RNA–Protein interactions for RNA: ENST00000467318.5

DDX56-208, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,665 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-208ENST00000467318 ZBTB5O15062 677 aa17.06■□□□□ 0.32
DDX56-208ENST00000467318 HSP90AA1P07900 732 aaKnown RBP17.06■□□□□ 0.32
DDX56-208ENST00000467318 CYP2C8P10632 490 aa17.06■□□□□ 0.32
DDX56-208ENST00000467318 OAZ1P54368 228 aa17.06■□□□□ 0.32
DDX56-208ENST00000467318 HMGN5P82970 282 aaKnown RBP17.06■□□□□ 0.32
DDX56-208ENST00000467318 TRAF1Q13077 416 aa17.06■□□□□ 0.32
DDX56-208ENST00000467318 SLC35G1Q2M3R5 365 aa17.06■□□□□ 0.32
DDX56-208ENST00000467318 NSUN7Q8NE18 718 aaKnown RBP17.06■□□□□ 0.32
DDX56-208ENST00000467318 GBP4Q96PP9 640 aa17.06■□□□□ 0.32
DDX56-208ENST00000467318 ZFYVE28Q9HCC9 887 aa17.06■□□□□ 0.32
DDX56-208ENST00000467318 V9GY48 417 aaPredicted RBP17.06■□□□□ 0.32
DDX56-208ENST00000467318 RLFQ13129 1914 aa17.06■□□□□ 0.32
DDX56-208ENST00000467318 PNMA6FA0A0J9YX94 578 aa17.05■□□□□ 0.32
DDX56-208ENST00000467318 ATP2A1O14983 1001 aa17.05■□□□□ 0.32
DDX56-208ENST00000467318 CA12O43570 354 aa17.05■□□□□ 0.32
DDX56-208ENST00000467318 FMNL1O95466 1100 aaPredicted RBP17.05■□□□□ 0.32
DDX56-208ENST00000467318 CTDNEP1O95476 244 aa17.05■□□□□ 0.32
DDX56-208ENST00000467318 CDC37Q16543 378 aaPredicted RBP17.05■□□□□ 0.32
DDX56-208ENST00000467318 PHKBQ93100 1093 aa17.05■□□□□ 0.32
DDX56-208ENST00000467318 PIGSQ96S52 555 aa17.05■□□□□ 0.32
DDX56-208ENST00000467318 SLC26A6Q9BXS9 759 aa17.05■□□□□ 0.32
DDX56-208ENST00000467318 RABGAP1Q9Y3P9 1069 aa17.05■□□□□ 0.32
DDX56-208ENST00000467318 PARP14Q460N5 1801 aa17.05■□□□□ 0.32
DDX56-208ENST00000467318 BAZ2BQ9UIF8 2168 aaKnown RBP17.05■□□□□ 0.32
DDX56-208ENST00000467318 STK36Q9NRP7 1315 aa17.04■□□□□ 0.32
DDX56-208ENST00000467318 DEXIO95424 95 aa17.04■□□□□ 0.32
DDX56-208ENST00000467318 HOMER1Q86YM7 354 aa17.04■□□□□ 0.32
DDX56-208ENST00000467318 SMARCC2Q8TAQ2 1214 aa17.04■□□□□ 0.32
DDX56-208ENST00000467318 PTPDC1A2A3K4 754 aa17.04■□□□□ 0.32
DDX56-208ENST00000467318 TLR2O60603 784 aa17.04■□□□□ 0.32
DDX56-208ENST00000467318 DTNBO60941 627 aa17.04■□□□□ 0.32
DDX56-208ENST00000467318 ICAM1P05362 532 aa17.04■□□□□ 0.32
DDX56-208ENST00000467318 MAP2K1Q02750 393 aaPredicted RBP17.04■□□□□ 0.32
DDX56-208ENST00000467318 QRICH1Q2TAL8 776 aa17.04■□□□□ 0.32
DDX56-208ENST00000467318 SKOR2Q2VWA4 1001 aaPredicted RBP17.04■□□□□ 0.32
DDX56-208ENST00000467318 DNAJC5GQ8N7S2 189 aa17.04■□□□□ 0.32
DDX56-208ENST00000467318 REPS2Q8NFH8 660 aa17.04■□□□□ 0.32
DDX56-208ENST00000467318 AMNQ9BXJ7 453 aa17.04■□□□□ 0.32
DDX56-208ENST00000467318 CFHR5Q9BXR6 569 aa17.04■□□□□ 0.32
DDX56-208ENST00000467318 THSD7BQ9C0I4 1608 aa17.03■□□□□ 0.32
DDX56-208ENST00000467318 hCG_1984214I3L0E3 225 aa17.03■□□□□ 0.32
DDX56-208ENST00000467318 PEX10O60683 326 aa17.03■□□□□ 0.32
DDX56-208ENST00000467318 TMEM132BQ14DG7 1078 aa17.03■□□□□ 0.32
DDX56-208ENST00000467318 PFKFB3Q16875 520 aaPredicted RBP17.03■□□□□ 0.32
DDX56-208ENST00000467318 ZNF713Q8N859 430 aaPredicted RBP17.03■□□□□ 0.32
DDX56-208ENST00000467318 WASF1Q92558 559 aa17.03■□□□□ 0.32
DDX56-208ENST00000467318 TEX13BQ9BXU2 312 aa17.03■□□□□ 0.32
DDX56-208ENST00000467318 ORC3Q9UBD5 711 aaPredicted RBP17.03■□□□□ 0.32
DDX56-208ENST00000467318 RBPJLQ9UBG7 517 aa17.03■□□□□ 0.32
DDX56-208ENST00000467318 ZNF214Q9UL59 606 aaPredicted RBP17.03■□□□□ 0.32
DDX56-208ENST00000467318 KIF3AQ9Y496 699 aa17.03■□□□□ 0.32
DDX56-208ENST00000467318 ZNF536O15090 1300 aa17.02■□□□□ 0.32
DDX56-208ENST00000467318 SCG2P13521 617 aa17.02■□□□□ 0.32
DDX56-208ENST00000467318 STAT3P40763 770 aa17.02■□□□□ 0.32
DDX56-208ENST00000467318 CRHR2Q13324 411 aa17.02■□□□□ 0.32
DDX56-208ENST00000467318 FAM110CQ1W6H9 321 aa17.02■□□□□ 0.32
DDX56-208ENST00000467318 FBXO11Q86XK2 927 aa17.02■□□□□ 0.32
DDX56-208ENST00000467318 CPXCR1Q8N123 301 aa17.02■□□□□ 0.32
DDX56-208ENST00000467318 PIBF1Q8WXW3 757 aa17.02■□□□□ 0.32
DDX56-208ENST00000467318 PAGR1Q9BTK6 254 aa17.02■□□□□ 0.32
DDX56-208ENST00000467318 SMC3Q9UQE7 1217 aa17.02■□□□□ 0.32
DDX56-208ENST00000467318 JAK2O60674 1132 aa17.01■□□□□ 0.31
DDX56-208ENST00000467318 PPFIA3O75145 1194 aa17.01■□□□□ 0.31
DDX56-208ENST00000467318 SNAP25P60880 206 aa17.01■□□□□ 0.31
DDX56-208ENST00000467318 ERVK-9P63128 1117 aa17.01■□□□□ 0.31
DDX56-208ENST00000467318 ERVK-24P63145 666 aa17.01■□□□□ 0.31
DDX56-208ENST00000467318 PKN1Q16512 942 aa17.01■□□□□ 0.31
DDX56-208ENST00000467318 CCDC174Q6PII3 467 aa17.01■□□□□ 0.31
DDX56-208ENST00000467318 POTEEQ6S8J3 1075 aa17.01■□□□□ 0.31
DDX56-208ENST00000467318 ANKRD13CQ8N6S4 541 aa17.01■□□□□ 0.31
DDX56-208ENST00000467318 GPRC5AQ8NFJ5 357 aa17.01■□□□□ 0.31
DDX56-208ENST00000467318 SPATC1LQ9H0A9 340 aa17.01■□□□□ 0.31
DDX56-208ENST00000467318 RAVER2Q9HCJ3 691 aaKnown RBP17.01■□□□□ 0.31
DDX56-208ENST00000467318 BTBD7Q9P203 1132 aa17.01■□□□□ 0.31
DDX56-208ENST00000467318 MORF4L1Q9UBU8 362 aa17.01■□□□□ 0.31
DDX56-208ENST00000467318 ADGRA2Q96PE1 1338 aa17.01■□□□□ 0.31
DDX56-208ENST00000467318 hCG_1642624A0A1W2PR95 340 aa17.01■□□□□ 0.31
DDX56-208ENST00000467318 FDPSP14324 419 aaKnown RBP17.01■□□□□ 0.31
DDX56-208ENST00000467318 COPB2P35606 906 aa17.01■□□□□ 0.31
DDX56-208ENST00000467318 CCNA1P78396 465 aa17.01■□□□□ 0.31
DDX56-208ENST00000467318 C17orf99Q6UX52 265 aa17.01■□□□□ 0.31
DDX56-208ENST00000467318 FAM177A1Q8N128 213 aaPredicted RBP17.01■□□□□ 0.31
DDX56-208ENST00000467318 FAM184AQ8NB25 1140 aa17.01■□□□□ 0.31
DDX56-208ENST00000467318 DDX11Q96FC9 970 aa17.01■□□□□ 0.31
DDX56-208ENST00000467318 BEGAINQ9BUH8 593 aa17.01■□□□□ 0.31
DDX56-208ENST00000467318 TXNRD2Q9NNW7 524 aa17.01■□□□□ 0.31
DDX56-208ENST00000467318 RNF186Q9NXI6 227 aa17.01■□□□□ 0.31
DDX56-208ENST00000467318 SAGE1Q9NXZ1 904 aa17.01■□□□□ 0.31
DDX56-208ENST00000467318 CCPG1Q9ULG6 757 aa17.01■□□□□ 0.31
DDX56-208ENST00000467318 PCDHA1Q9Y5I3 950 aa17.01■□□□□ 0.31
DDX56-208ENST00000467318 TRAK2O60296 914 aa17■□□□□ 0.31
DDX56-208ENST00000467318 TRPA1O75762 1119 aa17■□□□□ 0.31
DDX56-208ENST00000467318 CNMDO75829 334 aa17■□□□□ 0.31
DDX56-208ENST00000467318 SLC25A27O95847 323 aa17■□□□□ 0.31
DDX56-208ENST00000467318 BCRP11274 1271 aa17■□□□□ 0.31
DDX56-208ENST00000467318 XBP1P17861 261 aa17■□□□□ 0.31
DDX56-208ENST00000467318 PLS1Q14651 629 aa17■□□□□ 0.31
DDX56-208ENST00000467318 TKFCQ3LXA3 575 aa17■□□□□ 0.31
DDX56-208ENST00000467318 SNRNP48Q6IEG0 339 aaKnown RBP17■□□□□ 0.31
DDX56-208ENST00000467318 RIOX2Q8IUF8 465 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms