RNA–Protein interactions for RNA: ENST00000459963.5

NCSTN-209, Transcript of nicastrin, human

TSL 5

Gene NCSTN, Length 1,246 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCSTN-209	ENST00000459963	SPDYE16	A6NNV3	312 aa	Predicted RBP	10.07	□□□□□ -0.8
NCSTN-209	ENST00000459963	C6orf222	P0C671	652 aa	Predicted RBP	10.07	□□□□□ -0.8
NCSTN-209	ENST00000459963	JAG1	P78504	1218 aa		10.07	□□□□□ -0.8
NCSTN-209	ENST00000459963	TIGD5	Q53EQ6	642 aa		10.07	□□□□□ -0.8
NCSTN-209	ENST00000459963	SLC43A3	Q8NBI5	491 aa		10.07	□□□□□ -0.8
NCSTN-209	ENST00000459963	SHCBP1	Q8NEM2	672 aa		10.07	□□□□□ -0.8
NCSTN-209	ENST00000459963	MRPL38	Q96DV4	380 aa	Known RBP	10.07	□□□□□ -0.8
NCSTN-209	ENST00000459963	C12orf42	Q96LP6	360 aa		10.07	□□□□□ -0.8
NCSTN-209	ENST00000459963	CLDND1	Q9NY35	253 aa		10.07	□□□□□ -0.8
NCSTN-209	ENST00000459963	SETX	Q7Z333	2677 aa	Known RBP	10.07	□□□□□ -0.8
NCSTN-209	ENST00000459963	GPR179	Q6PRD1	2367 aa		10.07	□□□□□ -0.8
NCSTN-209	ENST00000459963	ELL2	O00472	640 aa	Predicted RBP	10.06	□□□□□ -0.8
NCSTN-209	ENST00000459963	DUSP11	O75319	330 aa	Known RBP	10.06	□□□□□ -0.8
NCSTN-209	ENST00000459963	LTBR	P36941	435 aa		10.06	□□□□□ -0.8
NCSTN-209	ENST00000459963	CLUL1	Q15846	466 aa		10.06	□□□□□ -0.8
NCSTN-209	ENST00000459963	PTPRO	Q16827	1216 aa		10.06	□□□□□ -0.8
NCSTN-209	ENST00000459963	RSPO4	Q2I0M5	234 aa	Predicted RBP	10.06	□□□□□ -0.8
NCSTN-209	ENST00000459963	TCEAL5	Q5H9L2	206 aa		10.06	□□□□□ -0.8
NCSTN-209	ENST00000459963	BANK1	Q8NDB2	785 aa		10.06	□□□□□ -0.8
NCSTN-209	ENST00000459963	CDCA7L	Q96GN5	454 aa		10.06	□□□□□ -0.8
NCSTN-209	ENST00000459963	HERC5	Q9UII4	1024 aa	Known RBP	10.06	□□□□□ -0.8
NCSTN-209	ENST00000459963	FAM184B	Q9ULE4	1060 aa		10.06	□□□□□ -0.8
NCSTN-209	ENST00000459963	CNPY2	Q9Y2B0	182 aa		10.06	□□□□□ -0.8
NCSTN-209	ENST00000459963	ASPM	Q8IZT6	3477 aa		10.06	□□□□□ -0.8
NCSTN-209	ENST00000459963	KIF16B	Q96L93	1317 aa		10.06	□□□□□ -0.8
NCSTN-209	ENST00000459963	FAM208B	Q5VWN6	2430 aa		10.05	□□□□□ -0.8
NCSTN-209	ENST00000459963	ANKRD11	Q6UB99	2663 aa	Predicted RBP	10.05	□□□□□ -0.8
NCSTN-209	ENST00000459963	SOBP	A7XYQ1	873 aa		10.05	□□□□□ -0.8
NCSTN-209	ENST00000459963	B4GALT4	O60513	344 aa		10.05	□□□□□ -0.8
NCSTN-209	ENST00000459963	PDGFB	P01127	241 aa	Predicted RBP	10.05	□□□□□ -0.8
NCSTN-209	ENST00000459963	SMAD4	Q13485	552 aa	Known RBP	10.05	□□□□□ -0.8
NCSTN-209	ENST00000459963	KIAA0319	Q5VV43	1072 aa		10.05	□□□□□ -0.8
NCSTN-209	ENST00000459963	CCDC30	Q5VVM6	783 aa		10.05	□□□□□ -0.8
NCSTN-209	ENST00000459963	TYW1B	Q6NUM6	668 aa		10.05	□□□□□ -0.8
NCSTN-209	ENST00000459963	RIPOR3	Q96MK2	946 aa		10.05	□□□□□ -0.8
NCSTN-209	ENST00000459963	ADAM33	Q9BZ11	813 aa		10.05	□□□□□ -0.8
NCSTN-209	ENST00000459963	SPATC1L	Q9H0A9	340 aa		10.05	□□□□□ -0.8
NCSTN-209	ENST00000459963	TRPV6	Q9H1D0	765 aa		10.05	□□□□□ -0.8
NCSTN-209	ENST00000459963	MROH8	Q9H579	483 aa		10.05	□□□□□ -0.8
NCSTN-209	ENST00000459963	MBIP	Q9NS73	344 aa		10.05	□□□□□ -0.8
NCSTN-209	ENST00000459963	GINM1	Q9NU53	330 aa		10.05	□□□□□ -0.8
NCSTN-209	ENST00000459963	ZNF292	O60281	2723 aa		10.05	□□□□□ -0.8
NCSTN-209	ENST00000459963	LINC01553	A4QN01	128 aa		10.04	□□□□□ -0.8
NCSTN-209	ENST00000459963	LOC730098	B7Z3J9	87 aa		10.04	□□□□□ -0.8
NCSTN-209	ENST00000459963	PDE8B	O95263	885 aa		10.04	□□□□□ -0.8
NCSTN-209	ENST00000459963	LMNA	P02545	664 aa	Known RBP	10.04	□□□□□ -0.8
NCSTN-209	ENST00000459963	BTD	P43251	543 aa		10.04	□□□□□ -0.8
NCSTN-209	ENST00000459963	ZYX	Q15942	572 aa	Known RBP	10.04	□□□□□ -0.8
NCSTN-209	ENST00000459963	SHROOM1	Q2M3G4	852 aa	Predicted RBP	10.04	□□□□□ -0.8
NCSTN-209	ENST00000459963	GNAS	Q5JWF2	1037 aa		10.04	□□□□□ -0.8
NCSTN-209	ENST00000459963	RPAIN	Q86UA6	219 aa		10.04	□□□□□ -0.8
NCSTN-209	ENST00000459963	TMEM105	Q8N8V8	129 aa		10.04	□□□□□ -0.8
NCSTN-209	ENST00000459963	KCNG4	Q8TDN1	519 aa		10.04	□□□□□ -0.8
NCSTN-209	ENST00000459963	ZBED2	Q9BTP6	218 aa		10.04	□□□□□ -0.8
NCSTN-209	ENST00000459963	SPC25	Q9HBM1	224 aa		10.04	□□□□□ -0.8
NCSTN-209	ENST00000459963	TNKS	O95271	1327 aa		10.04	□□□□□ -0.8
NCSTN-209	ENST00000459963	SI	P14410	1827 aa		10.03	□□□□□ -0.8
NCSTN-209	ENST00000459963	NCK2	O43639	380 aa		10.03	□□□□□ -0.8
NCSTN-209	ENST00000459963	BAIAP3	O94812	1187 aa		10.03	□□□□□ -0.8
NCSTN-209	ENST00000459963	ADRB1	P08588	477 aa		10.03	□□□□□ -0.8
NCSTN-209	ENST00000459963	FCER1A	P12319	257 aa		10.03	□□□□□ -0.8
NCSTN-209	ENST00000459963	VCAM1	P19320	739 aa		10.03	□□□□□ -0.8
NCSTN-209	ENST00000459963	GJA9	P57773	515 aa		10.03	□□□□□ -0.8
NCSTN-209	ENST00000459963	ITGA7	Q13683	1181 aa		10.03	□□□□□ -0.8
NCSTN-209	ENST00000459963	CBX2	Q14781	532 aa	Predicted RBP	10.03	□□□□□ -0.8
NCSTN-209	ENST00000459963	NEUROD2	Q15784	382 aa		10.03	□□□□□ -0.8
NCSTN-209	ENST00000459963	E2F4	Q16254	413 aa		10.03	□□□□□ -0.8
NCSTN-209	ENST00000459963	METTL24	Q5JXM2	366 aa		10.03	□□□□□ -0.8
NCSTN-209	ENST00000459963	NCAPG2	Q86XI2	1143 aa		10.03	□□□□□ -0.8
NCSTN-209	ENST00000459963	VGLL2	Q8N8G2	317 aa		10.03	□□□□□ -0.8
NCSTN-209	ENST00000459963	SEZ6L	Q9BYH1	1024 aa		10.03	□□□□□ -0.8
NCSTN-209	ENST00000459963	UPF3A	Q9H1J1	476 aa	Known RBP	10.03	□□□□□ -0.8
NCSTN-209	ENST00000459963	NSUN3	Q9H649	340 aa	Known RBP	10.03	□□□□□ -0.8
NCSTN-209	ENST00000459963	ZBTB21	Q9ULJ3	1066 aa		10.03	□□□□□ -0.8
NCSTN-209	ENST00000459963	DIS3	Q9Y2L1	958 aa	Known RBP	10.03	□□□□□ -0.8
NCSTN-209	ENST00000459963	SALL1	Q9NSC2	1324 aa		10.03	□□□□□ -0.8
NCSTN-209	ENST00000459963	MYH2	Q9UKX2	1941 aa		10.02	□□□□□ -0.81
NCSTN-209	ENST00000459963	HR	O43593	1189 aa		10.02	□□□□□ -0.81
NCSTN-209	ENST00000459963	GDF11	O95390	407 aa		10.02	□□□□□ -0.81
NCSTN-209	ENST00000459963	PGK2	P07205	417 aa		10.02	□□□□□ -0.81
NCSTN-209	ENST00000459963	IFIT1	P09914	478 aa	Known RBP	10.02	□□□□□ -0.81
NCSTN-209	ENST00000459963	RFC2	P35250	354 aa		10.02	□□□□□ -0.81
NCSTN-209	ENST00000459963	KCNJ6	P48051	423 aa		10.02	□□□□□ -0.81
NCSTN-209	ENST00000459963	RHBDL3	P58872	404 aa		10.02	□□□□□ -0.81
NCSTN-209	ENST00000459963	DLX2	Q07687	328 aa	Predicted RBP	10.02	□□□□□ -0.81
NCSTN-209	ENST00000459963	CTC1	Q2NKJ3	1217 aa		10.02	□□□□□ -0.81
NCSTN-209	ENST00000459963	TMCO2	Q7Z6W1	182 aa	Predicted RBP	10.02	□□□□□ -0.81
NCSTN-209	ENST00000459963	LINS1	Q8NG48	757 aa		10.02	□□□□□ -0.81
NCSTN-209	ENST00000459963	RAD9A	Q99638	391 aa		10.02	□□□□□ -0.81
NCSTN-209	ENST00000459963	FEZ1	Q99689	392 aa		10.02	□□□□□ -0.81
NCSTN-209	ENST00000459963	EPAS1	Q99814	870 aa		10.02	□□□□□ -0.81
NCSTN-209	ENST00000459963	CHMP4A	Q9BY43	222 aa		10.02	□□□□□ -0.81
NCSTN-209	ENST00000459963	DACH1	Q9UI36	760 aa		10.02	□□□□□ -0.81
NCSTN-209	ENST00000459963	VPS9D1	Q9Y2B5	631 aa		10.02	□□□□□ -0.81
NCSTN-209	ENST00000459963	PCDHGA10	Q9Y5H3	936 aa		10.02	□□□□□ -0.81
NCSTN-209	ENST00000459963	MYH13	Q9UKX3	1938 aa		10.01	□□□□□ -0.81
NCSTN-209	ENST00000459963	PPP1R3G	B7ZBB8	358 aa		10.01	□□□□□ -0.81
NCSTN-209	ENST00000459963	USP14	P54578	494 aa		10.01	□□□□□ -0.81
NCSTN-209	ENST00000459963	DMWD	Q09019	674 aa		10.01	□□□□□ -0.81
NCSTN-209	ENST00000459963	ZNF792	Q3KQV3	632 aa		10.01	□□□□□ -0.81

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