RNA–Protein interactions for RNA: ENST00000468477.1

CDHR3-206, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 482 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-206ENST00000468477 MCTP1Q6DN14 999 aa4.49□□□□□ -1.69
CDHR3-206ENST00000468477 CDPF1Q6NVV7 123 aa4.49□□□□□ -1.69
CDHR3-206ENST00000468477 PDXDC1Q6P996 788 aa4.49□□□□□ -1.69
CDHR3-206ENST00000468477 CCDC81Q6ZN84 652 aa4.49□□□□□ -1.69
CDHR3-206ENST00000468477 KRT77Q7Z794 578 aa4.49□□□□□ -1.69
CDHR3-206ENST00000468477 ANKRD23Q86SG2 305 aa4.49□□□□□ -1.69
CDHR3-206ENST00000468477 ZBTB46Q86UZ6 589 aa4.49□□□□□ -1.69
CDHR3-206ENST00000468477 PJA1Q8NG27 643 aa4.49□□□□□ -1.69
CDHR3-206ENST00000468477 ZNF296Q8WUU4 475 aaPredicted RBP4.49□□□□□ -1.69
CDHR3-206ENST00000468477 EZH1Q92800 747 aaPredicted RBP4.49□□□□□ -1.69
CDHR3-206ENST00000468477 TIFAQ96CG3 184 aa4.49□□□□□ -1.69
CDHR3-206ENST00000468477 MTMR8Q96EF0 704 aa4.49□□□□□ -1.69
CDHR3-206ENST00000468477 TTC14Q96N46 770 aa4.49□□□□□ -1.69
CDHR3-206ENST00000468477 STRBPQ96SI9 672 aaKnown RBP4.49□□□□□ -1.69
CDHR3-206ENST00000468477 YIPF4Q9BSR8 244 aa4.49□□□□□ -1.69
CDHR3-206ENST00000468477 RSRP1Q9BUV0 290 aa4.49□□□□□ -1.69
CDHR3-206ENST00000468477 CCDC8Q9H0W5 538 aaPredicted RBP4.49□□□□□ -1.69
CDHR3-206ENST00000468477 OBP2AQ9NY56 170 aa4.49□□□□□ -1.69
CDHR3-206ENST00000468477 FAM8A1Q9UBU6 413 aa4.49□□□□□ -1.69
CDHR3-206ENST00000468477 IPPQ9Y573 584 aa4.49□□□□□ -1.69
CDHR3-206ENST00000468477 hCG_1984214I3L0E3 225 aa4.48□□□□□ -1.69
CDHR3-206ENST00000468477 AOC2O75106 756 aa4.48□□□□□ -1.69
CDHR3-206ENST00000468477 DLGAP3O95886 979 aa4.48□□□□□ -1.69
CDHR3-206ENST00000468477 F13BP05160 661 aa4.48□□□□□ -1.69
CDHR3-206ENST00000468477 SPINK2P20155 84 aa4.48□□□□□ -1.69
CDHR3-206ENST00000468477 SSRP1Q08945 709 aaKnown RBP4.48□□□□□ -1.69
CDHR3-206ENST00000468477 CHAF1AQ13111 956 aaPredicted RBP4.48□□□□□ -1.69
CDHR3-206ENST00000468477 TCIRG1Q13488 830 aa4.48□□□□□ -1.69
CDHR3-206ENST00000468477 PWP1Q13610 501 aa4.48□□□□□ -1.69
CDHR3-206ENST00000468477 MTMR1Q13613 665 aa4.48□□□□□ -1.69
CDHR3-206ENST00000468477 PCNX4Q63HM2 1172 aa4.48□□□□□ -1.69
CDHR3-206ENST00000468477 PPP4R3AQ6IN85 833 aa4.48□□□□□ -1.69
CDHR3-206ENST00000468477 ZAR1Q86SH2 424 aa4.48□□□□□ -1.69
CDHR3-206ENST00000468477 RNF180Q86T96 592 aa4.48□□□□□ -1.69
CDHR3-206ENST00000468477 VSIG10LQ86VR7 867 aa4.48□□□□□ -1.69
CDHR3-206ENST00000468477 JMYQ8N9B5 988 aa4.48□□□□□ -1.69
CDHR3-206ENST00000468477 EPS8L3Q8TE67 593 aaKnown RBP4.48□□□□□ -1.69
CDHR3-206ENST00000468477 JPH3Q8WXH2 748 aaPredicted RBP4.48□□□□□ -1.69
CDHR3-206ENST00000468477 TRMT2BQ96GJ1 504 aaKnown RBP4.48□□□□□ -1.69
CDHR3-206ENST00000468477 SHDQ96IW2 340 aa4.48□□□□□ -1.69
CDHR3-206ENST00000468477 FBXL18Q96ME1 805 aa4.48□□□□□ -1.69
CDHR3-206ENST00000468477 MYCBPQ99417 103 aaPredicted RBP4.48□□□□□ -1.69
CDHR3-206ENST00000468477 ELAC2Q9BQ52 826 aaKnown RBP4.48□□□□□ -1.69
CDHR3-206ENST00000468477 SARGQ9BW04 601 aa4.48□□□□□ -1.69
CDHR3-206ENST00000468477 EMILIN2Q9BXX0 1053 aa4.48□□□□□ -1.69
CDHR3-206ENST00000468477 ATXN3LQ9H3M9 355 aa4.48□□□□□ -1.69
CDHR3-206ENST00000468477 RETREG1Q9H6L5 497 aa4.48□□□□□ -1.69
CDHR3-206ENST00000468477 LGR6Q9HBX8 967 aa4.48□□□□□ -1.69
CDHR3-206ENST00000468477 ABCB6Q9NP58 842 aa4.48□□□□□ -1.69
CDHR3-206ENST00000468477 TMEM39AQ9NV64 488 aa4.48□□□□□ -1.69
CDHR3-206ENST00000468477 SLC5A4Q9NY91 659 aa4.48□□□□□ -1.69
CDHR3-206ENST00000468477 ACTR10Q9NZ32 417 aa4.48□□□□□ -1.69
CDHR3-206ENST00000468477 FEZ2Q9UHY8 353 aaPredicted RBP4.48□□□□□ -1.69
CDHR3-206ENST00000468477 DAGLAQ9Y4D2 1042 aa4.48□□□□□ -1.69
CDHR3-206ENST00000468477 SAMM50Q9Y512 469 aa4.48□□□□□ -1.69
CDHR3-206ENST00000468477 ACTL7BQ9Y614 415 aa4.48□□□□□ -1.69
CDHR3-206ENST00000468477 MORC2Q9Y6X9 1032 aaPredicted RBP4.48□□□□□ -1.69
CDHR3-206ENST00000468477 COL17A1Q9UMD9 1497 aaPredicted RBP4.48□□□□□ -1.69
CDHR3-206ENST00000468477 A0A1W2PRQ8 180 aa4.47□□□□□ -1.69
CDHR3-206ENST00000468477 ORC4O43929 436 aa4.47□□□□□ -1.69
CDHR3-206ENST00000468477 MED26O95402 600 aa4.47□□□□□ -1.69
CDHR3-206ENST00000468477 NFICP08651 508 aa4.47□□□□□ -1.69
CDHR3-206ENST00000468477 CPEP16870 476 aa4.47□□□□□ -1.69
CDHR3-206ENST00000468477 ZSCAN20P17040 1043 aaPredicted RBP4.47□□□□□ -1.69
CDHR3-206ENST00000468477 TNFAIP3P21580 790 aa4.47□□□□□ -1.69
CDHR3-206ENST00000468477 FCGRTP55899 365 aa4.47□□□□□ -1.69
CDHR3-206ENST00000468477 GLIPR1L2Q4G1C9 344 aa4.47□□□□□ -1.69
CDHR3-206ENST00000468477 COBLL1Q53SF7 1204 aa4.47□□□□□ -1.69
CDHR3-206ENST00000468477 LARP1BQ659C4 914 aaKnown RBP4.47□□□□□ -1.69
CDHR3-206ENST00000468477 CFAP161Q6P656 301 aa4.47□□□□□ -1.69
CDHR3-206ENST00000468477 C1orf228Q6PIY5 440 aa4.47□□□□□ -1.69
CDHR3-206ENST00000468477 ARHGAP27Q6ZUM4 889 aa4.47□□□□□ -1.69
CDHR3-206ENST00000468477 SPATC1Q76KD6 591 aa4.47□□□□□ -1.69
CDHR3-206ENST00000468477 MAATS1Q7Z4T9 603 aa4.47□□□□□ -1.69
CDHR3-206ENST00000468477 SKAP1Q86WV1 359 aa4.47□□□□□ -1.69
CDHR3-206ENST00000468477 TP53INP2Q8IXH6 220 aa4.47□□□□□ -1.69
CDHR3-206ENST00000468477 IFNL2Q8IZJ0 200 aa4.47□□□□□ -1.69
CDHR3-206ENST00000468477 CHCHD4Q8N4Q1 142 aa4.47□□□□□ -1.69
CDHR3-206ENST00000468477 FAM169BQ8N8A8 192 aa4.47□□□□□ -1.69
CDHR3-206ENST00000468477 AGBL5Q8NDL9 886 aa4.47□□□□□ -1.69
CDHR3-206ENST00000468477 RIN3Q8TB24 985 aa4.47□□□□□ -1.69
CDHR3-206ENST00000468477 CHMP4CQ96CF2 233 aa4.47□□□□□ -1.69
CDHR3-206ENST00000468477 NT5C1AQ9BXI3 368 aa4.47□□□□□ -1.69
CDHR3-206ENST00000468477 NRSN2Q9GZP1 204 aa4.47□□□□□ -1.69
CDHR3-206ENST00000468477 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.47□□□□□ -1.69
CDHR3-206ENST00000468477 CHMP4BQ9H444 224 aaKnown RBP4.47□□□□□ -1.69
CDHR3-206ENST00000468477 CNNM2Q9H8M5 875 aa4.47□□□□□ -1.69
CDHR3-206ENST00000468477 FBRSQ9HAH7 460 aa4.47□□□□□ -1.69
CDHR3-206ENST00000468477 SSU72Q9NP77 194 aaKnown RBP4.47□□□□□ -1.69
CDHR3-206ENST00000468477 PLCB1Q9NQ66 1216 aa4.47□□□□□ -1.69
CDHR3-206ENST00000468477 KRT82Q9NSB4 513 aa4.47□□□□□ -1.69
CDHR3-206ENST00000468477 APAF1O14727 1248 aa4.46□□□□□ -1.7
CDHR3-206ENST00000468477 SNX2O60749 519 aa4.46□□□□□ -1.7
CDHR3-206ENST00000468477 PGRP06401 933 aa4.46□□□□□ -1.7
CDHR3-206ENST00000468477 GSTP1P09211 210 aaKnown RBP4.46□□□□□ -1.7
CDHR3-206ENST00000468477 TGFB3P10600 412 aa4.46□□□□□ -1.7
CDHR3-206ENST00000468477 ATICP31939 592 aa4.46□□□□□ -1.7
CDHR3-206ENST00000468477 DDIT3P35638 169 aa4.46□□□□□ -1.7
CDHR3-206ENST00000468477 ZNF157P51786 506 aaPredicted RBP4.46□□□□□ -1.7
CDHR3-206ENST00000468477 EIF6P56537 245 aaKnown RBP4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms