RNA–Protein interactions for RNA: ENST00000463908.2

LMNB1-204, Transcript of lamin B1, humanhuman

TSL 4

Gene LMNB1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-204ENST00000463908 CALM1P0DP23 149 aa22.06■■□□□ 1.12
LMNB1-204ENST00000463908 CALM2P0DP24 149 aa22.06■■□□□ 1.12
LMNB1-204ENST00000463908 CALM3P0DP25 149 aa22.06■■□□□ 1.12
LMNB1-204ENST00000463908 ARHGEF6Q15052 776 aa22.06■■□□□ 1.12
LMNB1-204ENST00000463908 SNRNP48Q6IEG0 339 aaKnown RBP22.06■■□□□ 1.12
LMNB1-204ENST00000463908 PLEKHH3Q7Z736 793 aa22.06■■□□□ 1.12
LMNB1-204ENST00000463908 LARP6Q9BRS8 491 aaKnown RBP22.06■■□□□ 1.12
LMNB1-204ENST00000463908 TEX13BQ9BXU2 312 aa22.06■■□□□ 1.12
LMNB1-204ENST00000463908 ALDH8A1Q9H2A2 487 aaPredicted RBP22.06■■□□□ 1.12
LMNB1-204ENST00000463908 RIOX1Q9H6W3 641 aa22.06■■□□□ 1.12
LMNB1-204ENST00000463908 FAM217BQ9NTX9 383 aaPredicted RBP22.06■■□□□ 1.12
LMNB1-204ENST00000463908 SRRDQ9UH36 339 aa22.06■■□□□ 1.12
LMNB1-204ENST00000463908 HPS5Q9UPZ3 1129 aa22.06■■□□□ 1.12
LMNB1-204ENST00000463908 COL11A1P12107 1806 aaPredicted RBP22.06■■□□□ 1.12
LMNB1-204ENST00000463908 ZBTB43O43298 467 aa22.05■■□□□ 1.12
LMNB1-204ENST00000463908 SLC25A27O95847 323 aa22.05■■□□□ 1.12
LMNB1-204ENST00000463908 TAL1P17542 331 aaPredicted RBP22.05■■□□□ 1.12
LMNB1-204ENST00000463908 SLC4A3P48751 1232 aa22.05■■□□□ 1.12
LMNB1-204ENST00000463908 SYNE3Q6ZMZ3 975 aa22.05■■□□□ 1.12
LMNB1-204ENST00000463908 MICU3Q86XE3 530 aa22.05■■□□□ 1.12
LMNB1-204ENST00000463908 NCAPG2Q86XI2 1143 aa22.05■■□□□ 1.12
LMNB1-204ENST00000463908 CTCFLQ8NI51 663 aaPredicted RBP22.05■■□□□ 1.12
LMNB1-204ENST00000463908 MTMR8Q96EF0 704 aa22.05■■□□□ 1.12
LMNB1-204ENST00000463908 MROH8Q9H579 483 aa22.05■■□□□ 1.12
LMNB1-204ENST00000463908 PTPN22Q9Y2R2 807 aa22.05■■□□□ 1.12
LMNB1-204ENST00000463908 CTDP1Q9Y5B0 961 aaPredicted RBP22.05■■□□□ 1.12
LMNB1-204ENST00000463908 PLEKHA8P1O95397 391 aa22.04■■□□□ 1.12
LMNB1-204ENST00000463908 ICAM1P05362 532 aa22.04■■□□□ 1.12
LMNB1-204ENST00000463908 PTPREP23469 700 aa22.04■■□□□ 1.12
LMNB1-204ENST00000463908 PRKCZQ05513 592 aa22.04■■□□□ 1.12
LMNB1-204ENST00000463908 MORN1Q5T089 497 aa22.04■■□□□ 1.12
LMNB1-204ENST00000463908 CCAR1Q8IX12 1150 aaKnown RBP22.04■■□□□ 1.12
LMNB1-204ENST00000463908 CMTR1Q8N1G2 835 aaKnown RBP22.04■■□□□ 1.12
LMNB1-204ENST00000463908 SRBD1Q8N5C6 995 aaKnown RBP22.04■■□□□ 1.12
LMNB1-204ENST00000463908 USP6NLQ92738 828 aa22.04■■□□□ 1.12
LMNB1-204ENST00000463908 COA7Q96BR5 231 aa22.04■■□□□ 1.12
LMNB1-204ENST00000463908 HOXD10P28358 340 aa22.03■■□□□ 1.12
LMNB1-204ENST00000463908 SMARCA1P28370 1054 aa22.03■■□□□ 1.12
LMNB1-204ENST00000463908 PDIA3P30101 505 aaKnown RBP22.03■■□□□ 1.12
LMNB1-204ENST00000463908 KIF5BP33176 963 aa22.03■■□□□ 1.12
LMNB1-204ENST00000463908 FLT3LGP49771 235 aa22.03■■□□□ 1.12
LMNB1-204ENST00000463908 NEK4P51957 841 aa22.03■■□□□ 1.12
LMNB1-204ENST00000463908 WDR78Q5VTH9 848 aa22.03■■□□□ 1.12
LMNB1-204ENST00000463908 CDC27P30260 824 aa22.02■■□□□ 1.12
LMNB1-204ENST00000463908 CDC37Q16543 378 aaPredicted RBP22.02■■□□□ 1.12
LMNB1-204ENST00000463908 QRICH1Q2TAL8 776 aa22.02■■□□□ 1.12
LMNB1-204ENST00000463908 MGAMO43451 1857 aa22.02■■□□□ 1.12
LMNB1-204ENST00000463908 SLC15A5A6NIM6 579 aa22.01■■□□□ 1.11
LMNB1-204ENST00000463908 STRNO43815 780 aa22.01■■□□□ 1.11
LMNB1-204ENST00000463908 DHX16O60231 1041 aaKnown RBP22.01■■□□□ 1.11
LMNB1-204ENST00000463908 ADD1P35611 737 aaKnown RBP22.01■■□□□ 1.11
LMNB1-204ENST00000463908 GNAQP50148 359 aa22.01■■□□□ 1.11
LMNB1-204ENST00000463908 RCAN1P53805 252 aa22.01■■□□□ 1.11
LMNB1-204ENST00000463908 AK2P54819 239 aa22.01■■□□□ 1.11
LMNB1-204ENST00000463908 PRMT2P55345 433 aa22.01■■□□□ 1.11
LMNB1-204ENST00000463908 FUT2Q10981 343 aa22.01■■□□□ 1.11
LMNB1-204ENST00000463908 PKN2Q16513 984 aaKnown RBP22.01■■□□□ 1.11
LMNB1-204ENST00000463908 TMTC3Q6ZXV5 915 aa22.01■■□□□ 1.11
LMNB1-204ENST00000463908 TBC1D32Q96NH3 1257 aa22.01■■□□□ 1.11
LMNB1-204ENST00000463908 TRERF1Q96PN7 1200 aa22.01■■□□□ 1.11
LMNB1-204ENST00000463908 PIGSQ96S52 555 aa22.01■■□□□ 1.11
LMNB1-204ENST00000463908 LZTS2Q9BRK4 669 aa22.01■■□□□ 1.11
LMNB1-204ENST00000463908 UPF2Q9HAU5 1272 aaKnown RBP22.01■■□□□ 1.11
LMNB1-204ENST00000463908 CCPG1Q9ULG6 757 aa22.01■■□□□ 1.11
LMNB1-204ENST00000463908 NAP1L2Q9ULW6 460 aaPredicted RBP22.01■■□□□ 1.11
LMNB1-204ENST00000463908 PTCH2Q9Y6C5 1203 aa22.01■■□□□ 1.11
LMNB1-204ENST00000463908 GOLGA8AA7E2F4 631 aa22■■□□□ 1.11
LMNB1-204ENST00000463908 GOLGA8BA8MQT2 603 aa22■■□□□ 1.11
LMNB1-204ENST00000463908 PPP1R11O60927 126 aaPredicted RBP22■■□□□ 1.11
LMNB1-204ENST00000463908 ALAS1P13196 640 aa22■■□□□ 1.11
LMNB1-204ENST00000463908 COPB2P35606 906 aa22■■□□□ 1.11
LMNB1-204ENST00000463908 GRB14Q14449 540 aa22■■□□□ 1.11
LMNB1-204ENST00000463908 RTN1Q16799 776 aa22■■□□□ 1.11
LMNB1-204ENST00000463908 MUM1L1Q5H9M0 696 aa22■■□□□ 1.11
LMNB1-204ENST00000463908 FBXO46Q6PJ61 603 aaPredicted RBP22■■□□□ 1.11
LMNB1-204ENST00000463908 CCDC82Q8N4S0 544 aa22■■□□□ 1.11
LMNB1-204ENST00000463908 CHST13Q8NET6 341 aa22■■□□□ 1.11
LMNB1-204ENST00000463908 ZNF274Q96GC6 653 aaPredicted RBP22■■□□□ 1.11
LMNB1-204ENST00000463908 NUDT12Q9BQG2 462 aa22■■□□□ 1.11
LMNB1-204ENST00000463908 SPZ1Q9BXG8 430 aa22■■□□□ 1.11
LMNB1-204ENST00000463908 ZBTB5O15062 677 aa21.99■■□□□ 1.11
LMNB1-204ENST00000463908 COBLO75128 1261 aa21.99■■□□□ 1.11
LMNB1-204ENST00000463908 CYP2B6P20813 491 aa21.99■■□□□ 1.11
LMNB1-204ENST00000463908 METAP2P50579 478 aaKnown RBP eCLIP21.99■■□□□ 1.11
LMNB1-204ENST00000463908 IRF5Q13568 498 aa21.99■■□□□ 1.11
LMNB1-204ENST00000463908 TKFCQ3LXA3 575 aa21.99■■□□□ 1.11
LMNB1-204ENST00000463908 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.99■■□□□ 1.11
LMNB1-204ENST00000463908 CLEC4DQ8WXI8 215 aa21.99■■□□□ 1.11
LMNB1-204ENST00000463908 CWC22Q9HCG8 908 aaKnown RBP21.99■■□□□ 1.11
LMNB1-204ENST00000463908 HOMER2Q9NSB8 354 aa21.99■■□□□ 1.11
LMNB1-204ENST00000463908 RNF146Q9NTX7 359 aa21.99■■□□□ 1.11
LMNB1-204ENST00000463908 RBM28Q9NW13 759 aaKnown RBP21.99■■□□□ 1.11
LMNB1-204ENST00000463908 TPCN1Q9ULQ1 816 aa21.99■■□□□ 1.11
LMNB1-204ENST00000463908 DOCK3Q8IZD9 2030 aa21.99■■□□□ 1.11
LMNB1-204ENST00000463908 PLXNB2O15031 1838 aa21.99■■□□□ 1.11
LMNB1-204ENST00000463908 FCER1AP12319 257 aa21.98■■□□□ 1.11
LMNB1-204ENST00000463908 ADORA2AP29274 412 aa21.98■■□□□ 1.11
LMNB1-204ENST00000463908 CCT2P78371 535 aaKnown RBP21.98■■□□□ 1.11
LMNB1-204ENST00000463908 MAP2K5Q13163 448 aa21.98■■□□□ 1.11
LMNB1-204ENST00000463908 HOMER1Q86YM7 354 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms