RNA–Protein interactions for RNA: ENST00000454852.6

TRAF4-206, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-206ENST00000454852 ESYT2A0FGR8 921 aa13□□□□□ -0.33
TRAF4-206ENST00000454852 PDHXO00330 501 aa13□□□□□ -0.33
TRAF4-206ENST00000454852 ZBED4O75132 1171 aa13□□□□□ -0.33
TRAF4-206ENST00000454852 ICAM1P05362 532 aa13□□□□□ -0.33
TRAF4-206ENST00000454852 MAP2K2P36507 400 aa13□□□□□ -0.33
TRAF4-206ENST00000454852 C1QTNF8P60827 252 aa13□□□□□ -0.33
TRAF4-206ENST00000454852 HERVK_113P62684 666 aa13□□□□□ -0.33
TRAF4-206ENST00000454852 IRX3P78415 501 aaPredicted RBP13□□□□□ -0.33
TRAF4-206ENST00000454852 IKQ13123 557 aaPredicted RBP13□□□□□ -0.33
TRAF4-206ENST00000454852 CYP4F22Q6NT55 531 aa13□□□□□ -0.33
TRAF4-206ENST00000454852 POTEEQ6S8J3 1075 aa13□□□□□ -0.33
TRAF4-206ENST00000454852 IFNL1Q8IU54 200 aa13□□□□□ -0.33
TRAF4-206ENST00000454852 KIFC2Q96AC6 838 aa13□□□□□ -0.33
TRAF4-206ENST00000454852 ATG4CQ96DT6 458 aa13□□□□□ -0.33
TRAF4-206ENST00000454852 P2RX7Q99572 595 aaKnown RBP13□□□□□ -0.33
TRAF4-206ENST00000454852 AMNQ9BXJ7 453 aa13□□□□□ -0.33
TRAF4-206ENST00000454852 BARHL2Q9NY43 387 aa13□□□□□ -0.33
TRAF4-206ENST00000454852 ZBTB4Q9P1Z0 1013 aaPredicted RBP13□□□□□ -0.33
TRAF4-206ENST00000454852 DAXXQ9UER7 740 aaPredicted RBP13□□□□□ -0.33
TRAF4-206ENST00000454852 WDR33Q9C0J8 1336 aaKnown RBP12.99□□□□□ -0.33
TRAF4-206ENST00000454852 BAZ2BQ9UIF8 2168 aaKnown RBP12.99□□□□□ -0.33
TRAF4-206ENST00000454852 IGF2BP3O00425 579 aaKnown RBP eCLIP12.99□□□□□ -0.33
TRAF4-206ENST00000454852 PPP1R11O60927 126 aaPredicted RBP12.99□□□□□ -0.33
TRAF4-206ENST00000454852 HSPA6P17066 643 aa12.99□□□□□ -0.33
TRAF4-206ENST00000454852 GCLCP48506 637 aaPredicted RBP12.99□□□□□ -0.33
TRAF4-206ENST00000454852 KIF23Q02241 960 aaPredicted RBP12.99□□□□□ -0.33
TRAF4-206ENST00000454852 GHRHRQ02643 423 aa12.99□□□□□ -0.33
TRAF4-206ENST00000454852 MKRN3Q13064 507 aaKnown RBP12.99□□□□□ -0.33
TRAF4-206ENST00000454852 WWC2Q6AWC2 1192 aa12.99□□□□□ -0.33
TRAF4-206ENST00000454852 OTUD7BQ6GQQ9 843 aa12.99□□□□□ -0.33
TRAF4-206ENST00000454852 GALNT17Q6IS24 598 aa12.99□□□□□ -0.33
TRAF4-206ENST00000454852 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.99□□□□□ -0.33
TRAF4-206ENST00000454852 FAM184AQ8NB25 1140 aa12.99□□□□□ -0.33
TRAF4-206ENST00000454852 FBXO18Q8NFZ0 1043 aa12.99□□□□□ -0.33
TRAF4-206ENST00000454852 CCDC12Q8WUD4 166 aaPredicted RBP12.99□□□□□ -0.33
TRAF4-206ENST00000454852 DDX11Q96FC9 970 aa12.99□□□□□ -0.33
TRAF4-206ENST00000454852 PARK7Q99497 189 aaKnown RBP12.99□□□□□ -0.33
TRAF4-206ENST00000454852 ALG1Q9BT22 464 aa12.99□□□□□ -0.33
TRAF4-206ENST00000454852 CFHR5Q9BXR6 569 aa12.99□□□□□ -0.33
TRAF4-206ENST00000454852 VAT1LQ9HCJ6 419 aa12.99□□□□□ -0.33
TRAF4-206ENST00000454852 MORF4L1Q9UBU8 362 aa12.99□□□□□ -0.33
TRAF4-206ENST00000454852 ZNF214Q9UL59 606 aaPredicted RBP12.99□□□□□ -0.33
TRAF4-206ENST00000454852 ISY1Q9ULR0 285 aaKnown RBP12.99□□□□□ -0.33
TRAF4-206ENST00000454852 RABGAP1Q9Y3P9 1069 aa12.99□□□□□ -0.33
TRAF4-206ENST00000454852 ABCB11O95342 1321 aa12.98□□□□□ -0.33
TRAF4-206ENST00000454852 COL11A1P12107 1806 aaPredicted RBP12.98□□□□□ -0.33
TRAF4-206ENST00000454852 STXBP3O00186 592 aa12.98□□□□□ -0.33
TRAF4-206ENST00000454852 ALDH1A1P00352 501 aa12.98□□□□□ -0.33
TRAF4-206ENST00000454852 XBP1P17861 261 aa12.98□□□□□ -0.33
TRAF4-206ENST00000454852 SLC4A3P48751 1232 aa12.98□□□□□ -0.33
TRAF4-206ENST00000454852 TKFCQ3LXA3 575 aa12.98□□□□□ -0.33
TRAF4-206ENST00000454852 FBXO11Q86XK2 927 aa12.98□□□□□ -0.33
TRAF4-206ENST00000454852 HOMER1Q86YM7 354 aa12.98□□□□□ -0.33
TRAF4-206ENST00000454852 SAMD3Q8N6K7 520 aa12.98□□□□□ -0.33
TRAF4-206ENST00000454852 CCDC148Q8NFR7 591 aa12.98□□□□□ -0.33
TRAF4-206ENST00000454852 SHISA4Q96DD7 197 aa12.98□□□□□ -0.33
TRAF4-206ENST00000454852 TEX13BQ9BXU2 312 aa12.98□□□□□ -0.33
TRAF4-206ENST00000454852 ZMYND12Q9H0C1 365 aa12.98□□□□□ -0.33
TRAF4-206ENST00000454852 CIZ1Q9ULV3 898 aaPredicted RBP12.98□□□□□ -0.33
TRAF4-206ENST00000454852 hCG_1642624A0A1W2PR95 340 aa12.97□□□□□ -0.33
TRAF4-206ENST00000454852 CNMDO75829 334 aa12.97□□□□□ -0.33
TRAF4-206ENST00000454852 SYT1P21579 422 aa12.97□□□□□ -0.33
TRAF4-206ENST00000454852 COPB2P35606 906 aa12.97□□□□□ -0.33
TRAF4-206ENST00000454852 TMEM132BQ14DG7 1078 aa12.97□□□□□ -0.33
TRAF4-206ENST00000454852 LARP1BQ659C4 914 aaKnown RBP12.97□□□□□ -0.33
TRAF4-206ENST00000454852 TYW1BQ6NUM6 668 aa12.97□□□□□ -0.33
TRAF4-206ENST00000454852 RIOX2Q8IUF8 465 aa12.97□□□□□ -0.33
TRAF4-206ENST00000454852 DAGLBQ8NCG7 672 aa12.97□□□□□ -0.33
TRAF4-206ENST00000454852 C8orf76Q96K31 380 aa12.97□□□□□ -0.33
TRAF4-206ENST00000454852 AIFM3Q96NN9 605 aa12.97□□□□□ -0.33
TRAF4-206ENST00000454852 ZIC5Q96T25 663 aa12.97□□□□□ -0.33
TRAF4-206ENST00000454852 PHF20Q9BVI0 1012 aa12.97□□□□□ -0.33
TRAF4-206ENST00000454852 GLT8D2Q9H1C3 349 aa12.97□□□□□ -0.33
TRAF4-206ENST00000454852 RBPJLQ9UBG7 517 aa12.97□□□□□ -0.33
TRAF4-206ENST00000454852 PCDHA1Q9Y5I3 950 aa12.97□□□□□ -0.33
TRAF4-206ENST00000454852 PPFIA3O75145 1194 aa12.96□□□□□ -0.33
TRAF4-206ENST00000454852 CYP2C8P10632 490 aa12.96□□□□□ -0.33
TRAF4-206ENST00000454852 CALML3P27482 149 aa12.96□□□□□ -0.33
TRAF4-206ENST00000454852 STAT3P40763 770 aa12.96□□□□□ -0.33
TRAF4-206ENST00000454852 VEGFBP49765 207 aa12.96□□□□□ -0.33
TRAF4-206ENST00000454852 NPY5RQ15761 445 aa12.96□□□□□ -0.33
TRAF4-206ENST00000454852 KRT40Q6A162 431 aa12.96□□□□□ -0.33
TRAF4-206ENST00000454852 PAXIP1Q6ZW49 1069 aaPredicted RBP12.96□□□□□ -0.33
TRAF4-206ENST00000454852 HEATR3Q7Z4Q2 680 aa12.96□□□□□ -0.33
TRAF4-206ENST00000454852 SHCBP1Q8NEM2 672 aa12.96□□□□□ -0.33
TRAF4-206ENST00000454852 FOXD4L1Q9NU39 408 aa12.96□□□□□ -0.33
TRAF4-206ENST00000454852 MAP3K20Q9NYL2 800 aaKnown RBP12.96□□□□□ -0.33
TRAF4-206ENST00000454852 BTBD7Q9P203 1132 aa12.96□□□□□ -0.33
TRAF4-206ENST00000454852 MRPL11Q9Y3B7 192 aaKnown RBP12.96□□□□□ -0.33
TRAF4-206ENST00000454852 PIK3CDO00329 1044 aa12.95□□□□□ -0.34
TRAF4-206ENST00000454852 CA12O43570 354 aa12.95□□□□□ -0.34
TRAF4-206ENST00000454852 STX6O43752 255 aa12.95□□□□□ -0.34
TRAF4-206ENST00000454852 TLR2O60603 784 aa12.95□□□□□ -0.34
TRAF4-206ENST00000454852 AOC2O75106 756 aa12.95□□□□□ -0.34
TRAF4-206ENST00000454852 SLC25A27O95847 323 aa12.95□□□□□ -0.34
TRAF4-206ENST00000454852 MMP1P03956 469 aa12.95□□□□□ -0.34
TRAF4-206ENST00000454852 BCRP11274 1271 aa12.95□□□□□ -0.34
TRAF4-206ENST00000454852 GNA11P29992 359 aa12.95□□□□□ -0.34
TRAF4-206ENST00000454852 TRIM29Q14134 588 aa12.95□□□□□ -0.34
TRAF4-206ENST00000454852 FAM110CQ1W6H9 321 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms