RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 RNF26Q9BY78 433 aaPredicted RBP17.62■□□□□ 0.41
SNIP1-202ENST00000468040 RBPJLQ9UBG7 517 aa17.62■□□□□ 0.41
SNIP1-202ENST00000468040 MORF4L1Q9UBU8 362 aa17.62■□□□□ 0.41
SNIP1-202ENST00000468040 PNMA6FA0A0J9YX94 578 aa17.61■□□□□ 0.41
SNIP1-202ENST00000468040 ICAM1P05362 532 aa17.61■□□□□ 0.41
SNIP1-202ENST00000468040 TMEM132BQ14DG7 1078 aa17.61■□□□□ 0.41
SNIP1-202ENST00000468040 CCDC174Q6PII3 467 aa17.61■□□□□ 0.41
SNIP1-202ENST00000468040 JMYQ8N9B5 988 aa17.61■□□□□ 0.41
SNIP1-202ENST00000468040 GPRC5AQ8NFJ5 357 aa17.61■□□□□ 0.41
SNIP1-202ENST00000468040 PIGSQ96S52 555 aa17.61■□□□□ 0.41
SNIP1-202ENST00000468040 TEX13BQ9BXU2 312 aa17.61■□□□□ 0.41
SNIP1-202ENST00000468040 BTBD7Q9P203 1132 aa17.61■□□□□ 0.41
SNIP1-202ENST00000468040 ZNF214Q9UL59 606 aaPredicted RBP17.61■□□□□ 0.41
SNIP1-202ENST00000468040 PRPF3O43395 683 aaKnown RBP17.6■□□□□ 0.41
SNIP1-202ENST00000468040 FMNL1O95466 1100 aaPredicted RBP17.6■□□□□ 0.41
SNIP1-202ENST00000468040 BCRP11274 1271 aa17.6■□□□□ 0.41
SNIP1-202ENST00000468040 COPB2P35606 906 aa17.6■□□□□ 0.41
SNIP1-202ENST00000468040 SNAP25P60880 206 aa17.6■□□□□ 0.41
SNIP1-202ENST00000468040 ERVK-9P63128 1117 aa17.6■□□□□ 0.41
SNIP1-202ENST00000468040 ERVK-24P63145 666 aa17.6■□□□□ 0.41
SNIP1-202ENST00000468040 CCNA1P78396 465 aa17.6■□□□□ 0.41
SNIP1-202ENST00000468040 SSRP1Q08945 709 aaKnown RBP17.6■□□□□ 0.41
SNIP1-202ENST00000468040 ST3GAL1Q11201 340 aa17.6■□□□□ 0.41
SNIP1-202ENST00000468040 PLS1Q14651 629 aa17.6■□□□□ 0.41
SNIP1-202ENST00000468040 QRICH1Q2TAL8 776 aa17.6■□□□□ 0.41
SNIP1-202ENST00000468040 POTEEQ6S8J3 1075 aa17.6■□□□□ 0.41
SNIP1-202ENST00000468040 C17orf99Q6UX52 265 aa17.6■□□□□ 0.41
SNIP1-202ENST00000468040 CPXCR1Q8N123 301 aa17.6■□□□□ 0.41
SNIP1-202ENST00000468040 AMNQ9BXJ7 453 aa17.6■□□□□ 0.41
SNIP1-202ENST00000468040 SLC26A6Q9BXS9 759 aa17.6■□□□□ 0.41
SNIP1-202ENST00000468040 SPATC1LQ9H0A9 340 aa17.6■□□□□ 0.41
SNIP1-202ENST00000468040 RAVER2Q9HCJ3 691 aaKnown RBP17.6■□□□□ 0.41
SNIP1-202ENST00000468040 TXNRD2Q9NNW7 524 aa17.6■□□□□ 0.41
SNIP1-202ENST00000468040 WBP1LQ9NX94 342 aa17.6■□□□□ 0.41
SNIP1-202ENST00000468040 CPA4Q9UI42 421 aa17.6■□□□□ 0.41
SNIP1-202ENST00000468040 V9GY48 417 aaPredicted RBP17.6■□□□□ 0.41
SNIP1-202ENST00000468040 STK36Q9NRP7 1315 aa17.6■□□□□ 0.41
SNIP1-202ENST00000468040 COL11A1P12107 1806 aaPredicted RBP17.6■□□□□ 0.41
SNIP1-202ENST00000468040 ZNF536O15090 1300 aa17.59■□□□□ 0.41
SNIP1-202ENST00000468040 CNMDO75829 334 aa17.59■□□□□ 0.41
SNIP1-202ENST00000468040 CTDNEP1O95476 244 aa17.59■□□□□ 0.41
SNIP1-202ENST00000468040 TBC1D8O95759 1140 aa17.59■□□□□ 0.41
SNIP1-202ENST00000468040 STAT3P40763 770 aa17.59■□□□□ 0.41
SNIP1-202ENST00000468040 SNRNP48Q6IEG0 339 aaKnown RBP17.59■□□□□ 0.41
SNIP1-202ENST00000468040 FBXO11Q86XK2 927 aa17.59■□□□□ 0.41
SNIP1-202ENST00000468040 NSUN7Q8NE18 718 aaKnown RBP17.59■□□□□ 0.41
SNIP1-202ENST00000468040 PIBF1Q8WXW3 757 aa17.59■□□□□ 0.41
SNIP1-202ENST00000468040 PHKBQ93100 1093 aa17.59■□□□□ 0.41
SNIP1-202ENST00000468040 CCPG1Q9ULG6 757 aa17.59■□□□□ 0.41
SNIP1-202ENST00000468040 PTPDC1A2A3K4 754 aa17.58■□□□□ 0.4
SNIP1-202ENST00000468040 hCG_1984214I3L0E3 225 aa17.58■□□□□ 0.4
SNIP1-202ENST00000468040 DEXIO95424 95 aa17.58■□□□□ 0.4
SNIP1-202ENST00000468040 SLC25A27O95847 323 aa17.58■□□□□ 0.4
SNIP1-202ENST00000468040 CUL4AQ13619 759 aa17.58■□□□□ 0.4
SNIP1-202ENST00000468040 BECN1Q14457 450 aa17.58■□□□□ 0.4
SNIP1-202ENST00000468040 PFKFB3Q16875 520 aaPredicted RBP17.58■□□□□ 0.4
SNIP1-202ENST00000468040 TKFCQ3LXA3 575 aa17.58■□□□□ 0.4
SNIP1-202ENST00000468040 NOM1Q5C9Z4 860 aaKnown RBP17.58■□□□□ 0.4
SNIP1-202ENST00000468040 RIOX2Q8IUF8 465 aa17.58■□□□□ 0.4
SNIP1-202ENST00000468040 ZNF713Q8N859 430 aaPredicted RBP17.58■□□□□ 0.4
SNIP1-202ENST00000468040 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.58■□□□□ 0.4
SNIP1-202ENST00000468040 ABCB11O95342 1321 aa17.57■□□□□ 0.4
SNIP1-202ENST00000468040 SCG2P13521 617 aa17.57■□□□□ 0.4
SNIP1-202ENST00000468040 ANP32AP39687 249 aaKnown RBP17.57■□□□□ 0.4
SNIP1-202ENST00000468040 HMGN5P82970 282 aaKnown RBP17.57■□□□□ 0.4
SNIP1-202ENST00000468040 CCAR1Q8IX12 1150 aaKnown RBP17.57■□□□□ 0.4
SNIP1-202ENST00000468040 SHCBP1Q8NEM2 672 aa17.57■□□□□ 0.4
SNIP1-202ENST00000468040 WASF1Q92558 559 aa17.57■□□□□ 0.4
SNIP1-202ENST00000468040 AGBL1Q96MI9 1066 aa17.57■□□□□ 0.4
SNIP1-202ENST00000468040 MOV10L1Q9BXT6 1211 aaKnown RBP17.57■□□□□ 0.4
SNIP1-202ENST00000468040 MROH8Q9H579 483 aa17.57■□□□□ 0.4
SNIP1-202ENST00000468040 ORC3Q9UBD5 711 aaPredicted RBP17.57■□□□□ 0.4
SNIP1-202ENST00000468040 hCG_1642624A0A1W2PR95 340 aa17.56■□□□□ 0.4
SNIP1-202ENST00000468040 PEX10O60683 326 aa17.56■□□□□ 0.4
SNIP1-202ENST00000468040 PPP1R11O60927 126 aaPredicted RBP17.56■□□□□ 0.4
SNIP1-202ENST00000468040 Q3C1V9 767 aa17.56■□□□□ 0.4
SNIP1-202ENST00000468040 USH1GQ495M9 461 aa17.56■□□□□ 0.4
SNIP1-202ENST00000468040 HEATR3Q7Z4Q2 680 aa17.56■□□□□ 0.4
SNIP1-202ENST00000468040 SMARCC2Q8TAQ2 1214 aa17.56■□□□□ 0.4
SNIP1-202ENST00000468040 INTS4Q96HW7 963 aaKnown RBP17.56■□□□□ 0.4
SNIP1-202ENST00000468040 R3HDMLQ9H3Y0 253 aa17.56■□□□□ 0.4
SNIP1-202ENST00000468040 PCDHA1Q9Y5I3 950 aa17.56■□□□□ 0.4
SNIP1-202ENST00000468040 MYH6P13533 1939 aa17.56■□□□□ 0.4
SNIP1-202ENST00000468040 BAZ2BQ9UIF8 2168 aaKnown RBP17.56■□□□□ 0.4
SNIP1-202ENST00000468040 GPR25O00155 361 aa17.55■□□□□ 0.4
SNIP1-202ENST00000468040 JAK2O60674 1132 aa17.55■□□□□ 0.4
SNIP1-202ENST00000468040 PPFIA3O75145 1194 aa17.55■□□□□ 0.4
SNIP1-202ENST00000468040 ALAS1P13196 640 aa17.55■□□□□ 0.4
SNIP1-202ENST00000468040 MAPK4P31152 587 aa17.55■□□□□ 0.4
SNIP1-202ENST00000468040 SLC4A3P48751 1232 aa17.55■□□□□ 0.4
SNIP1-202ENST00000468040 SP3Q02447 781 aa17.55■□□□□ 0.4
SNIP1-202ENST00000468040 NCAPG2Q86XI2 1143 aa17.55■□□□□ 0.4
SNIP1-202ENST00000468040 CHST13Q8NET6 341 aa17.55■□□□□ 0.4
SNIP1-202ENST00000468040 DDX11Q96FC9 970 aa17.55■□□□□ 0.4
SNIP1-202ENST00000468040 TSHZ2Q9NRE2 1034 aa17.55■□□□□ 0.4
SNIP1-202ENST00000468040 FBXO40Q9UH90 709 aa17.55■□□□□ 0.4
SNIP1-202ENST00000468040 MRPL11Q9Y3B7 192 aaKnown RBP17.55■□□□□ 0.4
SNIP1-202ENST00000468040 KIF3AQ9Y496 699 aa17.55■□□□□ 0.4
SNIP1-202ENST00000468040 RIPK3Q9Y572 518 aa17.55■□□□□ 0.4
SNIP1-202ENST00000468040 HSP90AA1P07900 732 aaKnown RBP17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms