RNA–Protein interactions for RNA: ENST00000458516.5

TRIM39-211, Transcript of tripartite motif containing 39, humanhuman

TSL 2

Gene TRIM39, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-211ENST00000458516 PAGR1Q9BTK6 254 aa19.53■□□□□ 0.72
TRIM39-211ENST00000458516 R3HDMLQ9H3Y0 253 aa19.53■□□□□ 0.72
TRIM39-211ENST00000458516 ZNF214Q9UL59 606 aaPredicted RBP19.53■□□□□ 0.72
TRIM39-211ENST00000458516 RABGAP1Q9Y3P9 1069 aa19.53■□□□□ 0.72
TRIM39-211ENST00000458516 DTNBO60941 627 aa19.52■□□□□ 0.72
TRIM39-211ENST00000458516 PPFIA3O75145 1194 aa19.52■□□□□ 0.72
TRIM39-211ENST00000458516 BCRP11274 1271 aa19.52■□□□□ 0.72
TRIM39-211ENST00000458516 MAP2K1Q02750 393 aaPredicted RBP19.52■□□□□ 0.72
TRIM39-211ENST00000458516 CCDC174Q6PII3 467 aa19.52■□□□□ 0.72
TRIM39-211ENST00000458516 CPLX2Q6PUV4 134 aaKnown RBP19.52■□□□□ 0.72
TRIM39-211ENST00000458516 HOMER1Q86YM7 354 aa19.52■□□□□ 0.72
TRIM39-211ENST00000458516 PIBF1Q8WXW3 757 aa19.52■□□□□ 0.72
TRIM39-211ENST00000458516 MORF4L1Q9UBU8 362 aa19.52■□□□□ 0.72
TRIM39-211ENST00000458516 CPA4Q9UI42 421 aa19.52■□□□□ 0.72
TRIM39-211ENST00000458516 ZSWIM8A7E2V4 1837 aa19.51■□□□□ 0.71
TRIM39-211ENST00000458516 hCG_1642624A0A1W2PR95 340 aa19.51■□□□□ 0.71
TRIM39-211ENST00000458516 ZBTB5O15062 677 aa19.51■□□□□ 0.71
TRIM39-211ENST00000458516 PPP1R11O60927 126 aaPredicted RBP19.51■□□□□ 0.71
TRIM39-211ENST00000458516 TRPA1O75762 1119 aa19.51■□□□□ 0.71
TRIM39-211ENST00000458516 CDKL5O76039 1030 aa19.51■□□□□ 0.71
TRIM39-211ENST00000458516 FMNL1O95466 1100 aaPredicted RBP19.51■□□□□ 0.71
TRIM39-211ENST00000458516 CUL4AQ13619 759 aa19.51■□□□□ 0.71
TRIM39-211ENST00000458516 FAM110CQ1W6H9 321 aa19.51■□□□□ 0.71
TRIM39-211ENST00000458516 C17orf99Q6UX52 265 aa19.51■□□□□ 0.71
TRIM39-211ENST00000458516 ANKRD13CQ8N6S4 541 aa19.51■□□□□ 0.71
TRIM39-211ENST00000458516 RRP36Q96EU6 259 aaKnown RBP19.51■□□□□ 0.71
TRIM39-211ENST00000458516 SLC26A6Q9BXS9 759 aa19.51■□□□□ 0.71
TRIM39-211ENST00000458516 RNF26Q9BY78 433 aaPredicted RBP19.51■□□□□ 0.71
TRIM39-211ENST00000458516 RAVER2Q9HCJ3 691 aaKnown RBP19.51■□□□□ 0.71
TRIM39-211ENST00000458516 SAGE1Q9NXZ1 904 aa19.51■□□□□ 0.71
TRIM39-211ENST00000458516 V9GY48 417 aaPredicted RBP19.51■□□□□ 0.71
TRIM39-211ENST00000458516 PLXNB2O15031 1838 aa19.51■□□□□ 0.71
TRIM39-211ENST00000458516 STK36Q9NRP7 1315 aa19.51■□□□□ 0.71
TRIM39-211ENST00000458516 PNMA6FA0A0J9YX94 578 aa19.5■□□□□ 0.71
TRIM39-211ENST00000458516 PTPDC1A2A3K4 754 aa19.5■□□□□ 0.71
TRIM39-211ENST00000458516 ATP2A1O14983 1001 aa19.5■□□□□ 0.71
TRIM39-211ENST00000458516 PRPF3O43395 683 aaKnown RBP19.5■□□□□ 0.71
TRIM39-211ENST00000458516 JAK2O60674 1132 aa19.5■□□□□ 0.71
TRIM39-211ENST00000458516 TBC1D8O95759 1140 aa19.5■□□□□ 0.71
TRIM39-211ENST00000458516 ICAM1P05362 532 aa19.5■□□□□ 0.71
TRIM39-211ENST00000458516 TAL1P17542 331 aaPredicted RBP19.5■□□□□ 0.71
TRIM39-211ENST00000458516 OAZ1P54368 228 aa19.5■□□□□ 0.71
TRIM39-211ENST00000458516 ERVK-9P63128 1117 aa19.5■□□□□ 0.71
TRIM39-211ENST00000458516 ERVK-24P63145 666 aa19.5■□□□□ 0.71
TRIM39-211ENST00000458516 Q3C1V9 767 aa19.5■□□□□ 0.71
TRIM39-211ENST00000458516 CPXCR1Q8N123 301 aa19.5■□□□□ 0.71
TRIM39-211ENST00000458516 JMYQ8N9B5 988 aa19.5■□□□□ 0.71
TRIM39-211ENST00000458516 LLPHQ9BRT6 129 aaKnown RBP19.5■□□□□ 0.71
TRIM39-211ENST00000458516 WBP1LQ9NX94 342 aa19.5■□□□□ 0.71
TRIM39-211ENST00000458516 CTDP1Q9Y5B0 961 aaPredicted RBP19.5■□□□□ 0.71
TRIM39-211ENST00000458516 DOCK3Q8IZD9 2030 aa19.49■□□□□ 0.71
TRIM39-211ENST00000458516 ZNFX1Q9P2E3 1918 aaKnown RBP19.49■□□□□ 0.71
TRIM39-211ENST00000458516 SSRP1Q08945 709 aaKnown RBP19.49■□□□□ 0.71
TRIM39-211ENST00000458516 PKN1Q16512 942 aa19.49■□□□□ 0.71
TRIM39-211ENST00000458516 SMARCC2Q8TAQ2 1214 aa19.49■□□□□ 0.71
TRIM39-211ENST00000458516 AGBL1Q96MI9 1066 aa19.49■□□□□ 0.71
TRIM39-211ENST00000458516 SPATC1LQ9H0A9 340 aa19.49■□□□□ 0.71
TRIM39-211ENST00000458516 SEC63Q9UGP8 760 aaKnown RBP19.49■□□□□ 0.71
TRIM39-211ENST00000458516 STAT3P40763 770 aa19.48■□□□□ 0.71
TRIM39-211ENST00000458516 PLS1Q14651 629 aa19.48■□□□□ 0.71
TRIM39-211ENST00000458516 PFKFB3Q16875 520 aaPredicted RBP19.48■□□□□ 0.71
TRIM39-211ENST00000458516 SNRNP48Q6IEG0 339 aaKnown RBP19.48■□□□□ 0.71
TRIM39-211ENST00000458516 FBXO11Q86XK2 927 aa19.48■□□□□ 0.71
TRIM39-211ENST00000458516 TRIM22Q8IYM9 498 aa19.48■□□□□ 0.71
TRIM39-211ENST00000458516 GPRC5AQ8NFJ5 357 aa19.48■□□□□ 0.71
TRIM39-211ENST00000458516 TEX13BQ9BXU2 312 aa19.48■□□□□ 0.71
TRIM39-211ENST00000458516 RBM27Q9P2N5 1060 aaKnown RBP19.48■□□□□ 0.71
TRIM39-211ENST00000458516 CCPG1Q9ULG6 757 aa19.48■□□□□ 0.71
TRIM39-211ENST00000458516 FDPSP14324 419 aaKnown RBP19.47■□□□□ 0.71
TRIM39-211ENST00000458516 RIOX2Q8IUF8 465 aa19.47■□□□□ 0.71
TRIM39-211ENST00000458516 AMNQ9BXJ7 453 aa19.47■□□□□ 0.71
TRIM39-211ENST00000458516 MOV10L1Q9BXT6 1211 aaKnown RBP19.47■□□□□ 0.71
TRIM39-211ENST00000458516 ORC3Q9UBD5 711 aaPredicted RBP19.47■□□□□ 0.71
TRIM39-211ENST00000458516 RIPK3Q9Y572 518 aa19.47■□□□□ 0.71
TRIM39-211ENST00000458516 LCTP09848 1927 aa19.47■□□□□ 0.71
TRIM39-211ENST00000458516 DEXIO95424 95 aa19.46■□□□□ 0.71
TRIM39-211ENST00000458516 SCG2P13521 617 aa19.46■□□□□ 0.71
TRIM39-211ENST00000458516 AKAP17AQ02040 695 aaKnown RBP19.46■□□□□ 0.71
TRIM39-211ENST00000458516 USH1GQ495M9 461 aa19.46■□□□□ 0.71
TRIM39-211ENST00000458516 WWC2Q6AWC2 1192 aa19.46■□□□□ 0.71
TRIM39-211ENST00000458516 GPKOWQ92917 476 aaPredicted RBP eCLIP19.46■□□□□ 0.71
TRIM39-211ENST00000458516 COA7Q96BR5 231 aa19.46■□□□□ 0.71
TRIM39-211ENST00000458516 DDX11Q96FC9 970 aa19.46■□□□□ 0.71
TRIM39-211ENST00000458516 PORCNQ9H237 461 aa19.46■□□□□ 0.71
TRIM39-211ENST00000458516 PNMA2Q9UL42 364 aa19.46■□□□□ 0.71
TRIM39-211ENST00000458516 ALAS1P13196 640 aa19.45■□□□□ 0.7
TRIM39-211ENST00000458516 TKFCQ3LXA3 575 aa19.45■□□□□ 0.7
TRIM39-211ENST00000458516 SHCBP1Q8NEM2 672 aa19.45■□□□□ 0.7
TRIM39-211ENST00000458516 AIFM3Q96NN9 605 aa19.45■□□□□ 0.7
TRIM39-211ENST00000458516 BEGAINQ9BUH8 593 aa19.45■□□□□ 0.7
TRIM39-211ENST00000458516 RBM19Q9Y4C8 960 aaKnown RBP19.45■□□□□ 0.7
TRIM39-211ENST00000458516 PCDHA1Q9Y5I3 950 aa19.45■□□□□ 0.7
TRIM39-211ENST00000458516 ZNF236Q9UL36 1845 aa19.45■□□□□ 0.7
TRIM39-211ENST00000458516 CEP350Q5VT06 3117 aa19.45■□□□□ 0.7
TRIM39-211ENST00000458516 ABCB11O95342 1321 aa19.45■□□□□ 0.7
TRIM39-211ENST00000458516 hCG_1984214I3L0E3 225 aa19.44■□□□□ 0.7
TRIM39-211ENST00000458516 STXBP3O00186 592 aa19.44■□□□□ 0.7
TRIM39-211ENST00000458516 SLC25A27O95847 323 aa19.44■□□□□ 0.7
TRIM39-211ENST00000458516 ERCC3P19447 782 aa19.44■□□□□ 0.7
TRIM39-211ENST00000458516 COPB2P35606 906 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms