RNA–Protein interactions for RNA: ENST00000467717.5

VARS2-204, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 863 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-204ENST00000467717 ATP2A1O14983 1001 aa19.8■□□□□ 0.76
VARS2-204ENST00000467717 CDKL5O76039 1030 aa19.8■□□□□ 0.76
VARS2-204ENST00000467717 TBC1D8O95759 1140 aa19.8■□□□□ 0.76
VARS2-204ENST00000467717 IFNAR1P17181 557 aa19.8■□□□□ 0.76
VARS2-204ENST00000467717 OAZ1P54368 228 aa19.8■□□□□ 0.76
VARS2-204ENST00000467717 TMEM132BQ14DG7 1078 aa19.8■□□□□ 0.76
VARS2-204ENST00000467717 CDC37Q16543 378 aaPredicted RBP19.8■□□□□ 0.76
VARS2-204ENST00000467717 FAM110CQ1W6H9 321 aa19.8■□□□□ 0.76
VARS2-204ENST00000467717 C17orf99Q6UX52 265 aa19.8■□□□□ 0.76
VARS2-204ENST00000467717 ANKRD13CQ8N6S4 541 aa19.8■□□□□ 0.76
VARS2-204ENST00000467717 GPRC5AQ8NFJ5 357 aa19.8■□□□□ 0.76
VARS2-204ENST00000467717 MTMR8Q96EF0 704 aa19.8■□□□□ 0.76
VARS2-204ENST00000467717 RRP36Q96EU6 259 aaKnown RBP19.8■□□□□ 0.76
VARS2-204ENST00000467717 TXNRD2Q9NNW7 524 aa19.8■□□□□ 0.76
VARS2-204ENST00000467717 BTBD7Q9P203 1132 aa19.8■□□□□ 0.76
VARS2-204ENST00000467717 MORF4L1Q9UBU8 362 aa19.8■□□□□ 0.76
VARS2-204ENST00000467717 ZBTB5O15062 677 aa19.79■□□□□ 0.76
VARS2-204ENST00000467717 CNMDO75829 334 aa19.79■□□□□ 0.76
VARS2-204ENST00000467717 BCRP11274 1271 aa19.79■□□□□ 0.76
VARS2-204ENST00000467717 SNAP25P60880 206 aa19.79■□□□□ 0.76
VARS2-204ENST00000467717 CCDC174Q6PII3 467 aa19.79■□□□□ 0.76
VARS2-204ENST00000467717 HOMER1Q86YM7 354 aa19.79■□□□□ 0.76
VARS2-204ENST00000467717 PIGSQ96S52 555 aa19.79■□□□□ 0.76
VARS2-204ENST00000467717 TEX13BQ9BXU2 312 aa19.79■□□□□ 0.76
VARS2-204ENST00000467717 R3HDMLQ9H3Y0 253 aa19.79■□□□□ 0.76
VARS2-204ENST00000467717 PNMA2Q9UL42 364 aa19.79■□□□□ 0.76
VARS2-204ENST00000467717 ZNF214Q9UL59 606 aaPredicted RBP19.79■□□□□ 0.76
VARS2-204ENST00000467717 CNTNAP5Q8WYK1 1306 aa19.78■□□□□ 0.76
VARS2-204ENST00000467717 CASP8AP2Q9UKL3 1982 aa19.78■□□□□ 0.76
VARS2-204ENST00000467717 PNMA6FA0A0J9YX94 578 aa19.78■□□□□ 0.76
VARS2-204ENST00000467717 ICAM1P05362 532 aa19.78■□□□□ 0.76
VARS2-204ENST00000467717 STAT3P40763 770 aa19.78■□□□□ 0.76
VARS2-204ENST00000467717 ERVK-9P63128 1117 aa19.78■□□□□ 0.76
VARS2-204ENST00000467717 ERVK-24P63145 666 aa19.78■□□□□ 0.76
VARS2-204ENST00000467717 ST3GAL1Q11201 340 aa19.78■□□□□ 0.76
VARS2-204ENST00000467717 QRICH1Q2TAL8 776 aa19.78■□□□□ 0.76
VARS2-204ENST00000467717 CCDC83Q8IWF9 413 aa19.78■□□□□ 0.76
VARS2-204ENST00000467717 CPXCR1Q8N123 301 aa19.78■□□□□ 0.76
VARS2-204ENST00000467717 SPATC1LQ9H0A9 340 aa19.78■□□□□ 0.76
VARS2-204ENST00000467717 RAVER2Q9HCJ3 691 aaKnown RBP19.78■□□□□ 0.76
VARS2-204ENST00000467717 RBM27Q9P2N5 1060 aaKnown RBP19.78■□□□□ 0.76
VARS2-204ENST00000467717 SEC63Q9UGP8 760 aaKnown RBP19.78■□□□□ 0.76
VARS2-204ENST00000467717 V9GY48 417 aaPredicted RBP19.78■□□□□ 0.76
VARS2-204ENST00000467717 ZNF536O15090 1300 aa19.77■□□□□ 0.76
VARS2-204ENST00000467717 TNRC18O15417 2968 aaPredicted RBP19.77■□□□□ 0.76
VARS2-204ENST00000467717 PEX10O60683 326 aa19.77■□□□□ 0.76
VARS2-204ENST00000467717 CCNA1P78396 465 aa19.77■□□□□ 0.76
VARS2-204ENST00000467717 AKAP17AQ02040 695 aaKnown RBP19.77■□□□□ 0.76
VARS2-204ENST00000467717 PLS1Q14651 629 aa19.77■□□□□ 0.76
VARS2-204ENST00000467717 Q3C1V9 767 aa19.77■□□□□ 0.76
VARS2-204ENST00000467717 HSCBQ8IWL3 235 aa19.77■□□□□ 0.76
VARS2-204ENST00000467717 TRIM22Q8IYM9 498 aa19.77■□□□□ 0.76
VARS2-204ENST00000467717 PIBF1Q8WXW3 757 aa19.77■□□□□ 0.76
VARS2-204ENST00000467717 PHKBQ93100 1093 aa19.77■□□□□ 0.76
VARS2-204ENST00000467717 RNF26Q9BY78 433 aaPredicted RBP19.77■□□□□ 0.76
VARS2-204ENST00000467717 K7ELQ4 463 aaPredicted RBP19.76■□□□□ 0.75
VARS2-204ENST00000467717 PRPF3O43395 683 aaKnown RBP19.76■□□□□ 0.75
VARS2-204ENST00000467717 CTDNEP1O95476 244 aa19.76■□□□□ 0.75
VARS2-204ENST00000467717 TRAF1Q13077 416 aa19.76■□□□□ 0.75
VARS2-204ENST00000467717 SNRNP48Q6IEG0 339 aaKnown RBP19.76■□□□□ 0.75
VARS2-204ENST00000467717 RIOX2Q8IUF8 465 aa19.76■□□□□ 0.75
VARS2-204ENST00000467717 AGBL1Q96MI9 1066 aa19.76■□□□□ 0.75
VARS2-204ENST00000467717 LLPHQ9BRT6 129 aaKnown RBP19.76■□□□□ 0.75
VARS2-204ENST00000467717 AMNQ9BXJ7 453 aa19.76■□□□□ 0.75
VARS2-204ENST00000467717 SLC26A6Q9BXS9 759 aa19.76■□□□□ 0.75
VARS2-204ENST00000467717 CCPG1Q9ULG6 757 aa19.76■□□□□ 0.75
VARS2-204ENST00000467717 hCG_1642624A0A1W2PR95 340 aa19.75■□□□□ 0.75
VARS2-204ENST00000467717 FMNL1O95466 1100 aaPredicted RBP19.75■□□□□ 0.75
VARS2-204ENST00000467717 COPB2P35606 906 aa19.75■□□□□ 0.75
VARS2-204ENST00000467717 SSRP1Q08945 709 aaKnown RBP19.75■□□□□ 0.75
VARS2-204ENST00000467717 NOM1Q5C9Z4 860 aaKnown RBP19.75■□□□□ 0.75
VARS2-204ENST00000467717 FBXO11Q86XK2 927 aa19.75■□□□□ 0.75
VARS2-204ENST00000467717 MOV10L1Q9BXT6 1211 aaKnown RBP19.75■□□□□ 0.75
VARS2-204ENST00000467717 GPR25O00155 361 aa19.74■□□□□ 0.75
VARS2-204ENST00000467717 PPFIA3O75145 1194 aa19.74■□□□□ 0.75
VARS2-204ENST00000467717 SLC25A27O95847 323 aa19.74■□□□□ 0.75
VARS2-204ENST00000467717 TKFCQ3LXA3 575 aa19.74■□□□□ 0.75
VARS2-204ENST00000467717 NSUN7Q8NE18 718 aaKnown RBP19.74■□□□□ 0.75
VARS2-204ENST00000467717 SHCBP1Q8NEM2 672 aa19.74■□□□□ 0.75
VARS2-204ENST00000467717 STK36Q9NRP7 1315 aa19.74■□□□□ 0.75
VARS2-204ENST00000467717 PTPDC1A2A3K4 754 aa19.73■□□□□ 0.75
VARS2-204ENST00000467717 PPP1R11O60927 126 aaPredicted RBP19.73■□□□□ 0.75
VARS2-204ENST00000467717 DEXIO95424 95 aa19.73■□□□□ 0.75
VARS2-204ENST00000467717 ERCC3P19447 782 aa19.73■□□□□ 0.75
VARS2-204ENST00000467717 SLC4A3P48751 1232 aa19.73■□□□□ 0.75
VARS2-204ENST00000467717 SP3Q02447 781 aa19.73■□□□□ 0.75
VARS2-204ENST00000467717 CUL4AQ13619 759 aa19.73■□□□□ 0.75
VARS2-204ENST00000467717 PFKFB3Q16875 520 aaPredicted RBP19.73■□□□□ 0.75
VARS2-204ENST00000467717 NCAPG2Q86XI2 1143 aa19.73■□□□□ 0.75
VARS2-204ENST00000467717 CCAR1Q8IX12 1150 aaKnown RBP19.73■□□□□ 0.75
VARS2-204ENST00000467717 RIPK3Q9Y572 518 aa19.73■□□□□ 0.75
VARS2-204ENST00000467717 PCDHA1Q9Y5I3 950 aa19.73■□□□□ 0.75
VARS2-204ENST00000467717 JAK2O60674 1132 aa19.72■□□□□ 0.75
VARS2-204ENST00000467717 ALAS1P13196 640 aa19.72■□□□□ 0.75
VARS2-204ENST00000467717 PKN1Q16512 942 aa19.72■□□□□ 0.75
VARS2-204ENST00000467717 USH1GQ495M9 461 aa19.72■□□□□ 0.75
VARS2-204ENST00000467717 CHST13Q8NET6 341 aa19.72■□□□□ 0.75
VARS2-204ENST00000467717 SMARCC2Q8TAQ2 1214 aa19.72■□□□□ 0.75
VARS2-204ENST00000467717 TRERF1Q96PN7 1200 aa19.72■□□□□ 0.75
VARS2-204ENST00000467717 PORCNQ9H237 461 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms