RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 CHURC1Q8WUH1 139 aa27.94■■■□□ 2.06
U2AF1-204ENST00000459639 AS3MTQ9HBK9 375 aa27.94■■■□□ 2.06
U2AF1-204ENST00000459639 PICK1Q9NRD5 415 aa27.94■■■□□ 2.06
U2AF1-204ENST00000459639 PRR12Q9ULL5 1215 aa27.94■■■□□ 2.06
U2AF1-204ENST00000459639 UTRNP46939 3433 aa27.94■■■□□ 2.06
U2AF1-204ENST00000459639 CCAR1Q8IX12 1150 aaKnown RBP27.94■■■□□ 2.06
U2AF1-204ENST00000459639 RASGRP4Q8TDF6 673 aa27.94■■■□□ 2.06
U2AF1-204ENST00000459639 ADM5C9JUS6 153 aa27.93■■■□□ 2.06
U2AF1-204ENST00000459639 ATP2B1P20020 1258 aa27.93■■■□□ 2.06
U2AF1-204ENST00000459639 MARCKSP29966 332 aaPredicted RBP27.93■■■□□ 2.06
U2AF1-204ENST00000459639 AXDND1Q5T1B0 1012 aaPredicted RBP27.93■■■□□ 2.06
U2AF1-204ENST00000459639 KRT26Q7Z3Y9 468 aa27.93■■■□□ 2.06
U2AF1-204ENST00000459639 REXO1Q8N1G1 1221 aaKnown RBP27.93■■■□□ 2.06
U2AF1-204ENST00000459639 MRPS27Q92552 414 aaKnown RBP27.93■■■□□ 2.06
U2AF1-204ENST00000459639 ZKSCAN4Q969J2 545 aaPredicted RBP27.93■■■□□ 2.06
U2AF1-204ENST00000459639 RIC8AQ9NPQ8 531 aa27.93■■■□□ 2.06
U2AF1-204ENST00000459639 DDX19AQ9NUU7 478 aaKnown RBP27.93■■■□□ 2.06
U2AF1-204ENST00000459639 FEM1BQ9UK73 627 aa27.93■■■□□ 2.06
U2AF1-204ENST00000459639 WDR46O15213 610 aaKnown RBP27.92■■■□□ 2.06
U2AF1-204ENST00000459639 PTPRAP18433 802 aa27.92■■■□□ 2.06
U2AF1-204ENST00000459639 CCDC73Q6ZRK6 1079 aa27.92■■■□□ 2.06
U2AF1-204ENST00000459639 DDX55Q8NHQ9 600 aaKnown RBP eCLIP27.92■■■□□ 2.06
U2AF1-204ENST00000459639 AMNQ9BXJ7 453 aa27.92■■■□□ 2.06
U2AF1-204ENST00000459639 GLT8D2Q9H1C3 349 aa27.92■■■□□ 2.06
U2AF1-204ENST00000459639 TAF1DQ9H5J8 278 aaPredicted RBP27.92■■■□□ 2.06
U2AF1-204ENST00000459639 CUTAO60888 179 aa27.91■■■□□ 2.06
U2AF1-204ENST00000459639 USP14P54578 494 aa27.91■■■□□ 2.06
U2AF1-204ENST00000459639 FSIP1Q8NA03 581 aa27.91■■■□□ 2.06
U2AF1-204ENST00000459639 FBXO11Q86XK2 927 aa27.91■■■□□ 2.06
U2AF1-204ENST00000459639 KRI1Q8N9T8 703 aaKnown RBP27.91■■■□□ 2.06
U2AF1-204ENST00000459639 CUL5Q93034 780 aa27.91■■■□□ 2.06
U2AF1-204ENST00000459639 DACT1Q9NYF0 836 aa27.91■■■□□ 2.06
U2AF1-204ENST00000459639 FZD1Q9UP38 647 aa27.91■■■□□ 2.06
U2AF1-204ENST00000459639 PCDHA1Q9Y5I3 950 aa27.91■■■□□ 2.06
U2AF1-204ENST00000459639 USP2O75604 605 aaPredicted RBP27.9■■■□□ 2.06
U2AF1-204ENST00000459639 LETM1O95202 739 aaPredicted RBP27.9■■■□□ 2.06
U2AF1-204ENST00000459639 TRAF1Q13077 416 aa27.9■■■□□ 2.06
U2AF1-204ENST00000459639 NONOQ15233 471 aaKnown RBP eCLIP27.9■■■□□ 2.06
U2AF1-204ENST00000459639 GOLPH3LQ9H4A5 285 aa27.9■■■□□ 2.06
U2AF1-204ENST00000459639 PARP14Q460N5 1801 aa27.89■■■□□ 2.06
U2AF1-204ENST00000459639 CMA1P23946 247 aa27.89■■■□□ 2.06
U2AF1-204ENST00000459639 MRPL12P52815 198 aaKnown RBP27.89■■■□□ 2.06
U2AF1-204ENST00000459639 FAM160A1Q05DH4 1040 aa27.89■■■□□ 2.06
U2AF1-204ENST00000459639 ZNF280CQ8ND82 737 aa27.89■■■□□ 2.06
U2AF1-204ENST00000459639 RANBP17Q9H2T7 1088 aaKnown RBP27.89■■■□□ 2.06
U2AF1-204ENST00000459639 FBXO2Q9UK22 296 aaPredicted RBP27.89■■■□□ 2.06
U2AF1-204ENST00000459639 WNT7AO00755 349 aa27.88■■■□□ 2.05
U2AF1-204ENST00000459639 NR1I2O75469 434 aa27.88■■■□□ 2.05
U2AF1-204ENST00000459639 PTPREP23469 700 aa27.88■■■□□ 2.05
U2AF1-204ENST00000459639 MTMR2Q13614 643 aa27.88■■■□□ 2.05
U2AF1-204ENST00000459639 PNMA8AQ86V59 439 aaPredicted RBP27.88■■■□□ 2.05
U2AF1-204ENST00000459639 SYCE3A1L190 88 aa27.87■■■□□ 2.05
U2AF1-204ENST00000459639 POTECB2RU33 542 aa27.87■■■□□ 2.05
U2AF1-204ENST00000459639 SOCS7O14512 581 aa27.87■■■□□ 2.05
U2AF1-204ENST00000459639 PPP1R12BO60237 982 aaPredicted RBP27.87■■■□□ 2.05
U2AF1-204ENST00000459639 ZNF174Q15697 407 aa27.87■■■□□ 2.05
U2AF1-204ENST00000459639 ENGASEQ8NFI3 743 aa27.87■■■□□ 2.05
U2AF1-204ENST00000459639 NUP62CLQ9H1M0 184 aa27.87■■■□□ 2.05
U2AF1-204ENST00000459639 CLK2P49760 499 aaKnown RBP27.87■■■□□ 2.05
U2AF1-204ENST00000459639 BACE1P56817 501 aa27.87■■■□□ 2.05
U2AF1-204ENST00000459639 SPP2Q13103 211 aa27.87■■■□□ 2.05
U2AF1-204ENST00000459639 INF2Q27J81 1249 aa27.87■■■□□ 2.05
U2AF1-204ENST00000459639 PSTPIP2Q9H939 334 aa27.87■■■□□ 2.05
U2AF1-204ENST00000459639 BIN2Q9UBW5 565 aaPredicted RBP27.87■■■□□ 2.05
U2AF1-204ENST00000459639 SRPRBQ9Y5M8 271 aaKnown RBP27.87■■■□□ 2.05
U2AF1-204ENST00000459639 NF2P35240 595 aa27.86■■■□□ 2.05
U2AF1-204ENST00000459639 SNAP25P60880 206 aa27.86■■■□□ 2.05
U2AF1-204ENST00000459639 MAP3K9P80192 1104 aa27.86■■■□□ 2.05
U2AF1-204ENST00000459639 ATP2C1P98194 919 aaPredicted RBP27.86■■■□□ 2.05
U2AF1-204ENST00000459639 ZNF579Q8NAF0 562 aaKnown RBP27.86■■■□□ 2.05
U2AF1-204ENST00000459639 KIFC2Q96AC6 838 aa27.86■■■□□ 2.05
U2AF1-204ENST00000459639 CDCA5Q96FF9 252 aa27.86■■■□□ 2.05
U2AF1-204ENST00000459639 CLSTN2Q9H4D0 955 aa27.86■■■□□ 2.05
U2AF1-204ENST00000459639 SNW1Q13573 536 aaKnown RBP27.85■■■□□ 2.05
U2AF1-204ENST00000459639 EAPPQ56P03 285 aaPredicted RBP27.85■■■□□ 2.05
U2AF1-204ENST00000459639 JAKMIP3Q5VZ66 844 aa27.85■■■□□ 2.05
U2AF1-204ENST00000459639 FERMT2Q96AC1 680 aa27.85■■■□□ 2.05
U2AF1-204ENST00000459639 C12orf42Q96LP6 360 aa27.85■■■□□ 2.05
U2AF1-204ENST00000459639 EMILIN3Q9NT22 766 aa27.85■■■□□ 2.05
U2AF1-204ENST00000459639 TMEM260Q9NX78 707 aa27.85■■■□□ 2.05
U2AF1-204ENST00000459639 ZHX2Q9Y6X8 837 aa27.85■■■□□ 2.05
U2AF1-204ENST00000459639 FAM237AA0A1B0GTK4 181 aa27.84■■■□□ 2.05
U2AF1-204ENST00000459639 C19orf81C9J6K1 198 aa27.84■■■□□ 2.05
U2AF1-204ENST00000459639 VCAM1P19320 739 aa27.84■■■□□ 2.05
U2AF1-204ENST00000459639 IREB2P48200 963 aaKnown RBP27.84■■■□□ 2.05
U2AF1-204ENST00000459639 PRKG1Q13976 671 aa27.84■■■□□ 2.05
U2AF1-204ENST00000459639 RESP18Q5W5W9 173 aa27.84■■■□□ 2.05
U2AF1-204ENST00000459639 SHC4Q6S5L8 630 aa27.84■■■□□ 2.05
U2AF1-204ENST00000459639 LRSAM1Q6UWE0 723 aa27.84■■■□□ 2.05
U2AF1-204ENST00000459639 DLK2Q6UY11 383 aa27.84■■■□□ 2.05
U2AF1-204ENST00000459639 PPP1R3FQ6ZSY5 799 aaPredicted RBP27.84■■■□□ 2.05
U2AF1-204ENST00000459639 TEX2Q8IWB9 1127 aa27.84■■■□□ 2.05
U2AF1-204ENST00000459639 SRCAPQ6ZRS2 3230 aa27.84■■■□□ 2.05
U2AF1-204ENST00000459639 PTPRFP10586 1907 aa27.84■■■□□ 2.05
U2AF1-204ENST00000459639 A0A1B0GVL5 298 aa27.84■■■□□ 2.05
U2AF1-204ENST00000459639 MCM7P33993 719 aa27.84■■■□□ 2.05
U2AF1-204ENST00000459639 PTGDRQ13258 359 aa27.84■■■□□ 2.05
U2AF1-204ENST00000459639 ORC2Q13416 577 aaPredicted RBP27.84■■■□□ 2.05
U2AF1-204ENST00000459639 NEK8Q86SG6 692 aa27.84■■■□□ 2.05
U2AF1-204ENST00000459639 FMR1NBQ8N0W7 255 aaPredicted RBP27.84■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms