10Q5VZ19 366 aaKnown RBP2.49□□□□□ -2.01
UBXN4-207ENST00000471246 CCDC81Q6ZN84 652 aa2.49□□□□□ -2.01
UBXN4-207ENST00000471246 RNF111Q6ZNA4 994 aa2.49□□□□□ -2.01
UBXN4-207ENST00000471246 WAPLQ7Z5K2 1190 aa2.49□□□□□ -2.01
UBXN4-207ENST00000471246 SPRED1Q7Z699 444 aa2.49□□□□□ -2.01
UBXN4-207ENST00000471246 METTL16Q86W50 562 aaKnown RBP2.49□□□□□ -2.01
UBXN4-207ENST00000471246 PPFIBP1Q86W92 1011 aa2.49□□□□□ -2.01
UBXN4-207ENST00000471246 TMEFF1Q8IYR6 380 aa2.49□□□□□ -2.01
UBXN4-207ENST00000471246 LILRA2Q8N149 483 aa2.49□□□□□ -2.01
UBXN4-207ENST00000471246 OXR1Q8N573 874 aa2.49□□□□□ -2.01
UBXN4-207ENST00000471246 TAB3Q8N5C8 712 aaPredicted RBP2.49□□□□□ -2.01
UBXN4-207ENST00000471246 ZNF655Q8N720 491 aaPredicted RBP2.49□□□□□ -2.01
UBXN4-207ENST00000471246 ANKS4BQ8N8V4 417 aa2.49□□□□□ -2.01
UBXN4-207ENST00000471246 LINC01356Q8N9X3 169 aa2.49□□□□□ -2.01
UBXN4-207ENST00000471246 ENOX1Q8TC92 643 aaKnown RBP2.49□□□□□ -2.01
UBXN4-207ENST00000471246 DHX38Q92620 1227 aaKnown RBP2.49□□□□□ -2.01
UBXN4-207ENST00000471246 SYTL4Q96C24 671 aaPredicted RBP2.49□□□□□ -2.01
UBXN4-207ENST00000471246 MRRFQ96E11 262 aaKnown RBP2.49□□□□□ -2.01
UBXN4-207ENST00000471246 INTS4Q96HW7 963 aaKnown RBP2.49□□□□□ -2.01
UBXN4-207ENST00000471246 G6PC3Q9BUM1 346 aa2.49□□□□□ -2.01
UBXN4-207ENST00000471246 PRDM14Q9GZV8 571 aa2.49□□□□□ -2.01
UBXN4-207ENST00000471246 CHST7Q9NS84 486 aa2.49□□□□□ -2.01
UBXN4-207ENST00000471246 GFOD1Q9NXC2 390 aa2.49□□□□□ -2.01
UBXN4-207ENST00000471246 SUCOQ9UBS9 1254 aaKnown RBP2.49□□□□□ -2.01
UBXN4-207ENST00000471246 EBF1Q9UH73 591 aa2.49□□□□□ -2.01
UBXN4-207ENST00000471246 ING1Q9UK53 422 aaPredicted RBP2.49□□□□□ -2.01
UBXN4-207ENST00000471246 TCFL5Q9UL49 500 aa2.49□□□□□ -2.01
UBXN4-207ENST00000471246 MINPP1Q9UNW1 487 aa2.49□□□□□ -2.01
UBXN4-207ENST00000471246 PCDHB12Q9Y5F1 795 aa2.49□□□□□ -2.01
UBXN4-207ENST00000471246 SSU72P8A0A1W2PR75 194 aa2.48□□□□□ -2.01
UBXN4-207ENST00000471246 TMEM82A0PJX8 343 aa2.48□□□□□ -2.01
UBXN4-207ENST00000471246 UNCXA6NJT0 531 aa2.48□□□□□ -2.01
UBXN4-207ENST00000471246 KRTAP29-1A8MX34 341 aaPredicted RBP2.48□□□□□ -2.01
UBXN4-207ENST00000471246 C9IYK1 514 aa2.48□□□□□ -2.01
UBXN4-207ENST00000471246 SHOXO15266 292 aa2.48□□□□□ -2.01
UBXN4-207ENST00000471246 EFEMP2O95967 443 aa2.48□□□□□ -2.01
UBXN4-207ENST00000471246 SYPP08247 313 aa2.48□□□□□ -2.01
UBXN4-207ENST00000471246 CTSKP43235 329 aa2.48□□□□□ -2.01
UBXN4-207ENST00000471246 GALK1P51570 392 aa2.48□□□□□ -2.01
UBXN4-207ENST00000471246 PMS1P54277 932 aaKnown RBP2.48□□□□□ -2.01
UBXN4-207ENST00000471246 PCBP3P57721 371 aaKnown RBP2.48□□□□□ -2.01
UBXN4-207ENST00000471246 HDLBPQ00341 1268 aaKnown RBP2.48□□□□□ -2.01
UBXN4-207ENST00000471246 NR0B2Q15466 257 aa2.48□□□□□ -2.01
UBXN4-207ENST00000471246 ZYXQ15942 572 aaKnown RBP2.48□□□□□ -2.01
UBXN4-207ENST00000471246 LRCH2Q5VUJ6 765 aa2.48□□□□□ -2.01
UBXN4-207ENST00000471246 FBXW10Q5XX13 1052 aa2.48□□□□□ -2.01
UBXN4-207ENST00000471246 CRTC3Q6UUV7 619 aa2.48□□□□□ -2.01
UBXN4-207ENST00000471246 ZPBP2Q6X784 338 aa2.48□□□□□ -2.01
UBXN4-207ENST00000471246 NT5DC4Q86YG4 428 aa2.48□□□□□ -2.01
UBXN4-207ENST00000471246 CCDC144CPQ8IYA2 1237 aa2.48□□□□□ -2.01
UBXN4-207ENST00000471246 ZNF654Q8IZM8 581 aa2.48□□□□□ -2.01
UBXN4-207ENST00000471246 USHBP1Q8N6Y0 703 aa2.48□□□□□ -2.01
UBXN4-207ENST00000471246 LINC00116Q8NCU8 138 aa2.48□□□□□ -2.01
UBXN4-207ENST00000471246 LINC01599Q8WXQ3 324 aa2.48□□□□□ -2.01
UBXN4-207ENST00000471246 GPRASP2Q96D09 838 aa2.48□□□□□ -2.01
UBXN4-207ENST00000471246 MAP6Q96JE9 813 aa2.48□□□□□ -2.01
UBXN4-207ENST00000471246 TM9SF2Q99805 663 aa2.48□□□□□ -2.01
UBXN4-207ENST00000471246 GINM1Q9NU53 330 aa2.48□□□□□ -2.01
UBXN4-207ENST00000471246 KIAA1522Q9P206 1035 aaPredicted RBP2.48□□□□□ -2.01
UBXN4-207ENST00000471246 GPR160Q9UJ42 338 aa2.48□□□□□ -2.01
UBXN4-207ENST00000471246 FBXL21Q9UKT6 434 aa2.48□□□□□ -2.01
UBXN4-207ENST00000471246 ZNF281Q9Y2X9 895 aa2.48□□□□□ -2.01
UBXN4-207ENST00000471246 NOTOA8MTQ0 251 aa2.47□□□□□ -2.01
UBXN4-207ENST00000471246 IRS4O14654 1257 aaPredicted RBP2.47□□□□□ -2.01
UBXN4-207ENST00000471246 FZD7O75084 574 aa2.47□□□□□ -2.01
UBXN4-207ENST00000471246 ZNF205O95201 554 aa2.47□□□□□ -2.01
UBXN4-207ENST00000471246 ITGB3P05106 788 aa2.47□□□□□ -2.01
UBXN4-207ENST00000471246 GUCY2CP25092 1073 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms