RNA–Protein interactions for RNA: ENST00000454612.6

DDR1-240, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene DDR1, Length 3,942 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-240ENST00000454612 SRPRBQ9Y5M8 271 aaKnown RBP12.51□□□□□ -0.41
DDR1-240ENST00000454612 LOC102724159A0A0B4J2E5 919 aa12.5□□□□□ -0.41
DDR1-240ENST00000454612 RPN1P04843 607 aaKnown RBP12.5□□□□□ -0.41
DDR1-240ENST00000454612 OAS2P29728 719 aaKnown RBP12.5□□□□□ -0.41
DDR1-240ENST00000454612 PWP2Q15269 919 aaKnown RBP12.5□□□□□ -0.41
DDR1-240ENST00000454612 TERF2Q15554 542 aa12.5□□□□□ -0.41
DDR1-240ENST00000454612 DPP8Q6V1X1 898 aaPredicted RBP12.5□□□□□ -0.41
DDR1-240ENST00000454612 RBM28Q9NW13 759 aaKnown RBP12.5□□□□□ -0.41
DDR1-240ENST00000454612 HDAC6Q9UBN7 1215 aa12.5□□□□□ -0.41
DDR1-240ENST00000454612 LRWD1Q9UFC0 647 aa12.5□□□□□ -0.41
DDR1-240ENST00000454612 FBXO2Q9UK22 296 aaPredicted RBP12.5□□□□□ -0.41
DDR1-240ENST00000454612 FBXO3Q9UK99 471 aa12.5□□□□□ -0.41
DDR1-240ENST00000454612 CTDP1Q9Y5B0 961 aaPredicted RBP12.5□□□□□ -0.41
DDR1-240ENST00000454612 NRAPQ86VF7 1730 aa12.5□□□□□ -0.41
DDR1-240ENST00000454612 BUB1O43683 1085 aa12.5□□□□□ -0.41
DDR1-240ENST00000454612 SPATA1Q5VX52 437 aa12.5□□□□□ -0.41
DDR1-240ENST00000454612 IFT81Q8WYA0 676 aa12.5□□□□□ -0.41
DDR1-240ENST00000454612 CTAGE1Q96RT6 745 aa12.5□□□□□ -0.41
DDR1-240ENST00000454612 AGXT2Q9BYV1 514 aa12.5□□□□□ -0.41
DDR1-240ENST00000454612 ARFGEF2Q9Y6D5 1785 aa12.5□□□□□ -0.41
DDR1-240ENST00000454612 SP4Q02446 784 aa12.5□□□□□ -0.41
DDR1-240ENST00000454612 PTPAQ15257 358 aa12.5□□□□□ -0.41
DDR1-240ENST00000454612 TTC19Q6DKK2 380 aaPredicted RBP12.5□□□□□ -0.41
DDR1-240ENST00000454612 C2CD5Q86YS7 1000 aa12.5□□□□□ -0.41
DDR1-240ENST00000454612 RDH13Q8NBN7 331 aa12.5□□□□□ -0.41
DDR1-240ENST00000454612 SNX29Q8TEQ0 813 aa12.5□□□□□ -0.41
DDR1-240ENST00000454612 RNF26Q9BY78 433 aaPredicted RBP12.5□□□□□ -0.41
DDR1-240ENST00000454612 CYP4A11Q02928 519 aa12.49□□□□□ -0.41
DDR1-240ENST00000454612 UBE4AQ14139 1066 aa12.49□□□□□ -0.41
DDR1-240ENST00000454612 HLTFQ14527 1009 aaKnown RBP eCLIP12.49□□□□□ -0.41
DDR1-240ENST00000454612 SYCP1Q15431 976 aa12.49□□□□□ -0.41
DDR1-240ENST00000454612 E2F4Q16254 413 aa12.49□□□□□ -0.41
DDR1-240ENST00000454612 NTRK3Q16288 839 aa12.49□□□□□ -0.41
DDR1-240ENST00000454612 ZNF34Q8IZ26 560 aa12.49□□□□□ -0.41
DDR1-240ENST00000454612 SUGCTQ9HAC7 445 aa12.49□□□□□ -0.41
DDR1-240ENST00000454612 ZNF287Q9HBT7 754 aa12.49□□□□□ -0.41
DDR1-240ENST00000454612 CAPN2P17655 700 aa12.49□□□□□ -0.41
DDR1-240ENST00000454612 HNRNPH2P55795 449 aaKnown RBP12.49□□□□□ -0.41
DDR1-240ENST00000454612 KRT31Q15323 416 aa12.49□□□□□ -0.41
DDR1-240ENST00000454612 DCAF17Q5H9S7 520 aaPredicted RBP12.49□□□□□ -0.41
DDR1-240ENST00000454612 STAG1Q8WVM7 1258 aa12.49□□□□□ -0.41
DDR1-240ENST00000454612 CHP1Q99653 195 aa12.49□□□□□ -0.41
DDR1-240ENST00000454612 SALL1Q9NSC2 1324 aa12.49□□□□□ -0.41
DDR1-240ENST00000454612 CD44P16070 742 aaKnown RBP12.49□□□□□ -0.41
DDR1-240ENST00000454612 SF3B2Q13435 895 aaKnown RBP12.49□□□□□ -0.41
DDR1-240ENST00000454612 NCAPHQ15003 741 aa12.49□□□□□ -0.41
DDR1-240ENST00000454612 RRAGAQ7L523 313 aa12.49□□□□□ -0.41
DDR1-240ENST00000454612 CNGA4Q8IV77 575 aa12.49□□□□□ -0.41
DDR1-240ENST00000454612 GSPT2Q8IYD1 628 aaKnown RBP12.49□□□□□ -0.41
DDR1-240ENST00000454612 MICALL1Q8N3F8 863 aa12.49□□□□□ -0.41
DDR1-240ENST00000454612 PLCD4Q9BRC7 762 aa12.49□□□□□ -0.41
DDR1-240ENST00000454612 MRPL44Q9H9J2 332 aaKnown RBP12.49□□□□□ -0.41
DDR1-240ENST00000454612 TTF2Q9UNY4 1162 aaKnown RBP12.49□□□□□ -0.41
DDR1-240ENST00000454612 ATRNO75882 1429 aa12.49□□□□□ -0.41
DDR1-240ENST00000454612 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.48□□□□□ -0.41
DDR1-240ENST00000454612 ERVV-1B6SEH8 477 aa12.48□□□□□ -0.41
DDR1-240ENST00000454612 IKBKBO14920 756 aa12.48□□□□□ -0.41
DDR1-240ENST00000454612 CAMTA2O94983 1202 aa12.48□□□□□ -0.41
DDR1-240ENST00000454612 APBA3O96018 575 aa12.48□□□□□ -0.41
DDR1-240ENST00000454612 CDC25BP30305 580 aa12.48□□□□□ -0.41
DDR1-240ENST00000454612 COPB1P53618 953 aaKnown RBP12.48□□□□□ -0.41
DDR1-240ENST00000454612 KRT79Q5XKE5 535 aa12.48□□□□□ -0.41
DDR1-240ENST00000454612 SMCR8Q8TEV9 937 aaPredicted RBP12.48□□□□□ -0.41
DDR1-240ENST00000454612 NYXQ9GZU5 481 aa12.48□□□□□ -0.41
DDR1-240ENST00000454612 TACC3Q9Y6A5 838 aa12.48□□□□□ -0.41
DDR1-240ENST00000454612 DDX39AO00148 427 aaKnown RBP12.48□□□□□ -0.41
DDR1-240ENST00000454612 MEIS1O00470 390 aa12.48□□□□□ -0.41
DDR1-240ENST00000454612 BMP6P22004 513 aa12.48□□□□□ -0.41
DDR1-240ENST00000454612 PRCPP42785 496 aa12.48□□□□□ -0.41
DDR1-240ENST00000454612 FXR1P51114 621 aaKnown RBP eCLIP12.48□□□□□ -0.41
DDR1-240ENST00000454612 MYCBPQ99417 103 aaPredicted RBP12.48□□□□□ -0.41
DDR1-240ENST00000454612 PARD6BQ9BYG5 372 aa12.48□□□□□ -0.41
DDR1-240ENST00000454612 ANKRD2Q9GZV1 360 aa12.48□□□□□ -0.41
DDR1-240ENST00000454612 RMND1Q9NWS8 449 aa12.48□□□□□ -0.41
DDR1-240ENST00000454612 GGA1Q9UJY5 639 aa12.48□□□□□ -0.41
DDR1-240ENST00000454612 A0A087X0B3 334 aa12.48□□□□□ -0.41
DDR1-240ENST00000454612 POTEMA6NI47 508 aa12.48□□□□□ -0.41
DDR1-240ENST00000454612 KIF5AQ12840 1032 aa12.48□□□□□ -0.41
DDR1-240ENST00000454612 RAPGEF1Q13905 1077 aa12.48□□□□□ -0.41
DDR1-240ENST00000454612 INTS5Q6P9B9 1019 aaKnown RBP12.48□□□□□ -0.41
DDR1-240ENST00000454612 SGMS1Q86VZ5 419 aa12.48□□□□□ -0.41
DDR1-240ENST00000454612 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.48□□□□□ -0.41
DDR1-240ENST00000454612 ACBD3Q9H3P7 528 aa12.48□□□□□ -0.41
DDR1-240ENST00000454612 DBNDD1Q9H9R9 158 aa12.48□□□□□ -0.41
DDR1-240ENST00000454612 VEZTQ9HBM0 779 aa12.48□□□□□ -0.41
DDR1-240ENST00000454612 SAMM50Q9Y512 469 aa12.48□□□□□ -0.41
DDR1-240ENST00000454612 NONOQ15233 471 aaKnown RBP eCLIP12.47□□□□□ -0.41
DDR1-240ENST00000454612 HERC4Q5GLZ8 1057 aaPredicted RBP12.47□□□□□ -0.41
DDR1-240ENST00000454612 TMTC3Q6ZXV5 915 aa12.47□□□□□ -0.41
DDR1-240ENST00000454612 TBCKQ8TEA7 893 aa12.47□□□□□ -0.41
DDR1-240ENST00000454612 FERMT2Q96AC1 680 aa12.47□□□□□ -0.41
DDR1-240ENST00000454612 BCS1LQ9Y276 419 aa12.47□□□□□ -0.41
DDR1-240ENST00000454612 SORBS3O60504 671 aa12.47□□□□□ -0.41
DDR1-240ENST00000454612 FCER1AP12319 257 aa12.47□□□□□ -0.41
DDR1-240ENST00000454612 SMC1AQ14683 1233 aaKnown RBP12.47□□□□□ -0.41
DDR1-240ENST00000454612 LINC00116Q8NCU8 138 aa12.47□□□□□ -0.41
DDR1-240ENST00000454612 ARHGEF1Q92888 912 aaKnown RBP12.47□□□□□ -0.41
DDR1-240ENST00000454612 SPAG5Q96R06 1193 aa12.47□□□□□ -0.41
DDR1-240ENST00000454612 TMEM60Q9H2L4 133 aa12.47□□□□□ -0.41
DDR1-240ENST00000454612 PDE11AQ9HCR9 933 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms