RNA–Protein interactions for RNA: ENST00000466171.1

CCDC93-205, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-205ENST00000466171 MCM4P33991 863 aa4.14□□□□□ -1.75
CCDC93-205ENST00000466171 KCNC1P48547 511 aa4.14□□□□□ -1.75
CCDC93-205ENST00000466171 NFKB2Q00653 900 aa4.14□□□□□ -1.75
CCDC93-205ENST00000466171 CAP1Q01518 475 aa4.14□□□□□ -1.75
CCDC93-205ENST00000466171 CBX2Q14781 532 aaPredicted RBP4.14□□□□□ -1.75
CCDC93-205ENST00000466171 TARBP2Q15633 366 aaKnown RBP4.14□□□□□ -1.75
CCDC93-205ENST00000466171 SKOR2Q2VWA4 1001 aaPredicted RBP4.14□□□□□ -1.75
CCDC93-205ENST00000466171 HLA-DQA1Q5Y7H0 255 aa4.14□□□□□ -1.75
CCDC93-205ENST00000466171 CWF19L1Q69YN2 538 aaKnown RBP4.14□□□□□ -1.75
CCDC93-205ENST00000466171 ZC3H14Q6PJT7 736 aaKnown RBP4.14□□□□□ -1.75
CCDC93-205ENST00000466171 GK5Q6ZS86 529 aa4.14□□□□□ -1.75
CCDC93-205ENST00000466171 FRMD5Q7Z6J6 570 aa4.14□□□□□ -1.75
CCDC93-205ENST00000466171 FBXO33Q7Z6M2 555 aa4.14□□□□□ -1.75
CCDC93-205ENST00000466171 SLCO6A1Q86UG4 719 aa4.14□□□□□ -1.75
CCDC93-205ENST00000466171 JAMLQ86YT9 394 aa4.14□□□□□ -1.75
CCDC93-205ENST00000466171 IGDCC3Q8IVU1 814 aa4.14□□□□□ -1.75
CCDC93-205ENST00000466171 TMEFF1Q8IYR6 380 aa4.14□□□□□ -1.75
CCDC93-205ENST00000466171 REXO1Q8N1G1 1221 aaKnown RBP4.14□□□□□ -1.75
CCDC93-205ENST00000466171 RGS22Q8NE09 1264 aa4.14□□□□□ -1.75
CCDC93-205ENST00000466171 DHRS1Q96LJ7 313 aa4.14□□□□□ -1.75
CCDC93-205ENST00000466171 TMPRSS5Q9H3S3 457 aa4.14□□□□□ -1.75
CCDC93-205ENST00000466171 EPB41L4AQ9HCS5 686 aaPredicted RBP4.14□□□□□ -1.75
CCDC93-205ENST00000466171 TNFRSF12AQ9NP84 129 aa4.14□□□□□ -1.75
CCDC93-205ENST00000466171 KCNQ5Q9NR82 932 aa4.14□□□□□ -1.75
CCDC93-205ENST00000466171 GFOD1Q9NXC2 390 aa4.14□□□□□ -1.75
CCDC93-205ENST00000466171 GREM1O60565 184 aa4.13□□□□□ -1.75
CCDC93-205ENST00000466171 VAV1P15498 845 aa4.13□□□□□ -1.75
CCDC93-205ENST00000466171 NME1P15531 152 aaKnown RBP4.13□□□□□ -1.75
CCDC93-205ENST00000466171 PLP2Q04941 152 aa4.13□□□□□ -1.75
CCDC93-205ENST00000466171 APOBRQ0VD83 1088 aa4.13□□□□□ -1.75
CCDC93-205ENST00000466171 AUHQ13825 339 aaKnown RBP4.13□□□□□ -1.75
CCDC93-205ENST00000466171 SPATS1Q496A3 300 aa4.13□□□□□ -1.75
CCDC93-205ENST00000466171 SEZ6Q53EL9 994 aa4.13□□□□□ -1.75
CCDC93-205ENST00000466171 DNAJC14Q6Y2X3 702 aaPredicted RBP4.13□□□□□ -1.75
CCDC93-205ENST00000466171 ERMP1Q7Z2K6 904 aa4.13□□□□□ -1.75
CCDC93-205ENST00000466171 ZNF296Q8WUU4 475 aaPredicted RBP4.13□□□□□ -1.75
CCDC93-205ENST00000466171 SLC6A18Q96N87 628 aa4.13□□□□□ -1.75
CCDC93-205ENST00000466171 AP5S1Q9NUS5 200 aa4.13□□□□□ -1.75
CCDC93-205ENST00000466171 IMPACTQ9P2X3 320 aa4.13□□□□□ -1.75
CCDC93-205ENST00000466171 PCDHA5Q9Y5H7 936 aa4.13□□□□□ -1.75
CCDC93-205ENST00000466171 NOP2P46087 812 aaKnown RBP4.12□□□□□ -1.75
CCDC93-205ENST00000466171 MAPKAPK2P49137 400 aa4.12□□□□□ -1.75
CCDC93-205ENST00000466171 NCKAP1LP55160 1127 aa4.12□□□□□ -1.75
CCDC93-205ENST00000466171 KIR3DS1Q14943 382 aa4.12□□□□□ -1.75
CCDC93-205ENST00000466171 CYP2R1Q6VVX0 501 aa4.12□□□□□ -1.75
CCDC93-205ENST00000466171 RPTNQ6XPR3 784 aa4.12□□□□□ -1.75
CCDC93-205ENST00000466171 HS2ST1Q7LGA3 356 aa4.12□□□□□ -1.75
CCDC93-205ENST00000466171 CCDC144CPQ8IYA2 1237 aa4.12□□□□□ -1.75
CCDC93-205ENST00000466171 NKD1Q969G9 470 aa4.12□□□□□ -1.75
CCDC93-205ENST00000466171 ANTXR1Q9H6X2 564 aa4.12□□□□□ -1.75
CCDC93-205ENST00000466171 GGT7Q9UJ14 662 aa4.12□□□□□ -1.75
CCDC93-205ENST00000466171 MINPP1Q9UNW1 487 aa4.12□□□□□ -1.75
CCDC93-205ENST00000466171 FAN1Q9Y2M0 1017 aa4.12□□□□□ -1.75
CCDC93-205ENST00000466171 MEIS3P2A8K0S8 358 aa4.11□□□□□ -1.75
CCDC93-205ENST00000466171 TNFRSF10CO14798 259 aa4.11□□□□□ -1.75
CCDC93-205ENST00000466171 CYBBP04839 570 aa4.11□□□□□ -1.75
CCDC93-205ENST00000466171 GSTM1P09488 218 aa4.11□□□□□ -1.75
CCDC93-205ENST00000466171 CLCQ05315 142 aa4.11□□□□□ -1.75
CCDC93-205ENST00000466171 PLEKHN1Q494U1 663 aaPredicted RBP4.11□□□□□ -1.75
CCDC93-205ENST00000466171 NOL9Q5SY16 702 aaKnown RBP4.11□□□□□ -1.75
CCDC93-205ENST00000466171 PAQR3Q6TCH7 311 aa4.11□□□□□ -1.75
CCDC93-205ENST00000466171 CRTC3Q6UUV7 619 aa4.11□□□□□ -1.75
CCDC93-205ENST00000466171 C7orf61Q8IZ16 206 aa4.11□□□□□ -1.75
CCDC93-205ENST00000466171 SYT8Q8NBV8 401 aa4.11□□□□□ -1.75
CCDC93-205ENST00000466171 SMARCC1Q92922 1105 aaPredicted RBP4.11□□□□□ -1.75
CCDC93-205ENST00000466171 JMJD8Q96S16 334 aa4.11□□□□□ -1.75
CCDC93-205ENST00000466171 BDH2Q9BUT1 245 aa4.11□□□□□ -1.75
CCDC93-205ENST00000466171 ADAM7Q9H2U9 754 aa4.11□□□□□ -1.75
CCDC93-205ENST00000466171 COPRSQ9NQ92 184 aa4.11□□□□□ -1.75
CCDC93-205ENST00000466171 USP40Q9NVE5 1235 aa4.11□□□□□ -1.75
CCDC93-205ENST00000466171 DBR1Q9UK59 544 aaKnown RBP4.11□□□□□ -1.75
CCDC93-205ENST00000466171 IMPDH2P12268 514 aa4.1□□□□□ -1.75
CCDC93-205ENST00000466171 CTSKP43235 329 aa4.1□□□□□ -1.75
CCDC93-205ENST00000466171 CRKP46108 304 aa4.1□□□□□ -1.75
CCDC93-205ENST00000466171 LIMS1P48059 325 aa4.1□□□□□ -1.75
CCDC93-205ENST00000466171 ZNF200P98182 395 aaPredicted RBP4.1□□□□□ -1.75
CCDC93-205ENST00000466171 MVKQ03426 396 aa4.1□□□□□ -1.75
CCDC93-205ENST00000466171 BICRALQ6AI39 1079 aa4.1□□□□□ -1.75
CCDC93-205ENST00000466171 TMEM192Q8IY95 271 aa4.1□□□□□ -1.75
CCDC93-205ENST00000466171 UBP1Q9NZI7 540 aa4.1□□□□□ -1.75
CCDC93-205ENST00000466171 SUCOQ9UBS9 1254 aaKnown RBP4.1□□□□□ -1.75
CCDC93-205ENST00000466171 PALD1Q9ULE6 856 aa4.1□□□□□ -1.75
CCDC93-205ENST00000466171 TIMELESSQ9UNS1 1208 aa4.1□□□□□ -1.75
CCDC93-205ENST00000466171 IRS2Q9Y4H2 1338 aa4.1□□□□□ -1.75
CCDC93-205ENST00000466171 SRGAP3O43295 1099 aa4.09□□□□□ -1.75
CCDC93-205ENST00000466171 TBC1D8O95759 1140 aa4.09□□□□□ -1.75
CCDC93-205ENST00000466171 DBHP09172 617 aa4.09□□□□□ -1.75
CCDC93-205ENST00000466171 MSL3P1P0C860 447 aa4.09□□□□□ -1.75
CCDC93-205ENST00000466171 PDIA4P13667 645 aaKnown RBP4.09□□□□□ -1.75
CCDC93-205ENST00000466171 SLURP1P55000 103 aa4.09□□□□□ -1.75
CCDC93-205ENST00000466171 RBM10P98175 930 aaKnown RBP4.09□□□□□ -1.75
CCDC93-205ENST00000466171 ZXDCQ2QGD7 858 aaPredicted RBP4.09□□□□□ -1.75
CCDC93-205ENST00000466171 ZNF326Q5BKZ1 582 aaKnown RBP4.09□□□□□ -1.75
CCDC93-205ENST00000466171 RTP2Q5QGT7 225 aa4.09□□□□□ -1.75
CCDC93-205ENST00000466171 UBXN11Q5T124 520 aa4.09□□□□□ -1.75
CCDC93-205ENST00000466171 INTS3Q68E01 1043 aaKnown RBP4.09□□□□□ -1.75
CCDC93-205ENST00000466171 USP48Q86UV5 1035 aa4.09□□□□□ -1.75
CCDC93-205ENST00000466171 TP53I13Q8NBR0 393 aaPredicted RBP4.09□□□□□ -1.75
CCDC93-205ENST00000466171 TMEM52Q8NDY8 209 aa4.09□□□□□ -1.75
CCDC93-205ENST00000466171 SLC9A7Q96T83 725 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms