RNA–Protein interactions for RNA: ENST00000447540.5

CHD9-203, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 11,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-203ENST00000447540 ADSLP30566 484 aaPredicted RBP3.2□□□□□ -1.9
CHD9-203ENST00000447540 ZFYVE27Q5T4F4 411 aa3.2□□□□□ -1.9
CHD9-203ENST00000447540 CCDC125Q86Z20 511 aa3.2□□□□□ -1.9
CHD9-203ENST00000447540 CD302Q8IX05 232 aa3.2□□□□□ -1.9
CHD9-203ENST00000447540 ZFRQ96KR1 1074 aaKnown RBP3.2□□□□□ -1.9
CHD9-203ENST00000447540 SLC40A1Q9NP59 571 aa3.2□□□□□ -1.9
CHD9-203ENST00000447540 KIAA1468Q9P260 1216 aa3.2□□□□□ -1.9
CHD9-203ENST00000447540 HERC5Q9UII4 1024 aaKnown RBP3.2□□□□□ -1.9
CHD9-203ENST00000447540 RASAL2Q9UJF2 1139 aa3.2□□□□□ -1.9
CHD9-203ENST00000447540 PPP2R2CQ9Y2T4 447 aa3.2□□□□□ -1.9
CHD9-203ENST00000447540 CPLX1O14810 134 aa3.2□□□□□ -1.9
CHD9-203ENST00000447540 PER1O15534 1290 aaPredicted RBP3.2□□□□□ -1.9
CHD9-203ENST00000447540 MAP3K7O43318 606 aa3.2□□□□□ -1.9
CHD9-203ENST00000447540 BCAR3O75815 825 aa3.2□□□□□ -1.9
CHD9-203ENST00000447540 ZNF189O75820 626 aaPredicted RBP3.2□□□□□ -1.9
CHD9-203ENST00000447540 KRT75O95678 551 aa3.2□□□□□ -1.9
CHD9-203ENST00000447540 RHOXF2BP0C7M4 288 aa3.2□□□□□ -1.9
CHD9-203ENST00000447540 ZNF12P17014 697 aa3.2□□□□□ -1.9
CHD9-203ENST00000447540 MCCD1P59942 119 aaPredicted RBP3.2□□□□□ -1.9
CHD9-203ENST00000447540 VSIG1Q86XK7 387 aa3.2□□□□□ -1.9
CHD9-203ENST00000447540 IGSF22Q8N9C0 903 aa3.2□□□□□ -1.9
CHD9-203ENST00000447540 ZBTB8BQ8NAP8 495 aaPredicted RBP3.2□□□□□ -1.9
CHD9-203ENST00000447540 RHOXF2Q9BQY4 288 aa3.2□□□□□ -1.9
CHD9-203ENST00000447540 NKIRAS1Q9NYS0 192 aa3.2□□□□□ -1.9
CHD9-203ENST00000447540 NUP155O75694 1391 aa3.2□□□□□ -1.9
CHD9-203ENST00000447540 ECE1P42892 770 aa3.2□□□□□ -1.9
CHD9-203ENST00000447540 GYS2P54840 703 aa3.2□□□□□ -1.9
CHD9-203ENST00000447540 HDAC4P56524 1084 aa3.2□□□□□ -1.9
CHD9-203ENST00000447540 NANOGNBQ7Z5D8 188 aa3.2□□□□□ -1.9
CHD9-203ENST00000447540 REXO1L1PQ8IX06 675 aa3.2□□□□□ -1.9
CHD9-203ENST00000447540 CCDC89Q8N998 374 aa3.2□□□□□ -1.9
CHD9-203ENST00000447540 LRRC8CQ8TDW0 803 aa3.2□□□□□ -1.9
CHD9-203ENST00000447540 CD209Q9NNX6 404 aa3.2□□□□□ -1.9
CHD9-203ENST00000447540 CNGB3Q9NQW8 809 aa3.2□□□□□ -1.9
CHD9-203ENST00000447540 FKBP14Q9NWM8 211 aa3.2□□□□□ -1.9
CHD9-203ENST00000447540 CABP1Q9NZU7 370 aa3.2□□□□□ -1.9
CHD9-203ENST00000447540 ATPIF1Q9UII2 106 aa3.2□□□□□ -1.9
CHD9-203ENST00000447540 GTF3C4Q9UKN8 822 aa3.2□□□□□ -1.9
CHD9-203ENST00000447540 CCT8L1PA6NM43 557 aa3.2□□□□□ -1.9
CHD9-203ENST00000447540 CCDC188H7C350 402 aa3.2□□□□□ -1.9
CHD9-203ENST00000447540 ADCY1Q08828 1119 aa3.2□□□□□ -1.9
CHD9-203ENST00000447540 ZNF268Q14587 947 aaPredicted RBP3.2□□□□□ -1.9
CHD9-203ENST00000447540 AGBL2Q5U5Z8 902 aa3.2□□□□□ -1.9
CHD9-203ENST00000447540 HVCN1Q96D96 273 aa3.2□□□□□ -1.9
CHD9-203ENST00000447540 AGBL1Q96MI9 1066 aa3.2□□□□□ -1.9
CHD9-203ENST00000447540 NCKAP5LQ9HCH0 1330 aa3.2□□□□□ -1.9
CHD9-203ENST00000447540 MROH1Q8NDA8 1641 aa3.2□□□□□ -1.9
CHD9-203ENST00000447540 NINQ8N4C6 2090 aa3.2□□□□□ -1.9
CHD9-203ENST00000447540 IFIT3O14879 490 aaKnown RBP3.2□□□□□ -1.9
CHD9-203ENST00000447540 STIP1P31948 543 aaKnown RBP3.2□□□□□ -1.9
CHD9-203ENST00000447540 SERPINB4P48594 390 aa3.2□□□□□ -1.9
CHD9-203ENST00000447540 POLE2P56282 527 aa3.2□□□□□ -1.9
CHD9-203ENST00000447540 SPDYAQ5MJ70 313 aa3.2□□□□□ -1.9
CHD9-203ENST00000447540 WASHC2DQ5SRD0 308 aa3.2□□□□□ -1.9
CHD9-203ENST00000447540 DENND2CQ68D51 928 aa3.2□□□□□ -1.9
CHD9-203ENST00000447540 ADALQ6DHV7 355 aa3.2□□□□□ -1.9
CHD9-203ENST00000447540 OLFML1Q6UWY5 402 aa3.2□□□□□ -1.9
CHD9-203ENST00000447540 ZNF662Q6ZS27 426 aa3.2□□□□□ -1.9
CHD9-203ENST00000447540 NLRP14Q86W24 1093 aa3.2□□□□□ -1.9
CHD9-203ENST00000447540 ATL2Q8NHH9 583 aa3.2□□□□□ -1.9
CHD9-203ENST00000447540 ZC3H15Q8WU90 426 aaKnown RBP3.2□□□□□ -1.9
CHD9-203ENST00000447540 DNAJC9Q8WXX5 260 aa3.2□□□□□ -1.9
CHD9-203ENST00000447540 RSL24D1Q9UHA3 163 aaKnown RBP3.2□□□□□ -1.9
CHD9-203ENST00000447540 ATP10AO60312 1499 aa3.2□□□□□ -1.9
CHD9-203ENST00000447540 ABCA10Q8WWZ4 1543 aa3.2□□□□□ -1.9
CHD9-203ENST00000447540 F8VZ95 297 aa3.2□□□□□ -1.9
CHD9-203ENST00000447540 RGL2O15211 777 aa3.2□□□□□ -1.9
CHD9-203ENST00000447540 PHACTR2O75167 634 aa3.2□□□□□ -1.9
CHD9-203ENST00000447540 VHLP40337 213 aa3.2□□□□□ -1.9
CHD9-203ENST00000447540 STX1BP61266 288 aa3.2□□□□□ -1.9
CHD9-203ENST00000447540 LACTB2Q53H82 288 aaPredicted RBP3.2□□□□□ -1.9
CHD9-203ENST00000447540 CCDC62Q6P9F0 684 aa3.2□□□□□ -1.9
CHD9-203ENST00000447540 KIAA0825Q8IV33 1275 aa3.2□□□□□ -1.9
CHD9-203ENST00000447540 ATP8B4Q8TF62 1192 aa3.2□□□□□ -1.9
CHD9-203ENST00000447540 BUD13Q9BRD0 619 aaKnown RBP eCLIP3.2□□□□□ -1.93e-6■■■□□ 19.2
CHD9-203ENST00000447540 OSBPL1AQ9BXW6 950 aa3.2□□□□□ -1.9
CHD9-203ENST00000447540 TRAF3IP3Q9Y228 551 aa3.2□□□□□ -1.9
CHD9-203ENST00000447540 PARP3Q9Y6F1 533 aa3.2□□□□□ -1.9
CHD9-203ENST00000447540 MYH7BA7E2Y1 1941 aa3.2□□□□□ -1.9
CHD9-203ENST00000447540 N4BP3O15049 544 aa3.19□□□□□ -1.9
CHD9-203ENST00000447540 TMTC3Q6ZXV5 915 aa3.19□□□□□ -1.9
CHD9-203ENST00000447540 CCDC84Q86UT8 332 aaPredicted RBP3.19□□□□□ -1.9
CHD9-203ENST00000447540 DQX1Q8TE96 717 aaKnown RBP3.19□□□□□ -1.9
CHD9-203ENST00000447540 AFG1LQ8WV93 481 aa3.19□□□□□ -1.9
CHD9-203ENST00000447540 RAPGEF4Q8WZA2 1011 aa3.19□□□□□ -1.9
CHD9-203ENST00000447540 MAML1Q92585 1016 aa3.19□□□□□ -1.9
CHD9-203ENST00000447540 CAVIN3Q969G5 261 aa3.19□□□□□ -1.9
CHD9-203ENST00000447540 ABHD8Q96I13 439 aa3.19□□□□□ -1.9
CHD9-203ENST00000447540 RBM17Q96I25 401 aaKnown RBP3.19□□□□□ -1.9
CHD9-203ENST00000447540 ESYT1Q9BSJ8 1104 aa3.19□□□□□ -1.9
CHD9-203ENST00000447540 UNKQ9C0B0 810 aaKnown RBP3.19□□□□□ -1.9
CHD9-203ENST00000447540 MOV10Q9HCE1 1003 aaKnown RBP3.19□□□□□ -1.9
CHD9-203ENST00000447540 GID8Q9NWU2 228 aa3.19□□□□□ -1.9
CHD9-203ENST00000447540 STK26Q9P289 416 aa3.19□□□□□ -1.9
CHD9-203ENST00000447540 PLA2R1Q13018 1463 aa3.19□□□□□ -1.9
CHD9-203ENST00000447540 SHANK2Q9UPX8 1470 aa3.19□□□□□ -1.9
CHD9-203ENST00000447540 POTEFA5A3E0 1075 aa3.19□□□□□ -1.9
CHD9-203ENST00000447540 ATP5BP06576 529 aaKnown RBP3.19□□□□□ -1.9
CHD9-203ENST00000447540 ATP6V1C1P21283 382 aa3.19□□□□□ -1.9
CHD9-203ENST00000447540 CCNG1P51959 295 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms